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Items: 1 to 50 of 77

1.

The role of ethylene in metabolic acclimations to low oxygen.

Hartman S, Sasidharan R, Voesenek LACJ.

New Phytol. 2019 Dec 19. doi: 10.1111/nph.16378. [Epub ahead of print] Review.

PMID:
31856295
2.

Keeping the shoot above water - submergence triggers antithetical growth responses in stems and petioles of watercress (Nasturtium officinale).

Müller JT, van Veen H, Bartylla MM, Akman M, Pedersen O, Sun P, Schuurink RC, Takeuchi J, Todoroki Y, Weig AR, Sasidharan R, Mustroph A.

New Phytol. 2019 Dec 2. doi: 10.1111/nph.16350. [Epub ahead of print]

PMID:
31792981
3.

Shape shifting by amphibious plants in dynamic hydrological niches.

van Veen H, Sasidharan R.

New Phytol. 2019 Nov 29. doi: 10.1111/nph.16347. [Epub ahead of print] Review.

PMID:
31782798
4.

Anti-inflammatory effect of synthesized indole-based chalcone (2E)-3-(4-bromophenyl)-1-(1H-indol-3-yl) prop-2-en-1-one: an in vitro and in vivo studies.

Sasidharan R, Sreedharannair Leelabaiamma M, Mohanan R, Jose SP, Mathew B, Sukumaran S.

Immunopharmacol Immunotoxicol. 2019 Dec;41(6):568-576. doi: 10.1080/08923973.2019.1672177. Epub 2019 Oct 8. Erratum in: Immunopharmacol Immunotoxicol. 2019 Dec;41(6):I.

PMID:
31594421
5.

Umbilical cord blood sampling versus admission blood sampling on requirement of blood transfusion in extremely preterm infants.

Sasidharan R, Yadav B, Gupta N.

J Pediatr. 2019 Dec;215:283-284. doi: 10.1016/j.jpeds.2019.08.012. Epub 2019 Sep 18. No abstract available.

PMID:
31542159
6.

Childhood Scurvy: A Nearly Extinct Disease Posing a New Diagnostic Challenge, a Case Report.

Gupta N, Toteja N, Sasidharan R, Singh K.

J Trop Pediatr. 2019 Aug 26. pii: fmz059. doi: 10.1093/tropej/fmz059. [Epub ahead of print]

PMID:
31504984
7.

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress.

Hartman S, Liu Z, van Veen H, Vicente J, Reinen E, Martopawiro S, Zhang H, van Dongen N, Bosman F, Bassel GW, Visser EJW, Bailey-Serres J, Theodoulou FL, Hebelstrup KH, Gibbs DJ, Holdsworth MJ, Sasidharan R, Voesenek LACJ.

Nat Commun. 2019 Sep 5;10(1):4020. doi: 10.1038/s41467-019-12045-4.

8.

Oral vitamin A for prevention of bronchopulmonary dysplasia.

Yadav B, Sasidharan R, Gupta N.

Eur J Pediatr. 2019 Oct;178(10):1601. doi: 10.1007/s00431-019-03448-y. Epub 2019 Sep 2. No abstract available.

PMID:
31478065
9.

Cytokinin functions as an asymmetric and anti-gravitropic signal in lateral roots.

Waidmann S, Ruiz Rosquete M, Schöller M, Sarkel E, Lindner H, LaRue T, Petřík I, Dünser K, Martopawiro S, Sasidharan R, Novak O, Wabnik K, Dinneny JR, Kleine-Vehn J.

Nat Commun. 2019 Aug 6;10(1):3540. doi: 10.1038/s41467-019-11483-4.

10.

Reducing catheter-related bloodstream infections in neonates.

Sasidharan R, Yadav B, Gupta N, Murki S.

Lancet Child Adolesc Health. 2019 Aug;3(8):e11. doi: 10.1016/S2352-4642(19)30214-7. Epub 2019 Jun 27. No abstract available.

PMID:
31257115
11.

BaCf3: highly thermostable bacteriocin from Bacillus amyloliquefaciens BTSS3 antagonistic on food-borne pathogens.

Bindiya ES, Tina KJ, Sasidharan RS, Bhat SG.

3 Biotech. 2019 Apr;9(4):136. doi: 10.1007/s13205-019-1639-2. Epub 2019 Mar 11.

PMID:
30863715
12.

After The Deluge: Plant Revival Post-Flooding.

Yeung E, Bailey-Serres J, Sasidharan R.

Trends Plant Sci. 2019 May;24(5):443-454. doi: 10.1016/j.tplants.2019.02.007. Epub 2019 Mar 9. Review.

PMID:
30857921
13.

Metabarcoding data of bacterial diversity of the deep sea shark, Centroscyllium fabricii.

Johny TK, Saidumohamed BE, Sasidharan RS, Bhat SG.

Data Brief. 2018 Oct 24;21:1029-1032. doi: 10.1016/j.dib.2018.10.062. eCollection 2018 Dec.

14.

Dopamine versus epinephrine for fluid-refractory septic shock in neonates.

Sasidharan R, Gupta N, Chawla D.

Eur J Pediatr. 2019 Jan;178(1):113-114. doi: 10.1007/s00431-018-3252-5. Epub 2018 Oct 11. No abstract available.

PMID:
30310980
15.

Imidazole bearing chalcones as a new class of monoamine oxidase inhibitors.

Sasidharan R, Baek SC, Sreedharannair Leelabaiamma M, Kim H, Mathew B.

Biomed Pharmacother. 2018 Oct;106:8-13. doi: 10.1016/j.biopha.2018.06.064. Epub 2018 Jun 23.

PMID:
29940538
16.

A stress recovery signaling network for enhanced flooding tolerance in Arabidopsis thaliana.

Yeung E, van Veen H, Vashisht D, Sobral Paiva AL, Hummel M, Rankenberg T, Steffens B, Steffen-Heins A, Sauter M, de Vries M, Schuurink RC, Bazin J, Bailey-Serres J, Voesenek LACJ, Sasidharan R.

Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):E6085-E6094. doi: 10.1073/pnas.1803841115. Epub 2018 Jun 11.

17.

Microbial modulation of plant ethylene signaling: ecological and evolutionary consequences.

Ravanbakhsh M, Sasidharan R, Voesenek LACJ, Kowalchuk GA, Jousset A.

Microbiome. 2018 Mar 21;6(1):52. doi: 10.1186/s40168-018-0436-1. Review.

18.

Signal Dynamics and Interactions during Flooding Stress.

Sasidharan R, Hartman S, Liu Z, Martopawiro S, Sajeev N, van Veen H, Yeung E, Voesenek LACJ.

Plant Physiol. 2018 Feb;176(2):1106-1117. doi: 10.1104/pp.17.01232. Epub 2017 Nov 2. Review.

19.

Transcriptomic changes in Echinochloa colona in response to treatment with the herbicide imazamox.

Wright AA, Sasidharan R, Koski L, Rodriguez-Carres M, Peterson DG, Nandula VK, Ray JD, Bond JA, Shaw DR.

Planta. 2018 Feb;247(2):369-379. doi: 10.1007/s00425-017-2784-7. Epub 2017 Oct 11.

PMID:
29022094
20.

Root Cause Analysis of Diabetic Ketoacidosis Admissions at a Tertiary Referral Pediatric Emergency Department in North India.

Jayashree M, Sasidharan R, Singhi S, Nallasamy K, Baalaaji M.

Indian J Endocrinol Metab. 2017 Sep-Oct;21(5):710-714. doi: 10.4103/ijem.IJEM_178_17.

21.

Effect of Yoga on Psychological Functioning of Nursing Students: A Randomized Wait List Control Trial.

Mathad MD, Pradhan B, Sasidharan RK.

J Clin Diagn Res. 2017 May;11(5):KC01-KC05. doi: 10.7860/JCDR/2017/26517.9833. Epub 2017 May 1.

22.

Community recommendations on terminology and procedures used in flooding and low oxygen stress research.

Sasidharan R, Bailey-Serres J, Ashikari M, Atwell BJ, Colmer TD, Fagerstedt K, Fukao T, Geigenberger P, Hebelstrup KH, Hill RD, Holdsworth MJ, Ismail AM, Licausi F, Mustroph A, Nakazono M, Pedersen O, Perata P, Sauter M, Shih MC, Sorrell BK, Striker GG, van Dongen JT, Whelan J, Xiao S, Visser EJW, Voesenek LACJ.

New Phytol. 2017 Jun;214(4):1403-1407. doi: 10.1111/nph.14519. Epub 2017 Mar 9. No abstract available.

23.

Variation in Arabidopsis flooding responses identifies numerous putative "tolerance genes".

Vashisht D, van Veen H, Akman M, Sasidharan R.

Plant Signal Behav. 2016 Nov;11(11):e1249083.

24.

An expanded evaluation of protein function prediction methods shows an improvement in accuracy.

Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SM, Martelli PL, Profiti G, Casadio R, Cao R, Zhong Z, Cheng J, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Törönen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Bkc D, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang H, Paccanaro A, Gillis J, Sedeño-Cortés AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong Q, Ning W, Zhou Y, Tian W, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SC, Del Pozo A, Fernández JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk AD, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-E-Silva DC, Vencio RZ, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJ, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P.

Genome Biol. 2016 Sep 7;17(1):184. doi: 10.1186/s13059-016-1037-6.

25.

Identification of Indole-Based Chalcones: Discovery of a Potent, Selective, and Reversible Class of MAO-B Inhibitors.

Sasidharan R, Manju SL, Uçar G, Baysal I, Mathew B.

Arch Pharm (Weinheim). 2016 Aug;349(8):627-37. doi: 10.1002/ardp.201600088. Epub 2016 Jul 4.

PMID:
27373997
26.

Ethylene- and Shade-Induced Hypocotyl Elongation Share Transcriptome Patterns and Functional Regulators.

Das D, St Onge KR, Voesenek LA, Pierik R, Sasidharan R.

Plant Physiol. 2016 Oct;172(2):718-733. Epub 2016 Jun 21.

27.

Transcriptomes of Eight Arabidopsis thaliana Accessions Reveal Core Conserved, Genotype- and Organ-Specific Responses to Flooding Stress.

van Veen H, Vashisht D, Akman M, Girke T, Mustroph A, Reinen E, Hartman S, Kooiker M, van Tienderen P, Schranz ME, Bailey-Serres J, Voesenek LA, Sasidharan R.

Plant Physiol. 2016 Oct;172(2):668-689. Epub 2016 May 15.

28.

Medial HOXA genes demarcate haematopoietic stem cell fate during human development.

Dou DR, Calvanese V, Sierra MI, Nguyen AT, Minasian A, Saarikoski P, Sasidharan R, Ramirez CM, Zack JA, Crooks GM, Galic Z, Mikkola HK.

Nat Cell Biol. 2016 Jun;18(6):595-606. doi: 10.1038/ncb3354. Epub 2016 May 16.

29.

Flooding stress signaling through perturbations in oxygen, ethylene, nitric oxide and light.

Voesenek LA, Sasidharan R, Visser EJ, Bailey-Serres J.

New Phytol. 2016 Jan;209(1):39-43. doi: 10.1111/nph.13775. No abstract available.

30.

Plant Life without Ethylene.

Voesenek LACJ, Pierik R, Sasidharan R.

Trends Plant Sci. 2015 Dec;20(12):783-786. doi: 10.1016/j.tplants.2015.10.016. Epub 2015 Nov 5.

PMID:
26547812
31.

Ethylene-Mediated Acclimations to Flooding Stress.

Sasidharan R, Voesenek LA.

Plant Physiol. 2015 Sep;169(1):3-12. doi: 10.1104/pp.15.00387. Epub 2015 Apr 20. Review.

32.

The greening after extended darkness1 is an N-end rule pathway mutant with high tolerance to submergence and starvation.

Riber W, Müller JT, Visser EJ, Sasidharan R, Voesenek LA, Mustroph A.

Plant Physiol. 2015 Apr;167(4):1616-29. doi: 10.1104/pp.114.253088. Epub 2015 Feb 9.

33.

Scl binds to primed enhancers in mesoderm to regulate hematopoietic and cardiac fate divergence.

Org T, Duan D, Ferrari R, Montel-Hagen A, Van Handel B, Kerényi MA, Sasidharan R, Rubbi L, Fujiwara Y, Pellegrini M, Orkin SH, Kurdistani SK, Mikkola HK.

EMBO J. 2015 Mar 12;34(6):759-77. doi: 10.15252/embj.201490542. Epub 2015 Jan 6.

34.

GPI-80 defines self-renewal ability in hematopoietic stem cells during human development.

Prashad SL, Calvanese V, Yao CY, Kaiser J, Wang Y, Sasidharan R, Crooks G, Magnusson M, Mikkola HK.

Cell Stem Cell. 2015 Jan 8;16(1):80-7. doi: 10.1016/j.stem.2014.10.020. Epub 2014 Nov 13.

35.

Plant responses to flooding.

Pucciariello C, Voesenek LA, Perata P, Sasidharan R.

Front Plant Sci. 2014 May 23;5:226. doi: 10.3389/fpls.2014.00226. eCollection 2014. No abstract available.

36.

Learning from nature: the use of non-model species to identify novel acclimations to flooding stress.

Voesenek LA, van Veen H, Sasidharan R.

AoB Plants. 2014 Mar 31;6. pii: plu016. doi: 10.1093/aobpla/plu016.

37.

Interactions between auxin, microtubules and XTHs mediate green shade- induced petiole elongation in arabidopsis.

Sasidharan R, Keuskamp DH, Kooke R, Voesenek LA, Pierik R.

PLoS One. 2014 Mar 4;9(3):e90587. doi: 10.1371/journal.pone.0090587. eCollection 2014.

38.

Group VII ethylene response factor diversification and regulation in four species from flood-prone environments.

van Veen H, Akman M, Jamar DC, Vreugdenhil D, Kooiker M, van Tienderen P, Voesenek LA, Schranz ME, Sasidharan R.

Plant Cell Environ. 2014 Oct;37(10):2421-32. doi: 10.1111/pce.12302. Epub 2014 Mar 19.

39.

Extreme flooding tolerance in Rorippa.

Akman M, Bhikharie A, Mustroph A, Sasidharan R.

Plant Signal Behav. 2014;9(2):e27847. Epub 2014 Feb 13.

40.

c-Met-dependent multipotent labyrinth trophoblast progenitors establish placental exchange interface.

Ueno M, Lee LK, Chhabra A, Kim YJ, Sasidharan R, Van Handel B, Wang Y, Kamata M, Kamran P, Sereti KI, Ardehali R, Jiang M, Mikkola HK.

Dev Cell. 2013 Nov 25;27(4):373-86. doi: 10.1016/j.devcel.2013.10.019.

41.

Two Rumex species from contrasting hydrological niches regulate flooding tolerance through distinct mechanisms.

van Veen H, Mustroph A, Barding GA, Vergeer-van Eijk M, Welschen-Evertman RA, Pedersen O, Visser EJ, Larive CK, Pierik R, Bailey-Serres J, Voesenek LA, Sasidharan R.

Plant Cell. 2013 Nov;25(11):4691-707. doi: 10.1105/tpc.113.119016. Epub 2013 Nov 27.

42.

Root transcript profiling of two Rorippa species reveals gene clusters associated with extreme submergence tolerance.

Sasidharan R, Mustroph A, Boonman A, Akman M, Ammerlaan AM, Breit T, Schranz ME, Voesenek LA, van Tienderen PH.

Plant Physiol. 2013 Nov;163(3):1277-92. doi: 10.1104/pp.113.222588. Epub 2013 Sep 27.

43.

Ethylene--and oxygen signalling--drive plant survival during flooding.

Voesenek LA, Sasidharan R.

Plant Biol (Stuttg). 2013 May;15(3):426-35. doi: 10.1111/plb.12014. Review.

PMID:
23574304
44.

Haemogenic endocardium contributes to transient definitive haematopoiesis.

Nakano H, Liu X, Arshi A, Nakashima Y, van Handel B, Sasidharan R, Harmon AW, Shin JH, Schwartz RJ, Conway SJ, Harvey RP, Pashmforoush M, Mikkola HK, Nakano A.

Nat Commun. 2013;4:1564. doi: 10.1038/ncomms2569.

45.

Lowland rice: high-end submergence tolerance.

Sasidharan R, Voesenek LA.

New Phytol. 2013 Mar;197(4):1029-31. doi: 10.1111/nph.12148. No abstract available.

46.

Expansion on stromal cells preserves the undifferentiated state of human hematopoietic stem cells despite compromised reconstitution ability.

Magnusson M, Sierra MI, Sasidharan R, Prashad SL, Romero M, Saarikoski P, Van Handel B, Huang A, Li X, Mikkola HK.

PLoS One. 2013;8(1):e53912. doi: 10.1371/journal.pone.0053912. Epub 2013 Jan 16.

47.

Lymphoid priming in human bone marrow begins before expression of CD10 with upregulation of L-selectin.

Kohn LA, Hao QL, Sasidharan R, Parekh C, Ge S, Zhu Y, Mikkola HK, Crooks GM.

Nat Immunol. 2012 Oct;13(10):963-71. doi: 10.1038/ni.2405. Epub 2012 Sep 2.

48.

Scl represses cardiomyogenesis in prospective hemogenic endothelium and endocardium.

Van Handel B, Montel-Hagen A, Sasidharan R, Nakano H, Ferrari R, Boogerd CJ, Schredelseker J, Wang Y, Hunter S, Org T, Zhou J, Li X, Pellegrini M, Chen JN, Orkin SH, Kurdistani SK, Evans SM, Nakano A, Mikkola HK.

Cell. 2012 Aug 3;150(3):590-605. doi: 10.1016/j.cell.2012.06.026.

49.

GFam: a platform for automatic annotation of gene families.

Sasidharan R, Nepusz T, Swarbreck D, Huala E, Paccanaro A.

Nucleic Acids Res. 2012 Oct;40(19):e152. doi: 10.1093/nar/gks631. Epub 2012 Jul 11.

50.

Reorganization of the host epigenome by a viral oncogene.

Ferrari R, Su T, Li B, Bonora G, Oberai A, Chan Y, Sasidharan R, Berk AJ, Pellegrini M, Kurdistani SK.

Genome Res. 2012 Jul;22(7):1212-21. doi: 10.1101/gr.132308.111. Epub 2012 Apr 12.

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