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Items: 40

1.

Transcriptomic and proteomic analysis of mouse radiation-induced acute myeloid leukaemia (AML).

Badie C, Blachowicz A, Barjaktarovic Z, Finnon R, Michaux A, Sarioglu H, Brown N, Manning G, Benotmane MA, Tapio S, Polanska J, Bouffler SD.

Oncotarget. 2016 Jun 28;7(26):40461-40480. doi: 10.18632/oncotarget.9626.

2.

Nitric oxide-fixation by non-symbiotic haemoglobin proteins in Arabidopsis thaliana under N-limited conditions.

Kuruthukulangarakoola GT, Zhang J, Albert A, Winkler B, Lang H, Buegger F, Gaupels F, Heller W, Michalke B, Sarioglu H, Schnitzler JP, Hebelstrup KH, Durner J, Lindermayr C.

Plant Cell Environ. 2017 Jan;40(1):36-50. doi: 10.1111/pce.12773. Epub 2016 Jul 25.

3.

Corrigendum: Systemic Induction of NO-, Redox-, and cGMP Signaling in the Pumpkin Extrafascicular Phloem upon Local Leaf Wounding.

Gaupels F, Furch AC, Zimmermann MR, Chen F, Kaever V, Buhtz A, Kehr J, Sarioglu H, Kogel KH, Durner J.

Front Plant Sci. 2016 Mar 7;7:281. doi: 10.3389/fpls.2016.00281. eCollection 2016.

4.

Differential Response and Priming Dose Effect on the Proteome of Human Fibroblast and Stem Cells Induced by Exposure to Low Doses of Ionizing Radiation.

Hauptmann M, Haghdoost S, Gomolka M, Sarioglu H, Ueffing M, Dietz A, Kulka U, Unger K, Babini G, Harms-Ringdahl M, Ottolenghi A, Hornhardt S.

Radiat Res. 2016 Mar;185(3):299-312. doi: 10.1667/RR14226.1. Epub 2016 Mar 2.

PMID:
26934482
5.

Systemic Induction of NO-, Redox-, and cGMP Signaling in the Pumpkin Extrafascicular Phloem upon Local Leaf Wounding.

Gaupels F, Furch AC, Zimmermann MR, Chen F, Kaever V, Buhtz A, Kehr J, Sarioglu H, Kogel KH, Durner J.

Front Plant Sci. 2016 Feb 12;7:154. doi: 10.3389/fpls.2016.00154. eCollection 2016. Erratum in: Front Plant Sci. 2016;7:281.

6.

The Epoxyeicosatrienoic Acid Pathway Enhances Hepatic Insulin Signaling and is Repressed in Insulin-Resistant Mouse Liver.

Schäfer A, Neschen S, Kahle M, Sarioglu H, Gaisbauer T, Imhof A, Adamski J, Hauck SM, Ueffing M.

Mol Cell Proteomics. 2015 Oct;14(10):2764-74. doi: 10.1074/mcp.M115.049064. Epub 2015 Jun 12.

7.

Quantitative and integrated proteome and microRNA analysis of endothelial replicative senescence.

Yentrapalli R, Azimzadeh O, Kraemer A, Malinowsky K, Sarioglu H, Becker KF, Atkinson MJ, Moertl S, Tapio S.

J Proteomics. 2015 Aug 3;126:12-23. doi: 10.1016/j.jprot.2015.05.023. Epub 2015 May 24.

PMID:
26013412
8.

High fat diet-induced modifications in membrane lipid and mitochondrial-membrane protein signatures precede the development of hepatic insulin resistance in mice.

Kahle M, Schäfer A, Seelig A, Schultheiß J, Wu M, Aichler M, Leonhardt J, Rathkolb B, Rozman J, Sarioglu H, Hauck SM, Ueffing M, Wolf E, Kastenmueller G, Adamski J, Walch A, Hrabé de Angelis M, Neschen S.

Mol Metab. 2014 Nov 14;4(1):39-50. doi: 10.1016/j.molmet.2014.11.004. eCollection 2015 Jan.

9.

Integrative proteomics and targeted transcriptomics analyses in cardiac endothelial cells unravel mechanisms of long-term radiation-induced vascular dysfunction.

Azimzadeh O, Sievert W, Sarioglu H, Merl-Pham J, Yentrapalli R, Bakshi MV, Janik D, Ueffing M, Atkinson MJ, Multhoff G, Tapio S.

J Proteome Res. 2015 Feb 6;14(2):1203-19. doi: 10.1021/pr501141b. Epub 2015 Jan 29.

PMID:
25590149
10.

Differential inhibition of Arabidopsis superoxide dismutases by peroxynitrite-mediated tyrosine nitration.

Holzmeister C, Gaupels F, Geerlof A, Sarioglu H, Sattler M, Durner J, Lindermayr C.

J Exp Bot. 2015 Feb;66(3):989-99. doi: 10.1093/jxb/eru458. Epub 2014 Nov 26.

11.

Feasibility and quality development of biomaterials in the pretest studies of the German National Cohort.

Kühn A, Nieters A, Köttgen A, Goek ON, Michels K, Nöthlings U, Jacobs G, Meisinger C, Pessler F, Akmatov MF, Kühnisch J, Moebus S, Glocker E, Naus S, Keimling M, Leitzmann M, Linseisen J, Sarioglu H, von Toerne C, Hauck SM, Wallaschofski H, Wichmann HE, Illig T.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2014 Nov;57(11):1255-63. doi: 10.1007/s00103-014-2048-7.

PMID:
25293886
12.

Contrasting Roles of the Apoplastic Aspartyl Protease APOPLASTIC, ENHANCED DISEASE SUSCEPTIBILITY1-DEPENDENT1 and LEGUME LECTIN-LIKE PROTEIN1 in Arabidopsis Systemic Acquired Resistance.

Breitenbach HH, Wenig M, Wittek F, Jordá L, Maldonado-Alconada AM, Sarioglu H, Colby T, Knappe C, Bichlmeier M, Pabst E, Mackey D, Parker JE, Vlot AC.

Plant Physiol. 2014 Jun;165(2):791-809. Epub 2014 Apr 22.

13.

Cell survival following radiation exposure requires miR-525-3p mediated suppression of ARRB1 and TXN1.

Kraemer A, Barjaktarovic Z, Sarioglu H, Winkler K, Eckardt-Schupp F, Tapio S, Atkinson MJ, Moertl S.

PLoS One. 2013 Oct 16;8(10):e77484. doi: 10.1371/journal.pone.0077484. eCollection 2013.

14.

Serum protein identification and quantification of the corona of 5, 15 and 80 nm gold nanoparticles.

Schäffler M, Semmler-Behnke M, Sarioglu H, Takenaka S, Wenk A, Schleh C, Hauck SM, Johnston BD, Kreyling WG.

Nanotechnology. 2013 Jul 5;24(26):265103.

PMID:
23735821
15.

PPAR alpha: a novel radiation target in locally exposed Mus musculus heart revealed by quantitative proteomics.

Azimzadeh O, Sievert W, Sarioglu H, Yentrapalli R, Barjaktarovic Z, Sriharshan A, Ueffing M, Janik D, Aichler M, Atkinson MJ, Multhoff G, Tapio S.

J Proteome Res. 2013 Jun 7;12(6):2700-14. doi: 10.1021/pr400071g. Epub 2013 Apr 29.

PMID:
23560462
16.

Ionising radiation induces persistent alterations in the cardiac mitochondrial function of C57BL/6 mice 40 weeks after local heart exposure.

Barjaktarovic Z, Shyla A, Azimzadeh O, Schulz S, Haagen J, Dörr W, Sarioglu H, Atkinson MJ, Zischka H, Tapio S.

Radiother Oncol. 2013 Mar;106(3):404-10. doi: 10.1016/j.radonc.2013.01.017. Epub 2013 Mar 20.

PMID:
23522698
17.

Quantitative proteomic analysis reveals induction of premature senescence in human umbilical vein endothelial cells exposed to chronic low-dose rate gamma radiation.

Yentrapalli R, Azimzadeh O, Barjaktarovic Z, Sarioglu H, Wojcik A, Harms-Ringdahl M, Atkinson MJ, Haghdoost S, Tapio S.

Proteomics. 2013 Apr;13(7):1096-107. doi: 10.1002/pmic.201200463. Epub 2013 Mar 4.

PMID:
23349028
18.

Proteomic investigation of the interactome of FMNL1 in hematopoietic cells unveils a role in calcium-dependent membrane plasticity.

Han Y, Yu G, Sarioglu H, Caballero-Martinez A, Schlott F, Ueffing M, Haase H, Peschel C, Krackhardt AM.

J Proteomics. 2013 Jan 14;78:72-82. doi: 10.1016/j.jprot.2012.11.015. Epub 2012 Nov 24.

PMID:
23182705
19.

Integrative proteomic and microRNA analysis of primary human coronary artery endothelial cells exposed to low-dose gamma radiation.

Barjaktarovic Z, Anastasov N, Azimzadeh O, Sriharshan A, Sarioglu H, Ueffing M, Tammio H, Hakanen A, Leszczynski D, Atkinson MJ, Tapio S.

Radiat Environ Biophys. 2013 Mar;52(1):87-98. doi: 10.1007/s00411-012-0439-4. Epub 2012 Nov 9.

PMID:
23138885
20.

Variability of protein and phosphoprotein levels in clinical tissue specimens during the preanalytical phase.

Gündisch S, Hauck S, Sarioglu H, Schott C, Viertler C, Kap M, Schuster T, Reischauer B, Rosenberg R, Verhoef C, Mischinger HJ, Riegman P, Zatloukal K, Becker KF.

J Proteome Res. 2012 Dec 7;11(12):5748-62. doi: 10.1021/pr300560y. Epub 2012 Nov 16.

PMID:
23134551
21.

Deciphering systemic wound responses of the pumpkin extrafascicular phloem by metabolomics and stable isotope-coded protein labeling.

Gaupels F, Sarioglu H, Beckmann M, Hause B, Spannagl M, Draper J, Lindermayr C, Durner J.

Plant Physiol. 2012 Dec;160(4):2285-99. doi: 10.1104/pp.112.205336. Epub 2012 Oct 19.

22.

Two-dimensional peptide separation improving sensitivity of selected reaction monitoring-based quantitative proteomics in mouse liver tissue: comparing off-gel electrophoresis and strong cation exchange chromatography.

Schäfer A, von Toerne C, Becker S, Sarioglu H, Neschen S, Kahle M, Hauck SM, Ueffing M.

Anal Chem. 2012 Oct 16;84(20):8853-62. doi: 10.1021/ac3023026. Epub 2012 Oct 4.

PMID:
22994301
23.

The germinal center kinase TNIK is required for canonical NF-κB and JNK signaling in B-cells by the EBV oncoprotein LMP1 and the CD40 receptor.

Shkoda A, Town JA, Griese J, Romio M, Sarioglu H, Knöfel T, Giehler F, Kieser A.

PLoS Biol. 2012;10(8):e1001376. doi: 10.1371/journal.pbio.1001376. Epub 2012 Aug 14.

24.

Looking deep inside: detection of low-abundance proteins in leaf extracts of Arabidopsis and phloem exudates of pumpkin.

Fröhlich A, Gaupels F, Sarioglu H, Holzmeister C, Spannagl M, Durner J, Lindermayr C.

Plant Physiol. 2012 Jul;159(3):902-14. doi: 10.1104/pp.112.198077. Epub 2012 May 3.

25.

Proteomic analysis by SILAC and 2D-DIGE reveals radiation-induced endothelial response: four key pathways.

Sriharshan A, Boldt K, Sarioglu H, Barjaktarovic Z, Azimzadeh O, Hieber L, Zitzelsberger H, Ueffing M, Atkinson MJ, Tapio S.

J Proteomics. 2012 Apr 18;75(8):2319-30. doi: 10.1016/j.jprot.2012.02.009. Epub 2012 Feb 20.

PMID:
22370162
26.

MALDI imaging mass spectrometry reveals COX7A2, TAGLN2 and S100-A10 as novel prognostic markers in Barrett's adenocarcinoma.

Elsner M, Rauser S, Maier S, Schöne C, Balluff B, Meding S, Jung G, Nipp M, Sarioglu H, Maccarrone G, Aichler M, Feuchtinger A, Langer R, Jütting U, Feith M, Küster B, Ueffing M, Zitzelsberger H, Höfler H, Walch A.

J Proteomics. 2012 Aug 3;75(15):4693-704. doi: 10.1016/j.jprot.2012.02.012. Epub 2012 Feb 17.

PMID:
22365974
27.

Radiation-induced signaling results in mitochondrial impairment in mouse heart at 4 weeks after exposure to X-rays.

Barjaktarovic Z, Schmaltz D, Shyla A, Azimzadeh O, Schulz S, Haagen J, Dörr W, Sarioglu H, Schäfer A, Atkinson MJ, Zischka H, Tapio S.

PLoS One. 2011;6(12):e27811. doi: 10.1371/journal.pone.0027811. Epub 2011 Dec 8.

28.

MALDI imaging identifies prognostic seven-protein signature of novel tissue markers in intestinal-type gastric cancer.

Balluff B, Rauser S, Meding S, Elsner M, Schöne C, Feuchtinger A, Schuhmacher C, Novotny A, Jütting U, Maccarrone G, Sarioglu H, Ueffing M, Braselmann H, Zitzelsberger H, Schmid RM, Höfler H, Ebert MP, Walch A.

Am J Pathol. 2011 Dec;179(6):2720-9. doi: 10.1016/j.ajpath.2011.08.032. Epub 2011 Oct 18.

29.

S100-A10, thioredoxin, and S100-A6 as biomarkers of papillary thyroid carcinoma with lymph node metastasis identified by MALDI imaging.

Nipp M, Elsner M, Balluff B, Meding S, Sarioglu H, Ueffing M, Rauser S, Unger K, Höfler H, Walch A, Zitzelsberger H.

J Mol Med (Berl). 2012 Feb;90(2):163-74. doi: 10.1007/s00109-011-0815-6. Epub 2011 Sep 22.

PMID:
21938494
30.

Rapid proteomic remodeling of cardiac tissue caused by total body ionizing radiation.

Azimzadeh O, Scherthan H, Sarioglu H, Barjaktarovic Z, Conrad M, Vogt A, Calzada-Wack J, Neff F, Aubele M, Buske C, Atkinson MJ, Tapio S.

Proteomics. 2011 Aug;11(16):3299-311. doi: 10.1002/pmic.201100178.

PMID:
21751382
31.

Proteomic analysis of defense response of wildtype Arabidopsis thaliana and plants with impaired NO- homeostasis.

Holzmeister C, Fröhlich A, Sarioglu H, Bauer N, Durner J, Lindermayr C.

Proteomics. 2011 May;11(9):1664-83. doi: 10.1002/pmic.201000652. Epub 2011 Apr 4.

PMID:
21462345
32.

LRRK2 controls synaptic vesicle storage and mobilization within the recycling pool.

Piccoli G, Condliffe SB, Bauer M, Giesert F, Boldt K, De Astis S, Meixner A, Sarioglu H, Vogt-Weisenhorn DM, Wurst W, Gloeckner CJ, Matteoli M, Sala C, Ueffing M.

J Neurosci. 2011 Feb 9;31(6):2225-37. doi: 10.1523/JNEUROSCI.3730-10.2011.

33.

Low-dose irradiation causes rapid alterations to the proteome of the human endothelial cell line EA.hy926.

Pluder F, Barjaktarovic Z, Azimzadeh O, Mörtl S, Krämer A, Steininger S, Sarioglu H, Leszczynski D, Nylund R, Hakanen A, Sriharshan A, Atkinson MJ, Tapio S.

Radiat Environ Biophys. 2011 Mar;50(1):155-66. doi: 10.1007/s00411-010-0342-9. Epub 2010 Nov 23.

PMID:
21104263
34.

Formalin-fixed paraffin-embedded (FFPE) proteome analysis using gel-free and gel-based proteomics.

Azimzadeh O, Barjaktarovic Z, Aubele M, Calzada-Wack J, Sarioglu H, Atkinson MJ, Tapio S.

J Proteome Res. 2010 Sep 3;9(9):4710-20. doi: 10.1021/pr1004168.

PMID:
20604508
35.

Phosphopeptide analysis reveals two discrete clusters of phosphorylation in the N-terminus and the Roc domain of the Parkinson-disease associated protein kinase LRRK2.

Gloeckner CJ, Boldt K, von Zweydorf F, Helm S, Wiesent L, Sarioglu H, Ueffing M.

J Proteome Res. 2010 Apr 5;9(4):1738-45. doi: 10.1021/pr9008578.

PMID:
20108944
36.

Analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced proteome changes in 5L rat hepatoma cells reveals novel targets of dioxin action including the mitochondrial apoptosis regulator VDAC2.

Sarioglu H, Brandner S, Haberger M, Jacobsen C, Lichtmannegger J, Wormke M, Andrae U.

Mol Cell Proteomics. 2008 Feb;7(2):394-410. Epub 2007 Nov 12.

37.

Quantitative analysis of 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced proteome alterations in 5L rat hepatoma cells using isotope-coded protein labels.

Sarioglu H, Brandner S, Jacobsen C, Meindl T, Schmidt A, Kellermann J, Lottspeich F, Andrae U.

Proteomics. 2006 Apr;6(8):2407-21.

PMID:
16548065
38.

The ricinosomes of senescing plant tissue bud from the endoplasmic reticulum.

Schmid M, Simpson DJ, Sarioglu H, Lottspeich F, Gietl C.

Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):5353-8. Epub 2001 Apr 10.

39.

Deamidation as a widespread phenomenon in two-dimensional polyacrylamide gel electrophoresis of human blood plasma proteins.

Sarioglu H, Lottspeich F, Walk T, Jung G, Eckerskorn C.

Electrophoresis. 2000 Jun;21(11):2209-18.

PMID:
10892731

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