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Genome Sequences of 12 Pseudomonas lundensis Strains Isolated from the Lungs of Humans.

Scales BS, Erb-Downward JR, Falkowski NR, LiPuma JJ, Huffnagle GB.

Genome Announc. 2018 Feb 15;6(7). pii: e01461-17. doi: 10.1128/genomeA.01461-17.


A tale of two sites: how inflammation can reshape the microbiomes of the gut and lungs.

Scales BS, Dickson RP, Huffnagle GB.

J Leukoc Biol. 2016 Nov;100(5):943-950. Epub 2016 Jun 30. Review.


Comparative genomics of Pseudomonas fluorescens subclade III strains from human lungs.

Scales BS, Erb-Downward JR, Huffnagle IM, LiPuma JJ, Huffnagle GB.

BMC Genomics. 2015 Dec 7;16:1032. doi: 10.1186/s12864-015-2261-2.


Draft Genome Sequences of Five Pseudomonas fluorescens Subclade I and II Strains, Isolated from Human Respiratory Samples.

Scales BS, Erb-Downward JR, LiPuma JJ, Huffnagle GB.

Genome Announc. 2015 Jul 30;3(4). pii: e00837-15. doi: 10.1128/genomeA.00837-15.


Draft Genome Sequences of Seven Pseudomonas fluorescens Subclade III Strains Isolated from Cystic Fibrosis Patients.

Scales BS, Erb-Downward JR, Huffnagle IM, LiPuma JJ, Huffnagle GB.

Genome Announc. 2015 Jan 29;3(1). pii: e01285-14. doi: 10.1128/genomeA.01285-14.


Microbiology, genomics, and clinical significance of the Pseudomonas fluorescens species complex, an unappreciated colonizer of humans.

Scales BS, Dickson RP, LiPuma JJ, Huffnagle GB.

Clin Microbiol Rev. 2014 Oct;27(4):927-48. doi: 10.1128/CMR.00044-14. Review.


Changes in the lung microbiome following lung transplantation include the emergence of two distinct Pseudomonas species with distinct clinical associations.

Dickson RP, Erb-Downward JR, Freeman CM, Walker N, Scales BS, Beck JM, Martinez FJ, Curtis JL, Lama VN, Huffnagle GB.

PLoS One. 2014 May 15;9(5):e97214. doi: 10.1371/journal.pone.0097214. eCollection 2014.


The microbiome in wound repair and tissue fibrosis.

Scales BS, Huffnagle GB.

J Pathol. 2013 Jan;229(2):323-31. doi: 10.1002/path.4118. Epub 2012 Nov 29. Review.

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