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Items: 15

1.

Measuring Caenorhabditis elegans Spatial Foraging and Food Intake Using Bioluminescent Bacteria.

Ding SS, Romenskyy M, Sarkisyan KS, Brown AEX.

Genetics. 2020 Mar;214(3):577-587. doi: 10.1534/genetics.119.302804. Epub 2020 Jan 7.

PMID:
31911453
2.

An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape.

Pokusaeva VO, Usmanova DR, Putintseva EV, Espinar L, Sarkisyan KS, Mishin AS, Bogatyreva NS, Ivankov DN, Akopyan AV, Avvakumov SY, Povolotskaya IS, Filion GJ, Carey LB, Kondrashov FA.

PLoS Genet. 2019 Apr 10;15(4):e1008079. doi: 10.1371/journal.pgen.1008079. eCollection 2019 Apr.

3.

A brief review of bioluminescent systems (2019).

Fleiss A, Sarkisyan KS.

Curr Genet. 2019 Aug;65(4):877-882. doi: 10.1007/s00294-019-00951-5. Epub 2019 Mar 8. Review.

4.

Genetically encodable bioluminescent system from fungi.

Kotlobay AA, Sarkisyan KS, Mokrushina YA, Marcet-Houben M, Serebrovskaya EO, Markina NM, Gonzalez Somermeyer L, Gorokhovatsky AY, Vvedensky A, Purtov KV, Petushkov VN, Rodionova NS, Chepurnyh TV, Fakhranurova LI, Guglya EB, Ziganshin R, Tsarkova AS, Kaskova ZM, Shender V, Abakumov M, Abakumova TO, Povolotskaya IS, Eroshkin FM, Zaraisky AG, Mishin AS, Dolgov SV, Mitiouchkina TY, Kopantzev EP, Waldenmaier HE, Oliveira AG, Oba Y, Barsova E, Bogdanova EA, Gabaldón T, Stevani CV, Lukyanov S, Smirnov IV, Gitelson JI, Kondrashov FA, Yampolsky IV.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):12728-12732. doi: 10.1073/pnas.1803615115. Epub 2018 Nov 26.

5.

Protein labeling for live cell fluorescence microscopy with a highly photostable renewable signal.

Bozhanova NG, Baranov MS, Klementieva NV, Sarkisyan KS, Gavrikov AS, Yampolsky IV, Zagaynova EV, Lukyanov SA, Lukyanov KA, Mishin AS.

Chem Sci. 2017 Oct 1;8(10):7138-7142. doi: 10.1039/c7sc01628j. Epub 2017 Aug 3.

6.

Yellow and Orange Fluorescent Proteins with Tryptophan-based Chromophores.

Bozhanova NG, Baranov MS, Sarkisyan KS, Gritcenko R, Mineev KS, Golodukhina SV, Baleeva NS, Lukyanov KA, Mishin AS.

ACS Chem Biol. 2017 Jul 21;12(7):1867-1873. doi: 10.1021/acschembio.7b00337. Epub 2017 Jun 6.

PMID:
28525263
7.

Local fitness landscape of the green fluorescent protein.

Sarkisyan KS, Bolotin DA, Meer MV, Usmanova DR, Mishin AS, Sharonov GV, Ivankov DN, Bozhanova NG, Baranov MS, Soylemez O, Bogatyreva NS, Vlasov PK, Egorov ES, Logacheva MD, Kondrashov AS, Chudakov DM, Putintseva EV, Mamedov IZ, Tawfik DS, Lukyanov KA, Kondrashov FA.

Nature. 2016 May 19;533(7603):397-401. doi: 10.1038/nature17995. Epub 2016 May 11.

8.

Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.

Pletneva NV, Pletnev VZ, Sarkisyan KS, Gorbachev DA, Egorov ES, Mishin AS, Lukyanov KA, Dauter Z, Pletnev S.

PLoS One. 2015 Dec 23;10(12):e0145740. doi: 10.1371/journal.pone.0145740. eCollection 2015.

9.

KillerOrange, a Genetically Encoded Photosensitizer Activated by Blue and Green Light.

Sarkisyan KS, Zlobovskaya OA, Gorbachev DA, Bozhanova NG, Sharonov GV, Staroverov DB, Egorov ES, Ryabova AV, Solntsev KM, Mishin AS, Lukyanov KA.

PLoS One. 2015 Dec 17;10(12):e0145287. doi: 10.1371/journal.pone.0145287. eCollection 2015.

10.

[Infrared Fluorescent Protein iRFP as an Acceptor for Förster Resonance Energy Transfer].

Zlobovskaya OA, Sarkisyan KS, Lukyanov KA.

Bioorg Khim. 2015 May-Jun;41(3):299-304. Russian.

PMID:
26502606
11.

Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.

Pletnev VZ, Pletneva NV, Sarkisyan KS, Mishin AS, Lukyanov KA, Goryacheva EA, Ziganshin RH, Dauter Z, Pletnev S.

Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1699-707. doi: 10.1107/S1399004715010159. Epub 2015 Jul 31.

12.

Fluorescent Protein Based FRET Pairs with Improved Dynamic Range for Fluorescence Lifetime Measurements.

George Abraham B, Sarkisyan KS, Mishin AS, Santala V, Tkachenko NV, Karp M.

PLoS One. 2015 Aug 3;10(8):e0134436. doi: 10.1371/journal.pone.0134436. eCollection 2015.

13.

Green fluorescent protein with anionic tryptophan-based chromophore and long fluorescence lifetime.

Sarkisyan KS, Goryashchenko AS, Lidsky PV, Gorbachev DA, Bozhanova NG, Gorokhovatsky AY, Pereverzeva AR, Ryumina AP, Zherdeva VV, Savitsky AP, Solntsev KM, Bommarius AS, Sharonov GV, Lindquist JR, Drobizhev M, Hughes TE, Rebane A, Lukyanov KA, Mishin AS.

Biophys J. 2015 Jul 21;109(2):380-9. doi: 10.1016/j.bpj.2015.06.018.

14.

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.

Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, Chen TW, Sarkisyan KS, Marvin JS, Bargmann CI, Kim DS, Kügler S, Lagnado L, Hegemann P, Gottschalk A, Schreiter ER, Looger LL.

Front Mol Neurosci. 2013 Mar 4;6:2. doi: 10.3389/fnmol.2013.00002. eCollection 2013.

15.

Tryptophan-based chromophore in fluorescent proteins can be anionic.

Sarkisyan KS, Yampolsky IV, Solntsev KM, Lukyanov SA, Lukyanov KA, Mishin AS.

Sci Rep. 2012;2:608. doi: 10.1038/srep00608. Epub 2012 Aug 29.

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