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Items: 1 to 50 of 65

1.

Whole-Genome Sequencing to Differentiate Relapse From Reinfection in Community-Onset Bacteremic Acinetobacter baumannii Pneumonia.

Meumann EM, Anstey NM, Currie BJ, Piera KA, Baird R, Sarovich DS, Davis JS.

Open Forum Infect Dis. 2019 Jun 1;6(7):ofz263. doi: 10.1093/ofid/ofz263. eCollection 2019 Jul.

2.

Burkholderia pseudomallei Lipopolysaccharide Genotype Does Not Correlate With Severity or Outcome in Melioidosis: Host Risk Factors Remain the Critical Determinant.

Webb JR, Sarovich DS, Price EP, Ward LM, Mayo M, Currie BJ.

Open Forum Infect Dis. 2019 Feb 25;6(4):ofz091. doi: 10.1093/ofid/ofz091. eCollection 2019 Apr.

3.

Genomic epidemiology of severe community-onset Acinetobacter baumannii infection.

Meumann EM, Anstey NM, Currie BJ, Piera KA, Kenyon JJ, Hall RM, Davis JS, Sarovich DS.

Microb Genom. 2019 Mar;5(3). doi: 10.1099/mgen.0.000258. Epub 2019 Feb 26.

4.

The Scourge of Antibiotic-resistant Infections in Cystic Fibrosis.

Price EP, Sarovich DS.

Trends Microbiol. 2019 Apr;27(4):289-291. doi: 10.1016/j.tim.2019.01.003. Epub 2019 Jan 29.

PMID:
30709708
5.

Burkholderia pseudomallei distribution in Australasia is linked to paleogeographic and anthropogenic history.

Baker AL, Pearson T, Sahl JW, Hepp C, Price EP, Sarovich DS, Mayo M, Tuanyok A, Currie BJ, Keim P, Warner J.

PLoS One. 2018 Nov 5;13(11):e0206845. doi: 10.1371/journal.pone.0206845. eCollection 2018.

6.

Staphylococcus aureus from patients with chronic rhinosinusitis show minimal genetic association between polyp and non-polyp phenotypes.

Bardy JJ, Sarovich DS, Price EP, Steinig E, Tong S, Drilling A, Ou J, Vreugde S, Wormald PJ, Psaltis AJ.

BMC Ear Nose Throat Disord. 2018 Oct 16;18:16. doi: 10.1186/s12901-018-0064-1. eCollection 2018.

7.

Development and validation of a triplex quantitative real-time PCR assay to detect efflux pump-mediated antibiotic resistance in Burkholderia pseudomallei.

Webb JR, Price EP, Somprasong N, Schweizer HP, Baird RW, Currie BJ, Sarovich DS.

Future Microbiol. 2018 Sep;13:1403-1418. doi: 10.2217/fmb-2018-0155. Epub 2018 Sep 26.

PMID:
30256166
8.

Transcriptomic analysis of longitudinal Burkholderia pseudomallei infecting the cystic fibrosis lung.

Price EP, Viberg LT, Kidd TJ, Bell SC, Currie BJ, Sarovich DS.

Microb Genom. 2018 Aug;4(8). doi: 10.1099/mgen.0.000194. Epub 2018 Jul 10.

9.

Investigation of trimethoprim/sulfamethoxazole resistance in an emerging sequence type 5 methicillin-resistant Staphylococcus aureus clone reveals discrepant resistance reporting.

Harris TM, Bowen AC, Holt DC, Sarovich DS, Stevens K, Currie BJ, Howden BP, Carapetis JR, Giffard PM, Tong SYC.

Clin Microbiol Infect. 2018 Sep;24(9):1027-1029. doi: 10.1016/j.cmi.2018.04.020. Epub 2018 May 1. No abstract available.

PMID:
29723570
10.

Complete Genome Sequence of the Environmental Burkholderia pseudomallei Sequence Type 131 Isolate MSHR1435, Associated with a Chronic Melioidosis Infection.

Sahl JW, Mayo M, Price EP, Sarovich DS, Kaestli M, Pearson T, Williamson CHD, Nottingham R, Sheridan K, Wagner DM, Currie BJ, Keim P.

Genome Announc. 2018 Mar 15;6(11). pii: e00072-18. doi: 10.1128/genomeA.00072-18.

11.

Virulence of the Melioidosis Pathogen Burkholderia pseudomallei Requires the Oxidoreductase Membrane Protein DsbB.

McMahon RM, Ireland PM, Sarovich DS, Petit G, Jenkins CH, Sarkar-Tyson M, Currie BJ, Martin JL.

Infect Immun. 2018 Apr 23;86(5). pii: e00938-17. doi: 10.1128/IAI.00938-17. Print 2018 May.

12.

Raising the Stakes: Loss of Efflux Pump Regulation Decreases Meropenem Susceptibility in Burkholderia pseudomallei.

Sarovich DS, Webb JR, Pitman MC, Viberg LT, Mayo M, Baird RW, Robson JM, Currie BJ, Price EP.

Clin Infect Dis. 2018 Jul 2;67(2):243-250. doi: 10.1093/cid/ciy069.

PMID:
29394337
13.

Suspected cases of intracontinental Burkholderia pseudomallei sequence type homoplasy resolved using whole-genome sequencing.

Aziz A, Sarovich DS, Harris TM, Kaestli M, McRobb E, Mayo M, Currie BJ, Price EP.

Microb Genom. 2017 Nov;3(11). doi: 10.1099/mgen.0.000139.

14.

Whole-genome sequencing to investigate a non-clonal melioidosis cluster on a remote Australian island.

Sarovich DS, Chapple SNJ, Price EP, Mayo M, Holden MTG, Peacock SJ, Currie BJ.

Microb Genom. 2017 Jun 13;3(8):e000117. doi: 10.1099/mgen.0.000117. eCollection 2017 Aug.

15.

Comparative Genomics of Burkholderia singularis sp. nov., a Low G+C Content, Free-Living Bacterium That Defies Taxonomic Dissection of the Genus Burkholderia.

Vandamme P, Peeters C, De Smet B, Price EP, Sarovich DS, Henry DA, Hird TJ, Zlosnik JEA, Mayo M, Warner J, Baker A, Currie BJ, Carlier A.

Front Microbiol. 2017 Sep 6;8:1679. doi: 10.3389/fmicb.2017.01679. eCollection 2017.

16.

Phylogeographic, genomic, and meropenem susceptibility analysis of Burkholderia ubonensis.

Price EP, Sarovich DS, Webb JR, Hall CM, Jaramillo SA, Sahl JW, Kaestli M, Mayo M, Harrington G, Baker AL, Sidak-Loftis LC, Settles EW, Lummis M, Schupp JM, Gillece JD, Tuanyok A, Warner J, Busch JD, Keim P, Currie BJ, Wagner DM.

PLoS Negl Trop Dis. 2017 Sep 14;11(9):e0005928. doi: 10.1371/journal.pntd.0005928. eCollection 2017 Sep.

17.

Mechanisms of Resistance to Folate Pathway Inhibitors in Burkholderia pseudomallei: Deviation from the Norm.

Podnecky NL, Rhodes KA, Mima T, Drew HR, Chirakul S, Wuthiekanun V, Schupp JM, Sarovich DS, Currie BJ, Keim P, Schweizer HP.

MBio. 2017 Sep 5;8(5). pii: e01357-17. doi: 10.1128/mBio.01357-17.

18.

Simultaneous identification of Haemophilus influenzae and Haemophilus haemolyticus using real-time PCR.

Price EP, Harris TM, Spargo J, Nosworthy E, Beissbarth J, Chang AB, Smith-Vaughan HC, Sarovich DS.

Future Microbiol. 2017 Jun;12:585-593. doi: 10.2217/fmb-2016-0215. Epub 2017 Jun 12.

19.

Plasmacytoid dendritic cells appear inactive during sub-microscopic Plasmodium falciparum blood-stage infection, yet retain their ability to respond to TLR stimulation.

Loughland JR, Minigo G, Sarovich DS, Field M, Tipping PE, Montes de Oca M, Piera KA, Amante FH, Barber BE, Grigg MJ, William T, Good MF, Doolan DL, Engwerda CR, Anstey NM, McCarthy JS, Woodberry T.

Sci Rep. 2017 Jun 1;7(1):2596. doi: 10.1038/s41598-017-02096-2.

20.

Increased Neurotropic Threat from Burkholderia pseudomallei Strains with a B. mallei-like Variation in the bimA Motility Gene, Australia.

Morris JL, Fane A, Sarovich DS, Price EP, Rush CM, Govan BL, Parker E, Mayo M, Currie BJ, Ketheesan N.

Emerg Infect Dis. 2017 May;23(5). doi: 10.3201/eid2305.151417.

21.

Within-Host Evolution of Burkholderia pseudomallei during Chronic Infection of Seven Australasian Cystic Fibrosis Patients.

Viberg LT, Sarovich DS, Kidd TJ, Geake JB, Bell SC, Currie BJ, Price EP.

MBio. 2017 Apr 11;8(2). pii: e00356-17. doi: 10.1128/mBio.00356-17.

22.

Whole-Genome Sequences of Burkholderia pseudomallei Isolates Exhibiting Decreased Meropenem Susceptibility.

Price EP, Smith ML, Paxinos EE, Tallon LJ, Sadzewicz L, Sengamalay N, Baird RW, Currie BJ, Sarovich DS.

Genome Announc. 2017 Apr 6;5(14). pii: e00053-17. doi: 10.1128/genomeA.00053-17.

23.

Whole-genome sequencing of a quarter-century melioidosis outbreak in temperate Australia uncovers a region of low-prevalence endemicity.

Chapple SNJ, Sarovich DS, Holden MTG, Peacock SJ, Buller N, Golledge C, Mayo M, Currie BJ, Price EP.

Microb Genom. 2016 Jul 11;2(7):e000067. doi: 10.1099/mgen.0.000067. eCollection 2016 Jul.

24.

Loss of Methyltransferase Function and Increased Efflux Activity Leads to Doxycycline Resistance in Burkholderia pseudomallei.

Webb JR, Price EP, Currie BJ, Sarovich DS.

Antimicrob Agents Chemother. 2017 May 24;61(6). pii: e00268-17. doi: 10.1128/AAC.00268-17. Print 2017 Jun.

25.

The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers.

Sahl JW, Vazquez AJ, Hall CM, Busch JD, Tuanyok A, Mayo M, Schupp JM, Lummis M, Pearson T, Shippy K, Colman RE, Allender CJ, Theobald V, Sarovich DS, Price EP, Hutcheson A, Korlach J, LiPuma JJ, Ladner J, Lovett S, Koroleva G, Palacios G, Limmathurotsakul D, Wuthiekanun V, Wongsuwan G, Currie BJ, Keim P, Wagner DM.

MBio. 2016 Sep 20;7(5). pii: e00846-16. doi: 10.1128/mBio.00846-16.

26.

Improved multilocus sequence typing of Burkholderia pseudomallei and closely related species.

Price EP, MacHunter B, Spratt BG, Wagner DM, Currie BJ, Sarovich DS.

J Med Microbiol. 2016 Sep;65(9):992-7. doi: 10.1099/jmm.0.000312. Epub 2016 Jul 13.

PMID:
27412128
27.

Phylogenomic Analysis Reveals an Asian Origin for African Burkholderia pseudomallei and Further Supports Melioidosis Endemicity in Africa.

Sarovich DS, Garin B, De Smet B, Kaestli M, Mayo M, Vandamme P, Jacobs J, Lompo P, Tahita MC, Tinto H, Djaomalaza I, Currie BJ, Price EP.

mSphere. 2016 Mar 9;1(2). pii: e00089-15. doi: 10.1128/mSphere.00089-15. eCollection 2016 Mar-Apr.

28.

Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages.

Andersson P, Harris SR, Smith HMBS, Hadfield J, O'Neill C, Cutcliffe LT, Douglas FP, Asche LV, Mathews JD, Hutton SI, Sarovich DS, Tong SYC, Clarke IN, Thomson NR, Giffard PM.

Nat Commun. 2016 Feb 25;7:10688. doi: 10.1038/ncomms10688.

29.

Unprecedented Melioidosis Cases in Northern Australia Caused by an Asian Burkholderia pseudomallei Strain Identified by Using Large-Scale Comparative Genomics.

Price EP, Sarovich DS, Smith EJ, MacHunter B, Harrington G, Theobald V, Hall CM, Hornstra HM, McRobb E, Podin Y, Mayo M, Sahl JW, Wagner DM, Keim P, Kaestli M, Currie BJ.

Appl Environ Microbiol. 2015 Nov 25;82(3):954-63. doi: 10.1128/AEM.03013-15. Print 2016 Feb 1.

30.

Melioidosis in New Caledonia: a dominant strain in a transmission hotspot.

Melot B, Colot J, Lacassin F, Tardieu S, Lapisardi E, Mayo M, Price EP, Sarovich DS, Currie BJ, Goarant C.

Epidemiol Infect. 2016 Apr;144(6):1330-7. doi: 10.1017/S0950268815002770. Epub 2015 Nov 6.

PMID:
26542622
31.

Burkholderia pseudomallei Genotype Distribution in the Northern Territory, Australia.

Chapple SN, Price EP, Sarovich DS, McRobb E, Mayo M, Kaestli M, Spratt BG, Currie BJ.

Am J Trop Med Hyg. 2016 Jan;94(1):68-72. doi: 10.4269/ajtmh.15-0627. Epub 2015 Nov 2.

32.

Use of Whole-Genome Sequencing to Link Burkholderia pseudomallei from Air Sampling to Mediastinal Melioidosis, Australia.

Currie BJ, Price EP, Mayo M, Kaestli M, Theobald V, Harrington I, Harrington G, Sarovich DS.

Emerg Infect Dis. 2015 Nov;21(11):2052-4. doi: 10.3201/eid2111.141802.

33.

Haemophilus influenzae: using comparative genomics to accurately identify a highly recombinogenic human pathogen.

Price EP, Sarovich DS, Nosworthy E, Beissbarth J, Marsh RL, Pickering J, Kirkham LA, Keil AD, Chang AB, Smith-Vaughan HC.

BMC Genomics. 2015 Aug 27;16:641. doi: 10.1186/s12864-015-1857-x.

34.

Endemic melioidosis in residents of desert region after atypically intense rainfall in central Australia, 2011.

Yip TW, Hewagama S, Mayo M, Price EP, Sarovich DS, Bastian I, Baird RW, Spratt BG, Currie BJ.

Emerg Infect Dis. 2015 Jun;21(6):1038-40. doi: 10.3201/eid2106.141908.

35.

Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus.

Steinig EJ, Andersson P, Harris SR, Sarovich DS, Manoharan A, Coupland P, Holden MT, Parkhill J, Bentley SD, Robinson DA, Tong SY.

BMC Genomics. 2015 May 16;16:388. doi: 10.1186/s12864-015-1599-9.

36.

Whole-Genome Sequences of Five Burkholderia pseudomallei Isolates from Australian Cystic Fibrosis Patients.

Viberg LT, Price EP, Kidd TJ, Bell SC, Currie BJ, Sarovich DS.

Genome Announc. 2015 Apr 16;3(2). pii: e00254-15. doi: 10.1128/genomeA.00254-15.

37.

Whole-Genome Sequences of 80 Environmental and Clinical Isolates of Burkholderia pseudomallei.

Johnson SL, Baker AL, Chain PS, Currie BJ, Daligault HE, Davenport KW, Davis CB, Inglis TJ, Kaestli M, Koren S, Mayo M, Merritt AJ, Price EP, Sarovich DS, Warner J, Rosovitz MJ.

Genome Announc. 2015 Feb 12;3(1). pii: e01282-14. doi: 10.1128/genomeA.01282-14.

38.

Tracing melioidosis back to the source: using whole-genome sequencing to investigate an outbreak originating from a contaminated domestic water supply.

McRobb E, Sarovich DS, Price EP, Kaestli M, Mayo M, Keim P, Currie BJ.

J Clin Microbiol. 2015 Apr;53(4):1144-8. doi: 10.1128/JCM.03453-14. Epub 2015 Jan 28.

39.

Whole-genome sequencing confirms that Burkholderia pseudomallei multilocus sequence types common to both Cambodia and Australia are due to homoplasy.

De Smet B, Sarovich DS, Price EP, Mayo M, Theobald V, Kham C, Heng S, Thong P, Holden MT, Parkhill J, Peacock SJ, Spratt BG, Jacobs JA, Vandamme P, Currie BJ.

J Clin Microbiol. 2015 Jan;53(1):323-6. doi: 10.1128/JCM.02574-14. Epub 2014 Nov 12.

40.

Whole-genome sequencing of Burkholderia pseudomallei isolates from an unusual melioidosis case identifies a polyclonal infection with the same multilocus sequence type.

Price EP, Sarovich DS, Viberg L, Mayo M, Kaestli M, Tuanyok A, Foster JT, Keim P, Pearson T, Currie BJ.

J Clin Microbiol. 2015 Jan;53(1):282-6. doi: 10.1128/JCM.02560-14. Epub 2014 Oct 22.

41.

Autochthonous melioidosis in humans, Madagascar, 2012 and 2013.

Garin B, Djaomazala I, Dubois-Cauwelaert N; Mahafaly, Raharimanga V, Ralison F, Herindrainy P, Andriamalala NC, Sarovich DS, Mayo M, Kaestli M, Currie BJ.

Emerg Infect Dis. 2014 Oct;20(10):1739-41. doi: 10.3201/eid2010.131524.

42.

SPANDx: a genomics pipeline for comparative analysis of large haploid whole genome re-sequencing datasets.

Sarovich DS, Price EP.

BMC Res Notes. 2014 Sep 8;7:618. doi: 10.1186/1756-0500-7-618.

43.

Distribution of Burkholderia pseudomallei in northern Australia, a land of diversity.

McRobb E, Kaestli M, Price EP, Sarovich DS, Mayo M, Warner J, Spratt BG, Currie BJ.

Appl Environ Microbiol. 2014 Jun;80(11):3463-8. doi: 10.1128/AEM.00128-14. Epub 2014 Mar 21.

44.

Development of a prototype lateral flow immunoassay (LFI) for the rapid diagnosis of melioidosis.

Houghton RL, Reed DE, Hubbard MA, Dillon MJ, Chen H, Currie BJ, Mayo M, Sarovich DS, Theobald V, Limmathurotsakul D, Wongsuvan G, Chantratita N, Peacock SJ, Hoffmaster AR, Duval B, Brett PJ, Burtnick MN, Aucoin DP.

PLoS Negl Trop Dis. 2014 Mar 20;8(3):e2727. doi: 10.1371/journal.pntd.0002727. eCollection 2014 Mar.

45.

Variable virulence factors in Burkholderia pseudomallei (melioidosis) associated with human disease.

Sarovich DS, Price EP, Webb JR, Ward LM, Voutsinos MY, Tuanyok A, Mayo M, Kaestli M, Currie BJ.

PLoS One. 2014 Mar 11;9(3):e91682. doi: 10.1371/journal.pone.0091682. eCollection 2014.

46.

Recurrent melioidosis in the Darwin Prospective Melioidosis Study: improving therapies mean that relapse cases are now rare.

Sarovich DS, Ward L, Price EP, Mayo M, Pitman MC, Baird RW, Currie BJ.

J Clin Microbiol. 2014 Feb;52(2):650-3. doi: 10.1128/JCM.02239-13. Epub 2013 Nov 27.

47.

Absence of an important vaccine and diagnostic target in carriage- and disease-related nontypeable Haemophilus influenzae.

Smith-Vaughan HC, Chang AB, Sarovich DS, Marsh RL, Grimwood K, Leach AJ, Morris PS, Price EP.

Clin Vaccine Immunol. 2014 Feb;21(2):250-2. doi: 10.1128/CVI.00632-13. Epub 2013 Nov 27.

48.

Burkholderia pseudomallei isolates from Sarawak, Malaysian Borneo, are predominantly susceptible to aminoglycosides and macrolides.

Podin Y, Sarovich DS, Price EP, Kaestli M, Mayo M, Hii K, Ngian H, Wong S, Wong I, Wong J, Mohan A, Ooi M, Fam T, Wong J, Tuanyok A, Keim P, Giffard PM, Currie BJ.

Antimicrob Agents Chemother. 2014;58(1):162-6. doi: 10.1128/AAC.01842-13. Epub 2013 Oct 21.

49.

Accurate and rapid identification of the Burkholderia pseudomallei near-neighbour, Burkholderia ubonensis, using real-time PCR.

Price EP, Sarovich DS, Webb JR, Ginther JL, Mayo M, Cook JM, Seymour ML, Kaestli M, Theobald V, Hall CM, Busch JD, Foster JT, Keim P, Wagner DM, Tuanyok A, Pearson T, Currie BJ.

PLoS One. 2013 Aug 13;8(8):e71647. doi: 10.1371/journal.pone.0071647. eCollection 2013.

50.

Within-host evolution of Burkholderia pseudomallei over a twelve-year chronic carriage infection.

Price EP, Sarovich DS, Mayo M, Tuanyok A, Drees KP, Kaestli M, Beckstrom-Sternberg SM, Babic-Sternberg JS, Kidd TJ, Bell SC, Keim P, Pearson T, Currie BJ.

MBio. 2013 Jul 16;4(4). pii: e00388-13. doi: 10.1128/mBio.00388-13.

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