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Items: 1 to 50 of 55

1.

Role of the membrane potential in mitochondrial protein unfolding and import.

Sato TK, Kawano S, Endo T.

Sci Rep. 2019 May 21;9(1):7637. doi: 10.1038/s41598-019-44152-z.

2.

Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast.

Myers KS, Riley NM, MacGilvray ME, Sato TK, McGee M, Heilberger J, Coon JJ, Gasch AP.

PLoS Genet. 2019 Mar 11;15(3):e1008037. doi: 10.1371/journal.pgen.1008037. eCollection 2019 Mar.

3.

First Ionization Potentials of Fm, Md, No, and Lr: Verification of Filling-Up of 5f Electrons and Confirmation of the Actinide Series.

Sato TK, Asai M, Borschevsky A, Beerwerth R, Kaneya Y, Makii H, Mitsukai A, Nagame Y, Osa A, Toyoshima A, Tsukada K, Sakama M, Takeda S, Ooe K, Sato D, Shigekawa Y, Ichikawa SI, Düllmann CE, Grund J, Renisch D, Kratz JV, Schädel M, Eliav E, Kaldor U, Fritzsche S, Stora T.

J Am Chem Soc. 2018 Nov 7;140(44):14609-14613. doi: 10.1021/jacs.8b09068. Epub 2018 Oct 25.

PMID:
30358998
4.

Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast.

Higgins DA, Young MKM, Tremaine M, Sardi M, Fletcher JM, Agnew M, Liu L, Dickinson Q, Peris D, Wrobel RL, Hittinger CT, Gasch AP, Singer SW, Simmons BA, Landick R, Thelen MP, Sato TK.

Genetics. 2018 Sep;210(1):219-234. doi: 10.1534/genetics.118.301161. Epub 2018 Jul 25.

5.

Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032.

Yang S, Vera JM, Grass J, Savvakis G, Moskvin OV, Yang Y, McIlwain SJ, Lyu Y, Zinonos I, Hebert AS, Coon JJ, Bates DM, Sato TK, Brown SD, Himmel ME, Zhang M, Landick R, Pappas KM, Zhang Y.

Biotechnol Biofuels. 2018 May 2;11:125. doi: 10.1186/s13068-018-1116-x. eCollection 2018.

6.

Streamlined sensory motor communication through cortical reciprocal connectivity in a visually guided eye movement task.

Itokazu T, Hasegawa M, Kimura R, Osaki H, Albrecht UR, Sohya K, Chakrabarti S, Itoh H, Ito T, Sato TK, Sato TR.

Nat Commun. 2018 Jan 23;9(1):338. doi: 10.1038/s41467-017-02501-4.

7.

Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production.

Peris D, Moriarty RV, Alexander WG, Baker E, Sylvester K, Sardi M, Langdon QK, Libkind D, Wang QM, Bai FY, Leducq JB, Charron G, Landry CR, Sampaio JP, Gonçalves P, Hyma KE, Fay JC, Sato TK, Hittinger CT.

Biotechnol Biofuels. 2017 Mar 27;10:78. doi: 10.1186/s13068-017-0763-7. eCollection 2017.

8.

Metabolic engineering of Saccharomyces cerevisiae to produce a reduced viscosity oil from lignocellulose.

Tran TNT, Breuer RJ, Avanasi Narasimhan R, Parreiras LS, Zhang Y, Sato TK, Durrett TP.

Biotechnol Biofuels. 2017 Mar 20;10:69. doi: 10.1186/s13068-017-0751-y. eCollection 2017.

9.

Selective Suppression of Local Circuits during Movement Preparation in the Mouse Motor Cortex.

Hasegawa M, Majima K, Itokazu T, Maki T, Albrecht UR, Castner N, Izumo M, Sohya K, Sato TK, Kamitani Y, Sato TR.

Cell Rep. 2017 Mar 14;18(11):2676-2686. doi: 10.1016/j.celrep.2017.02.043.

10.

A cell based screening approach for identifying protein degradation regulators.

Simanski S, Maloof ME, Sato TK, Cavett V, Caldwell Busby J, Ayad NG.

Cell Cycle. 2017 May 19;16(10):940-946. doi: 10.1080/15384101.2017.1301333. Epub 2017 Mar 15.

11.

Correction: Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae.

Sato TK, Tremaine M, Parreiras LS, Hebert AS, Myers KS, Higbee AJ, Sardi M, McIlwain SJ, Ong IM, Breuer RJ, Narasimhan RA, McGee MA, Dickinson Q, La Reau A, Xie D, Tian M, Piotrowski JS, Reed JL, Zhang Y, Coon JJ, Hittinger CT, Gasch AP, Landick R.

PLoS Genet. 2016 Nov 9;12(11):e1006447. doi: 10.1371/journal.pgen.1006447. eCollection 2016 Nov.

12.

Inhibition of microbial biofuel production in drought-stressed switchgrass hydrolysate.

Ong RG, Higbee A, Bottoms S, Dickinson Q, Xie D, Smith SA, Serate J, Pohlmann E, Jones AD, Coon JJ, Sato TK, Sanford GR, Eilert D, Oates LG, Piotrowski JS, Bates DM, Cavalier D, Zhang Y.

Biotechnol Biofuels. 2016 Nov 8;9:237. eCollection 2016.

13.

Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae.

Sato TK, Tremaine M, Parreiras LS, Hebert AS, Myers KS, Higbee AJ, Sardi M, McIlwain SJ, Ong IM, Breuer RJ, Avanasi Narasimhan R, McGee MA, Dickinson Q, La Reau A, Xie D, Tian M, Reed JL, Zhang Y, Coon JJ, Hittinger CT, Gasch AP, Landick R.

PLoS Genet. 2016 Oct 14;12(10):e1006372. doi: 10.1371/journal.pgen.1006372. eCollection 2016 Oct. Erratum in: PLoS Genet. 2016 Nov 9;12 (11):e1006447.

14.

Genome Sequence and Analysis of a Stress-Tolerant, Wild-Derived Strain of Saccharomyces cerevisiae Used in Biofuels Research.

McIlwain SJ, Peris D, Sardi M, Moskvin OV, Zhan F, Myers KS, Riley NM, Buzzell A, Parreiras LS, Ong IM, Landick R, Coon JJ, Gasch AP, Sato TK, Hittinger CT.

G3 (Bethesda). 2016 Jun 1;6(6):1757-66. doi: 10.1534/g3.116.029389.

15.

An excitatory basis for divisive normalization in visual cortex.

Sato TK, Haider B, Häusser M, Carandini M.

Nat Neurosci. 2016 Apr;19(4):568-70. doi: 10.1038/nn.4249. Epub 2016 Feb 15.

16.

Quantifying pretreatment degradation compounds in solution and accumulated by cells during solids and yeast recycling in the Rapid Bioconversion with Integrated recycling Technology process using AFEX™ corn stover.

Sarks C, Higbee A, Piotrowski J, Xue S, Coon JJ, Sato TK, Jin M, Balan V, Dale BE.

Bioresour Technol. 2016 Apr;205:24-33. doi: 10.1016/j.biortech.2016.01.008. Epub 2016 Jan 12.

PMID:
26802184
17.

Mechanism of imidazolium ionic liquids toxicity in Saccharomyces cerevisiae and rational engineering of a tolerant, xylose-fermenting strain.

Dickinson Q, Bottoms S, Hinchman L, McIlwain S, Li S, Myers CL, Boone C, Coon JJ, Hebert A, Sato TK, Landick R, Piotrowski JS.

Microb Cell Fact. 2016 Jan 20;15:17. doi: 10.1186/s12934-016-0417-7.

18.

Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation.

Serate J, Xie D, Pohlmann E, Donald C Jr, Shabani M, Hinchman L, Higbee A, Mcgee M, La Reau A, Klinger GE, Li S, Myers CL, Boone C, Bates DM, Cavalier D, Eilert D, Oates LG, Sanford G, Sato TK, Dale B, Landick R, Piotrowski J, Ong RG, Zhang Y.

Biotechnol Biofuels. 2015 Nov 14;8:180. doi: 10.1186/s13068-015-0356-2. eCollection 2015.

19.

Ubiquitin ligase Siah2 regulates RevErbα degradation and the mammalian circadian clock.

DeBruyne JP, Baggs JE, Sato TK, Hogenesch JB.

Proc Natl Acad Sci U S A. 2015 Oct 6;112(40):12420-5. doi: 10.1073/pnas.1501204112. Epub 2015 Sep 21.

20.

The Cholesterol-dependent Cytolysin Membrane-binding Interface Discriminates Lipid Environments of Cholesterol to Support β-Barrel Pore Insertion.

Farrand AJ, Hotze EM, Sato TK, Wade KR, Wimley WC, Johnson AE, Tweten RK.

J Biol Chem. 2015 Jul 17;290(29):17733-44. doi: 10.1074/jbc.M115.656769. Epub 2015 Jun 1.

21.

Measurement of the first ionization potential of lawrencium, element 103.

Sato TK, Asai M, Borschevsky A, Stora T, Sato N, Kaneya Y, Tsukada K, Düllmann ChE, Eberhardt K, Eliav E, Ichikawa S, Kaldor U, Kratz JV, Miyashita S, Nagame Y, Ooe K, Osa A, Renisch D, Runke J, Schädel M, Thörle-Pospiech P, Toyoshima A, Trautmann N.

Nature. 2015 Apr 9;520(7546):209-11. doi: 10.1038/nature14342.

PMID:
25855457
22.

Imaging the awake visual cortex with a genetically encoded voltage indicator.

Carandini M, Shimaoka D, Rossi LF, Sato TK, Benucci A, Knöpfel T.

J Neurosci. 2015 Jan 7;35(1):53-63. doi: 10.1523/JNEUROSCI.0594-14.2015.

23.

Comparative genomics of Saccharomyces cerevisiae natural isolates for bioenergy production.

Wohlbach DJ, Rovinskiy N, Lewis JA, Sardi M, Schackwitz WS, Martin JA, Deshpande S, Daum CG, Lipzen A, Sato TK, Gasch AP.

Genome Biol Evol. 2014 Sep;6(9):2557-66.

24.

Nuclear chemistry. Synthesis and detection of a seaborgium carbonyl complex.

Even J, Yakushev A, Düllmann ChE, Haba H, Asai M, Sato TK, Brand H, Di Nitto A, Eichler R, Fan FL, Hartmann W, Huang M, Jäger E, Kaji D, Kanaya J, Kaneya Y, Khuyagbaatar J, Kindler B, Kratz JV, Krier J, Kudou Y, Kurz N, Lommel B, Miyashita S, Morimoto K, Morita K, Murakami M, Nagame Y, Nitsche H, Ooe K, Qin Z, Schädel M, Steiner J, Sumita T, Takeyama M, Tanaka K, Toyoshima A, Tsukada K, Türler A, Usoltsev I, Wakabayashi Y, Wang Y, Wiehl N, Yamaki S.

Science. 2014 Sep 19;345(6203):1491-3. doi: 10.1126/science.1255720.

25.

Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover.

Parreiras LS, Breuer RJ, Avanasi Narasimhan R, Higbee AJ, La Reau A, Tremaine M, Qin L, Willis LB, Bice BD, Bonfert BL, Pinhancos RC, Balloon AJ, Uppugundla N, Liu T, Li C, Tanjore D, Ong IM, Li H, Pohlmann EL, Serate J, Withers ST, Simmons BA, Hodge DB, Westphall MS, Coon JJ, Dale BE, Balan V, Keating DH, Zhang Y, Landick R, Gasch AP, Sato TK.

PLoS One. 2014 Sep 15;9(9):e107499. doi: 10.1371/journal.pone.0107499. eCollection 2014.

26.

Studying the rapid bioconversion of lignocellulosic sugars into ethanol using high cell density fermentations with cell recycle.

Sarks C, Jin M, Sato TK, Balan V, Dale BE.

Biotechnol Biofuels. 2014 May 15;7:73. doi: 10.1186/1754-6834-7-73. eCollection 2014.

27.

Machine learning helps identify CHRONO as a circadian clock component.

Anafi RC, Lee Y, Sato TK, Venkataraman A, Ramanathan C, Kavakli IH, Hughes ME, Baggs JE, Growe J, Liu AC, Kim J, Hogenesch JB.

PLoS Biol. 2014 Apr 15;12(4):e1001840. doi: 10.1371/journal.pbio.1001840. eCollection 2014 Apr.

28.

Death by a thousand cuts: the challenges and diverse landscape of lignocellulosic hydrolysate inhibitors.

Piotrowski JS, Zhang Y, Bates DM, Keating DH, Sato TK, Ong IM, Landick R.

Front Microbiol. 2014 Mar 14;5:90. doi: 10.3389/fmicb.2014.00090. eCollection 2014.

29.

Distal connectivity causes summation and division across mouse visual cortex.

Sato TK, Häusser M, Carandini M.

Nat Neurosci. 2014 Jan;17(1):30-2. doi: 10.1038/nn.3585. Epub 2013 Nov 17.

30.

Harnessing genetic diversity in Saccharomyces cerevisiae for fermentation of xylose in hydrolysates of alkaline hydrogen peroxide-pretreated biomass.

Sato TK, Liu T, Parreiras LS, Williams DL, Wohlbach DJ, Bice BD, Ong IM, Breuer RJ, Qin L, Busalacchi D, Deshpande S, Daum C, Gasch AP, Hodge DB.

Appl Environ Microbiol. 2014 Jan;80(2):540-54. doi: 10.1128/AEM.01885-13. Epub 2013 Nov 8.

31.

Measurement of the Md3+/Md2+ reduction potential studied with flow electrolytic chromatography.

Toyoshima A, Li Z, Asai M, Sato N, Sato TK, Kikuchi T, Kaneya Y, Kitatsuji Y, Tsukada K, Nagame Y, Schädel M, Ooe K, Kasamatsu Y, Shinohara A, Haba H, Even J.

Inorg Chem. 2013 Nov 4;52(21):12311-3. doi: 10.1021/ic401571h. Epub 2013 Oct 11.

PMID:
24116851
32.

Effect of storage conditions on the stability and fermentability of enzymatic lignocellulosic hydrolysate.

Jin M, Bothfeld W, Austin S, Sato TK, La Reau A, Li H, Foston M, Gunawan C, LeDuc RD, Quensen JF, McGee M, Uppugundla N, Higbee A, Ranatunga R, Donald CW, Bone G, Ragauskas AJ, Tiedje JM, Noguera DR, Dale BE, Zhang Y, Balan V.

Bioresour Technol. 2013 Nov;147:212-20. doi: 10.1016/j.biortech.2013.08.018. Epub 2013 Aug 14.

PMID:
23999256
33.

Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover.

Jin M, Sarks C, Gunawan C, Bice BD, Simonett SP, Avanasi Narasimhan R, Willis LB, Dale BE, Balan V, Sato TK.

Biotechnol Biofuels. 2013 Jul 27;6:108. doi: 10.1186/1754-6834-6-108. eCollection 2013.

34.

Disulfide-bond scanning reveals assembly state and β-strand tilt angle of the PFO β-barrel.

Sato TK, Tweten RK, Johnson AE.

Nat Chem Biol. 2013 Jun;9(6):383-9. doi: 10.1038/nchembio.1228. Epub 2013 Apr 7.

35.

First successful ionization of Lr (Z = 103) by a surface-ionization technique.

Sato TK, Sato N, Asai M, Tsukada K, Toyoshima A, Ooe K, Miyashita S, Schädel M, Kaneya Y, Nagame Y, Osa A, Ichikawa S, Stora T, Kratz JV.

Rev Sci Instrum. 2013 Feb;84(2):023304. doi: 10.1063/1.4789772.

PMID:
23464201
36.

Traveling waves in visual cortex.

Sato TK, Nauhaus I, Carandini M.

Neuron. 2012 Jul 26;75(2):218-29. doi: 10.1016/j.neuron.2012.06.029. Review.

37.

Dopamine neurons learn to encode the long-term value of multiple future rewards.

Enomoto K, Matsumoto N, Nakai S, Satoh T, Sato TK, Ueda Y, Inokawa H, Haruno M, Kimura M.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15462-7. doi: 10.1073/pnas.1014457108. Epub 2011 Sep 6.

38.

Comparative genomics of xylose-fermenting fungi for enhanced biofuel production.

Wohlbach DJ, Kuo A, Sato TK, Potts KM, Salamov AA, Labutti KM, Sun H, Clum A, Pangilinan JL, Lindquist EA, Lucas S, Lapidus A, Jin M, Gunawan C, Balan V, Dale BE, Jeffries TW, Zinkel R, Barry KW, Grigoriev IV, Gasch AP.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13212-7. doi: 10.1073/pnas.1103039108. Epub 2011 Jul 25.

39.

Development of radioactive ion beam production systems for Tokai Radioactive Ion Acceleration Complex-High temperature ion source for short-lived isotopes.

Otokawa Y, Osa A, Sato TK, Matsuda M, Ichikawa S, Jeong SC.

Rev Sci Instrum. 2010 Feb;81(2):02A902. doi: 10.1063/1.3292931.

PMID:
20192400
40.

ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.

Warzecha CC, Sato TK, Nabet B, Hogenesch JB, Carstens RP.

Mol Cell. 2009 Mar 13;33(5):591-601. doi: 10.1016/j.molcel.2009.01.025.

41.

KEKCB electron cyclotron resonance charge breeder at TRIAC.

Imai N, Jeong SC, Oyaizu M, Arai S, Fuchi Y, Hirayama Y, Ishiyama H, Miyatake H, Tanaka MH, Okada M, Watanabe YX, Ichikawa S, Kabumoto H, Osa A, Otokawa Y, Sato TK.

Rev Sci Instrum. 2008 Feb;79(2 Pt 2):02A906. doi: 10.1063/1.2828070.

PMID:
18315161
42.

Feedback repression is required for mammalian circadian clock function.

Sato TK, Yamada RG, Ukai H, Baggs JE, Miraglia LJ, Kobayashi TJ, Welsh DK, Kay SA, Ueda HR, Hogenesch JB.

Nat Genet. 2006 Mar;38(3):312-9. Epub 2006 Feb 12.

43.

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.

Sato TK, Panda S, Miraglia LJ, Reyes TM, Rudic RD, McNamara P, Naik KA, FitzGerald GA, Kay SA, Hogenesch JB.

Neuron. 2004 Aug 19;43(4):527-37.

44.

Melanopsin is required for non-image-forming photic responses in blind mice.

Panda S, Provencio I, Tu DC, Pires SS, Rollag MD, Castrucci AM, Pletcher MT, Sato TK, Wiltshire T, Andahazy M, Kay SA, Van Gelder RN, Hogenesch JB.

Science. 2003 Jul 25;301(5632):525-7. Epub 2003 Jun 26.

45.

DNA arrays: applications and implications for circadian biology.

Sato TK, Panda S, Kay SA, Hogenesch JB.

J Biol Rhythms. 2003 Apr;18(2):96-105. Review.

PMID:
12693865
46.

An array of insights: application of DNA chip technology in the study of cell biology.

Panda S, Sato TK, Hampton GM, Hogenesch JB.

Trends Cell Biol. 2003 Mar;13(3):151-6. Review.

PMID:
12628348
47.

Melanopsin (Opn4) requirement for normal light-induced circadian phase shifting.

Panda S, Sato TK, Castrucci AM, Rollag MD, DeGrip WJ, Hogenesch JB, Provencio I, Kay SA.

Science. 2002 Dec 13;298(5601):2213-6.

49.

Regulation of Fab1 phosphatidylinositol 3-phosphate 5-kinase pathway by Vac7 protein and Fig4, a polyphosphoinositide phosphatase family member.

Gary JD, Sato TK, Stefan CJ, Bonangelino CJ, Weisman LS, Emr SD.

Mol Biol Cell. 2002 Apr;13(4):1238-51.

50.

Location, location, location: membrane targeting directed by PX domains.

Sato TK, Overduin M, Emr SD.

Science. 2001 Nov 30;294(5548):1881-5. Review.

PMID:
11729306

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