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Items: 1 to 50 of 68

1.

Minor Effect of Antibiotic Pre-treatment on the Engraftment of Donor Microbiota in Fecal Transplantation in Mice.

Freitag TL, Hartikainen A, Jouhten H, Sahl C, Meri S, Anttila VJ, Mattila E, Arkkila P, Jalanka J, Satokari R.

Front Microbiol. 2019 Nov 21;10:2685. doi: 10.3389/fmicb.2019.02685. eCollection 2019.

2.

International consensus conference on stool banking for faecal microbiota transplantation in clinical practice.

Cammarota G, Ianiro G, Kelly CR, Mullish BH, Allegretti JR, Kassam Z, Putignani L, Fischer M, Keller JJ, Costello SP, Sokol H, Kump P, Satokari R, Kahn SA, Kao D, Arkkila P, Kuijper EJ, Vehreschild MJG, Pintus C, Lopetuso L, Masucci L, Scaldaferri F, Terveer EM, Nieuwdorp M, López-Sanromán A, Kupcinskas J, Hart A, Tilg H, Gasbarrini A.

Gut. 2019 Dec;68(12):2111-2121. doi: 10.1136/gutjnl-2019-319548. Epub 2019 Sep 28. Review.

3.

Modulation of Gut Microbiota for Health by Current and Next-Generation Probiotics.

Satokari R.

Nutrients. 2019 Aug 15;11(8). pii: E1921. doi: 10.3390/nu11081921.

4.

Universal membrane-labeling combined with expression of Katushka far-red fluorescent protein enables non-invasive dynamic and longitudinal quantitative 3D dual-color fluorescent imaging of multiple bacterial strains in mouse intestine.

Peñate-Medina O, Tower RJ, Peñate-Medina T, Will O, Saris PEJ, Suojanen J, Sorsa T, Huuskonen L, Hiippala K, Satokari R, Glüer CC, de Vos WM, Reunanen J.

BMC Microbiol. 2019 Jul 18;19(1):167. doi: 10.1186/s12866-019-1538-z.

5.

Growth Mode and Carbon Source Impact the Surfaceome Dynamics of Lactobacillus rhamnosus GG.

Savijoki K, Nyman TA, Kainulainen V, Miettinen I, Siljamäki P, Fallarero A, Sandholm J, Satokari R, Varmanen P.

Front Microbiol. 2019 Jun 5;10:1272. doi: 10.3389/fmicb.2019.01272. eCollection 2019.

6.

Long-term colonisation with donor bacteriophages following successful faecal microbial transplantation.

Draper LA, Ryan FJ, Smith MK, Jalanka J, Mattila E, Arkkila PA, Ross RP, Satokari R, Hill C.

Microbiome. 2018 Dec 10;6(1):220. doi: 10.1186/s40168-018-0598-x.

7.

Understanding mode of action can drive the translational pipeline towards more reliable health benefits for probiotics.

Kleerebezem M, Binda S, Bron PA, Gross G, Hill C, van Hylckama Vlieg JE, Lebeer S, Satokari R, Ouwehand AC.

Curr Opin Biotechnol. 2019 Apr;56:55-60. doi: 10.1016/j.copbio.2018.09.007. Epub 2018 Oct 5. Review.

8.

Maternal gut and breast milk microbiota affect infant gut antibiotic resistome and mobile genetic elements.

Pärnänen K, Karkman A, Hultman J, Lyra C, Bengtsson-Palme J, Larsson DGJ, Rautava S, Isolauri E, Salminen S, Kumar H, Satokari R, Virta M.

Nat Commun. 2018 Sep 24;9(1):3891. doi: 10.1038/s41467-018-06393-w.

9.

Publisher Correction: The composition of the perinatal intestinal microbiota in cattle.

Alipour MJ, Jalanka J, Pessa-Morikawa T, Kokkonen T, Satokari R, Hynönen U, Iivanainen A, Niku M.

Sci Rep. 2018 Sep 11;8(1):13792. doi: 10.1038/s41598-018-31494-3.

10.

The Potential of Gut Commensals in Reinforcing Intestinal Barrier Function and Alleviating Inflammation.

Hiippala K, Jouhten H, Ronkainen A, Hartikainen A, Kainulainen V, Jalanka J, Satokari R.

Nutrients. 2018 Jul 29;10(8). pii: E988. doi: 10.3390/nu10080988. Review.

11.

The composition of the perinatal intestinal microbiota in cattle.

Alipour MJ, Jalanka J, Pessa-Morikawa T, Kokkonen T, Satokari R, Hynönen U, Iivanainen A, Niku M.

Sci Rep. 2018 Jul 11;8(1):10437. doi: 10.1038/s41598-018-28733-y. Erratum in: Sci Rep. 2018 Sep 11;8(1):13792.

12.

Letter: improvements in mental health after faecal microbiota transplantation-an underexplored treatment-related benefit? Authors' reply.

Jalanka J, Hillamaa A, Arkkila PE, Satokari R.

Aliment Pharmacol Ther. 2018 Jun;47(11):1563-1564. doi: 10.1111/apt.14668. No abstract available.

13.

The long-term effects of faecal microbiota transplantation for gastrointestinal symptoms and general health in patients with recurrent Clostridium difficile infection.

Jalanka J, Hillamaa A, Satokari R, Mattila E, Anttila VJ, Arkkila P.

Aliment Pharmacol Ther. 2018 Feb;47(3):371-379. doi: 10.1111/apt.14443. Epub 2017 Dec 11.

14.

Faecal microbiota transplantation in patients with Clostridium difficile and significant comorbidities as well as in patients with new indications: A case series.

Lahtinen P, Mattila E, Anttila VJ, Tillonen J, Teittinen M, Nevalainen P, Salminen S, Satokari R, Arkkila P.

World J Gastroenterol. 2017 Oct 21;23(39):7174-7184. doi: 10.3748/wjg.v23.i39.7174.

15.

Feasibility of Metatranscriptome Analysis from Infant Gut Microbiota: Adaptation to Solid Foods Results in Increased Activity of Firmicutes at Six Months.

Hugenholtz F, Ritari J, Nylund L, Davids M, Satokari R, de Vos WM.

Int J Microbiol. 2017;2017:9547063. doi: 10.1155/2017/9547063. Epub 2017 Aug 24.

16.

Pili-like proteins of Akkermansia muciniphila modulate host immune responses and gut barrier function.

Ottman N, Reunanen J, Meijerink M, Pietilä TE, Kainulainen V, Klievink J, Huuskonen L, Aalvink S, Skurnik M, Boeren S, Satokari R, Mercenier A, Palva A, Smidt H, de Vos WM, Belzer C.

PLoS One. 2017 Mar 1;12(3):e0173004. doi: 10.1371/journal.pone.0173004. eCollection 2017.

17.

European consensus conference on faecal microbiota transplantation in clinical practice.

Cammarota G, Ianiro G, Tilg H, Rajilić-Stojanović M, Kump P, Satokari R, Sokol H, Arkkila P, Pintus C, Hart A, Segal J, Aloi M, Masucci L, Molinaro A, Scaldaferri F, Gasbarrini G, Lopez-Sanroman A, Link A, de Groot P, de Vos WM, Högenauer C, Malfertheiner P, Mattila E, Milosavljević T, Nieuwdorp M, Sanguinetti M, Simren M, Gasbarrini A; European FMT Working Group.

Gut. 2017 Apr;66(4):569-580. doi: 10.1136/gutjnl-2016-313017. Epub 2017 Jan 13.

18.

Consensus report: faecal microbiota transfer - clinical applications and procedures.

König J, Siebenhaar A, Högenauer C, Arkkila P, Nieuwdorp M, Norén T, Ponsioen CY, Rosien U, Rossen NG, Satokari R, Stallmach A, de Vos W, Keller J, Brummer RJ.

Aliment Pharmacol Ther. 2017 Jan;45(2):222-239. doi: 10.1111/apt.13868. Epub 2016 Nov 27. Review.

19.

Mucosal Prevalence and Interactions with the Epithelium Indicate Commensalism of Sutterella spp.

Hiippala K, Kainulainen V, Kalliomäki M, Arkkila P, Satokari R.

Front Microbiol. 2016 Oct 26;7:1706. eCollection 2016.

20.
21.

Lactobacillus rhamnosus GG Outcompetes Enterococcus faecium via Mucus-Binding Pili: Evidence for a Novel and Heterospecific Probiotic Mechanism.

Tytgat HL, Douillard FP, Reunanen J, Rasinkangas P, Hendrickx AP, Laine PK, Paulin L, Satokari R, de Vos WM.

Appl Environ Microbiol. 2016 Sep 16;82(19):5756-62. doi: 10.1128/AEM.01243-16. Print 2016 Oct 1.

22.

Reduction of Antibiotic Resistance Genes in Intestinal Microbiota of Patients With Recurrent Clostridium difficile Infection After Fecal Microbiota Transplantation.

Jouhten H, Mattila E, Arkkila P, Satokari R.

Clin Infect Dis. 2016 Sep 1;63(5):710-1. doi: 10.1093/cid/ciw390. Epub 2016 Jun 17. No abstract available.

PMID:
27317794
23.

Probiotic Gut Microbiota Isolate Interacts with Dendritic Cells via Glycosylated Heterotrimeric Pili.

Tytgat HL, van Teijlingen NH, Sullan RM, Douillard FP, Rasinkangas P, Messing M, Reunanen J, Satokari R, Vanderleyden J, Dufrêne YF, Geijtenbeek TB, de Vos WM, Lebeer S.

PLoS One. 2016 Mar 17;11(3):e0151824. doi: 10.1371/journal.pone.0151824. eCollection 2016.

24.

Isolation and whole genome sequencing of a Ruminococcus-like bacterium, associated with irritable bowel syndrome.

Hynönen U, Rasinkangas P, Satokari R, Paulin L, de Vos WM, Pietilä TE, Kant R, Palva A.

Anaerobe. 2016 Jun;39:60-7. doi: 10.1016/j.anaerobe.2016.03.001. Epub 2016 Mar 2.

PMID:
26946362
25.

Discordant temporal development of bacterial phyla and the emergence of core in the fecal microbiota of young children.

Cheng J, Ringel-Kulka T, Heikamp-de Jong I, Ringel Y, Carroll I, de Vos WM, Salojärvi J, Satokari R.

ISME J. 2016 Apr;10(4):1002-14. doi: 10.1038/ismej.2015.177. Epub 2015 Oct 2.

26.

Editorial: a simple faecal preparation for faecal microbiota transplantation--authors' reply.

Satokari R, Mattila E, Kainulainen V, Arkkila PE.

Aliment Pharmacol Ther. 2015 Feb;41(3):321. doi: 10.1111/apt.13045. No abstract available.

27.

Genome Sequence of the Butyrate-Producing Anaerobic Bacterium Anaerostipes hadrus PEL 85.

Kant R, Rasinkangas P, Satokari R, Pietilä TE, Palva A.

Genome Announc. 2015 Apr 2;3(2). pii: e00224-15. doi: 10.1128/genomeA.00224-15.

28.

Akkermansia muciniphila Adheres to Enterocytes and Strengthens the Integrity of the Epithelial Cell Layer.

Reunanen J, Kainulainen V, Huuskonen L, Ottman N, Belzer C, Huhtinen H, de Vos WM, Satokari R.

Appl Environ Microbiol. 2015 Jun;81(11):3655-62. doi: 10.1128/AEM.04050-14. Epub 2015 Mar 20.

29.

The canine isolate Lactobacillus acidophilus LAB20 adheres to intestinal epithelium and attenuates LPS-induced IL-8 secretion of enterocytes in vitro.

Kainulainen V, Tang Y, Spillmann T, Kilpinen S, Reunanen J, Saris PE, Satokari R.

BMC Microbiol. 2015 Jan 16;15:4. doi: 10.1186/s12866-014-0337-9.

30.

Lactobacillus rhamnosus GG and its SpaC pilus adhesin modulate inflammatory responsiveness and TLR-related gene expression in the fetal human gut.

Ganguli K, Collado MC, Rautava J, Lu L, Satokari R, von Ossowski I, Reunanen J, de Vos WM, Palva A, Isolauri E, Salminen S, Walker WA, Rautava S.

Pediatr Res. 2015 Apr;77(4):528-35. doi: 10.1038/pr.2015.5. Epub 2015 Jan 12.

31.

Fecal transplantation treatment of antibiotic-induced, noninfectious colitis and long-term microbiota follow-up.

Satokari R, Fuentes S, Mattila E, Jalanka J, de Vos WM, Arkkila P.

Case Rep Med. 2014;2014:913867. doi: 10.1155/2014/913867. Epub 2014 Nov 19.

32.

Contentious host-microbiota relationship in inflammatory bowel disease--can foes become friends again?

Satokari R.

Scand J Gastroenterol. 2015 Jan;50(1):34-42. doi: 10.3109/00365521.2014.966320. Review.

PMID:
25523554
33.

Severity of atopic disease inversely correlates with intestinal microbiota diversity and butyrate-producing bacteria.

Nylund L, Nermes M, Isolauri E, Salminen S, de Vos WM, Satokari R.

Allergy. 2015 Feb;70(2):241-4. doi: 10.1111/all.12549.

PMID:
25413686
34.

Simple faecal preparation and efficacy of frozen inoculum in faecal microbiota transplantation for recurrent Clostridium difficile infection--an observational cohort study.

Satokari R, Mattila E, Kainulainen V, Arkkila PE.

Aliment Pharmacol Ther. 2015 Jan;41(1):46-53. doi: 10.1111/apt.13009. Epub 2014 Oct 29.

35.

Intestinal microbiota during early life - impact on health and disease.

Nylund L, Satokari R, Salminen S, de Vos WM.

Proc Nutr Soc. 2014 Nov;73(4):457-69. doi: 10.1017/S0029665114000627. Epub 2014 Jun 5.

PMID:
24902044
36.

Immunostimulatory CpG motifs in the genomes of gut bacteria and their role in human health and disease.

Kant R, de Vos WM, Palva A, Satokari R.

J Med Microbiol. 2014 Feb;63(Pt 2):293-308. doi: 10.1099/jmm.0.064220-0. Epub 2013 Nov 19.

PMID:
24255136
37.

BopA does not have a major role in the adhesion of Bifidobacterium bifidum to intestinal epithelial cells, extracellular matrix proteins, and mucus.

Kainulainen V, Reunanen J, Hiippala K, Guglielmetti S, Vesterlund S, Palva A, Satokari R.

Appl Environ Microbiol. 2013 Nov;79(22):6989-97. doi: 10.1128/AEM.01993-13. Epub 2013 Sep 6.

38.

Comparative genomic and functional analysis of 100 Lactobacillus rhamnosus strains and their comparison with strain GG.

Douillard FP, Ribbera A, Kant R, Pietilä TE, Järvinen HM, Messing M, Randazzo CL, Paulin L, Laine P, Ritari J, Caggia C, Lähteinen T, Brouns SJ, Satokari R, von Ossowski I, Reunanen J, Palva A, de Vos WM.

PLoS Genet. 2013;9(8):e1003683. doi: 10.1371/journal.pgen.1003683. Epub 2013 Aug 15.

39.

Duodenal microbiota composition and mucosal homeostasis in pediatric celiac disease.

Cheng J, Kalliomäki M, Heilig HG, Palva A, Lähteenoja H, de Vos WM, Salojärvi J, Satokari R.

BMC Gastroenterol. 2013 Jul 11;13:113. doi: 10.1186/1471-230X-13-113.

40.

Intestinal microbiota in healthy U.S. young children and adults--a high throughput microarray analysis.

Ringel-Kulka T, Cheng J, Ringel Y, Salojärvi J, Carroll I, Palva A, de Vos WM, Satokari R.

PLoS One. 2013 May 23;8(5):e64315. doi: 10.1371/journal.pone.0064315. Print 2013.

41.

Using recombinant Lactococci as an approach to dissect the immunomodulating capacity of surface piliation in probiotic Lactobacillus rhamnosus GG.

von Ossowski I, Pietilä TE, Rintahaka J, Nummenmaa E, Mäkinen VM, Reunanen J, Satokari R, de Vos WM, Palva I, Palva A.

PLoS One. 2013 May 14;8(5):e64416. doi: 10.1371/journal.pone.0064416. Print 2013.

42.

Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease.

Nylund L, Satokari R, Nikkilä J, Rajilić-Stojanović M, Kalliomäki M, Isolauri E, Salminen S, de Vos WM.

BMC Microbiol. 2013 Jan 23;13:12. doi: 10.1186/1471-2180-13-12.

43.

Comparative genomic and functional analysis of Lactobacillus casei and Lactobacillus rhamnosus strains marketed as probiotics.

Douillard FP, Ribbera A, Järvinen HM, Kant R, Pietilä TE, Randazzo C, Paulin L, Laine PK, Caggia C, von Ossowski I, Reunanen J, Satokari R, Salminen S, Palva A, de Vos WM.

Appl Environ Microbiol. 2013 Mar;79(6):1923-33. doi: 10.1128/AEM.03467-12. Epub 2013 Jan 11.

44.

Interaction of Campylobacter spp. and human probiotics in chicken intestinal mucus.

Ganan M, Martinez-Rodriguez AJ, Carrascosa AV, Vesterlund S, Salminen S, Satokari R.

Zoonoses Public Health. 2013 Mar;60(2):141-8. doi: 10.1111/j.1863-2378.2012.01510.x. Epub 2012 Jun 6.

PMID:
22672405
45.

Expression of microbiota, Toll-like receptors, and their regulators in the small intestinal mucosa in celiac disease.

Kalliomäki M, Satokari R, Lähteenoja H, Vähämiko S, Grönlund J, Routi T, Salminen S.

J Pediatr Gastroenterol Nutr. 2012 Jun;54(6):727-32. doi: 10.1097/MPG.0b013e318241cfa8.

PMID:
22134550
46.

Contribution of the intestinal microbiota to human health: from birth to 100 years of age.

Cheng J, Palva AM, de Vos WM, Satokari R.

Curr Top Microbiol Immunol. 2013;358:323-46. doi: 10.1007/82_2011_189. Review.

PMID:
22094893
47.

Short-term consumption of probiotic lactobacilli has no effect on acid production of supragingival plaque.

Marttinen A, Haukioja A, Karjalainen S, Nylund L, Satokari R, Öhman C, Holgerson P, Twetman S, Söderling E.

Clin Oral Investig. 2012 Jun;16(3):797-803. doi: 10.1007/s00784-011-0584-1. Epub 2011 Jul 6.

PMID:
21732090
48.

Functional characterization of a mucus-specific LPXTG surface adhesin from probiotic Lactobacillus rhamnosus GG.

von Ossowski I, Satokari R, Reunanen J, Lebeer S, De Keersmaecker SC, Vanderleyden J, de Vos WM, Palva A.

Appl Environ Microbiol. 2011 Jul;77(13):4465-72. doi: 10.1128/AEM.02497-10. Epub 2011 May 20.

49.

Semi-automated extraction of microbial DNA from feces for qPCR and phylogenetic microarray analysis.

Nylund L, Heilig HG, Salminen S, de Vos WM, Satokari R.

J Microbiol Methods. 2010 Nov;83(2):231-5. doi: 10.1016/j.mimet.2010.09.003. Epub 2010 Sep 16.

PMID:
20849891
50.

Through ageing, and beyond: gut microbiota and inflammatory status in seniors and centenarians.

Biagi E, Nylund L, Candela M, Ostan R, Bucci L, Pini E, Nikkïla J, Monti D, Satokari R, Franceschi C, Brigidi P, De Vos W.

PLoS One. 2010 May 17;5(5):e10667. doi: 10.1371/journal.pone.0010667. Erratum in: PLoS One. 2010;5(6). doi: 10.1371/annotation/df45912f-d15c-44ab-8312-e7ec0607604d.

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