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Items: 24

1.

Crystal ball: the microbial map of the ocean.

Santoro AE.

Environ Microbiol Rep. 2019 Feb;11(1):35-37. doi: 10.1111/1758-2229.12721. Epub 2018 Dec 25. No abstract available.

PMID:
30585419
2.

Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods.

Strassert JFH, Hehenberger E, Del Campo J, Okamoto N, Kolisko M, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

J Eukaryot Microbiol. 2019 Jul;66(4):574-581. doi: 10.1111/jeu.12701. Epub 2018 Dec 11.

PMID:
30444565
3.

Planktonic Marine Archaea.

Santoro AE, Richter RA, Dupont CL.

Ann Rev Mar Sci. 2019 Jan 3;11:131-158. doi: 10.1146/annurev-marine-121916-063141. Epub 2018 Sep 13.

PMID:
30212260
4.

A Revised Taxonomy of Diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp.

Okamoto N, Gawryluk RMR, Del Campo J, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

J Eukaryot Microbiol. 2019 May;66(3):519-524. doi: 10.1111/jeu.12679. Epub 2018 Aug 29.

PMID:
30080299
5.

Patterns of thaumarchaeal gene expression in culture and diverse marine environments.

Carini P, Dupont CL, Santoro AE.

Environ Microbiol. 2018 Jun;20(6):2112-2124. doi: 10.1111/1462-2920.14107. Epub 2018 Apr 30.

PMID:
29626379
6.

Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing.

Orsi WD, Wilken S, Del Campo J, Heger T, James E, Richards TA, Keeling PJ, Worden AZ, Santoro AE.

Environ Microbiol. 2018 Feb;20(2):815-827. doi: 10.1111/1462-2920.14018. Epub 2018 Jan 2.

PMID:
29215213
7.

Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates.

Strassert JFH, Karnkowska A, Hehenberger E, Del Campo J, Kolisko M, Okamoto N, Burki F, Janouškovec J, Poirier C, Leonard G, Hallam SJ, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

ISME J. 2018 Jan;12(1):304-308. doi: 10.1038/ismej.2017.167. Epub 2017 Oct 10.

8.

Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton.

Monier A, Chambouvet A, Milner DS, Attah V, Terrado R, Lovejoy C, Moreau H, Santoro AE, Derelle É, Richards TA.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):E7489-E7498. doi: 10.1073/pnas.1708097114. Epub 2017 Aug 21.

9.

Morphological Identification and Single-Cell Genomics of Marine Diplonemids.

Gawryluk RMR, Del Campo J, Okamoto N, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE, Keeling PJ.

Curr Biol. 2016 Nov 21;26(22):3053-3059. doi: 10.1016/j.cub.2016.09.013.

10.

Distinguishing between Microbial Habitats Unravels Ecological Complexity in Coral Microbiomes.

Apprill A, Weber LG, Santoro AE.

mSystems. 2016 Oct 25;1(5). pii: e00143-16. eCollection 2016 Sep-Oct.

11.

Influence of ammonia oxidation rate on thaumarchaeal lipid composition and the TEX86 temperature proxy.

Hurley SJ, Elling FJ, Könneke M, Buchwald C, Wankel SD, Santoro AE, Lipp JS, Hinrichs KU, Pearson A.

Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7762-7. doi: 10.1073/pnas.1518534113. Epub 2016 Jun 28.

12.

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean.

Orsi WD, Smith JM, Liu S, Liu Z, Sakamoto CM, Wilken S, Poirier C, Richards TA, Keeling PJ, Worden AZ, Santoro AE.

ISME J. 2016 Sep;10(9):2158-73. doi: 10.1038/ismej.2016.20. Epub 2016 Mar 8.

13.

MICROBIOLOGY. The do-it-all nitrifier.

Santoro AE.

Science. 2016 Jan 22;351(6271):342-3. doi: 10.1126/science.aad9839. No abstract available.

PMID:
26798002
14.

Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter.

Orsi WD, Smith JM, Wilcox HM, Swalwell JE, Carini P, Worden AZ, Santoro AE.

ISME J. 2015 Aug;9(8):1747-63. doi: 10.1038/ismej.2014.260. Epub 2015 Jan 23.

15.

Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": an ammonia-oxidizing archaeon from the open ocean.

Santoro AE, Dupont CL, Richter RA, Craig MT, Carini P, McIlvin MR, Yang Y, Orsi WD, Moran DM, Saito MA.

Proc Natl Acad Sci U S A. 2015 Jan 27;112(4):1173-8. doi: 10.1073/pnas.1416223112. Epub 2015 Jan 13.

16.

Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea.

Santoro AE, Buchwald C, McIlvin MR, Casciotti KL.

Science. 2011 Sep 2;333(6047):1282-5. doi: 10.1126/science.1208239. Epub 2011 Jul 28.

17.

Enrichment and characterization of ammonia-oxidizing archaea from the open ocean: phylogeny, physiology and stable isotope fractionation.

Santoro AE, Casciotti KL.

ISME J. 2011 Nov;5(11):1796-808. doi: 10.1038/ismej.2011.58. Epub 2011 May 12.

18.

Assessment of nitrogen and oxygen isotopic fractionation during nitrification and its expression in the marine environment.

Casciotti KL, Buchwald C, Santoro AE, Frame C.

Methods Enzymol. 2011;486:253-80. doi: 10.1016/B978-0-12-381294-0.00011-0.

PMID:
21185439
19.

Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current.

Santoro AE, Casciotti KL, Francis CA.

Environ Microbiol. 2010 Jul;12(7):1989-2006. doi: 10.1111/j.1462-2920.2010.02205.x. Epub 2010 Mar 23.

PMID:
20345944
20.

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary.

Santoro AE, Francis CA, de Sieyes NR, Boehm AB.

Environ Microbiol. 2008 Apr;10(4):1068-79. doi: 10.1111/j.1462-2920.2007.01547.x. Epub 2008 Feb 3.

PMID:
18266758
21.

Beach sands along the California coast are diffuse sources of fecal bacteria to coastal waters.

Yamahara KM, Layton BA, Santoro AE, Boehm AB.

Environ Sci Technol. 2007 Jul 1;41(13):4515-21.

PMID:
17695890
23.

Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer.

Santoro AE, Boehm AB, Francis CA.

Appl Environ Microbiol. 2006 Mar;72(3):2102-9.

24.

Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean.

Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB.

Proc Natl Acad Sci U S A. 2005 Oct 11;102(41):14683-8. Epub 2005 Sep 26.

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