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Items: 37

1.

Commensal and Pathogenic Members of the Dental Calculus Microbiome of Badia Pozzeveri Individuals from the 11th to 19th Centuries.

Santiago-Rodriguez TM, Fornaciari A, Fornaciari G, Luciani S, Marota I, Vercellotti G, Toranzos GA, Giuffra V, Cano RJ.

Genes (Basel). 2019 Apr 12;10(4). pii: E299. doi: 10.3390/genes10040299.

2.

General Anesthesia Alters the Diversity and Composition of the Intestinal Microbiota in Mice.

Serbanescu MA, Mathena RP, Xu J, Santiago-Rodriguez T, Hartsell TL, Cano RJ, Mintz CD.

Anesth Analg. 2018 Nov 21. doi: 10.1213/ANE.0000000000003938. [Epub ahead of print]

PMID:
30489316
3.

On Controls in Ancient Microbiome Studies, and Microbial Resilience in Ancient Samples.

Santiago-Rodriguez TM, Toranzos GA.

Genes (Basel). 2018 Sep 27;9(10). pii: E471. doi: 10.3390/genes9100471.

4.

Identification and Quantification of DNA Viral Populations in Human Urine Using Next-Generation Sequencing Approaches.

Santiago-Rodriguez TM.

Methods Mol Biol. 2018;1838:191-200. doi: 10.1007/978-1-4939-8682-8_14.

PMID:
30128998
5.

Gut Microbiome and Putative Resistome of Inca and Italian Nobility Mummies.

Santiago-Rodriguez TM, Fornaciari G, Luciani S, Toranzos GA, Marota I, Giuffra V, Cano RJ.

Genes (Basel). 2017 Nov 7;8(11). pii: E310. doi: 10.3390/genes8110310.

6.

Correction: Insights of the dental calculi microbiome of pre-Columbian inhabitants from Puerto Rico.

Santiago-Rodriguez TM, Narganes-Storde Y, Chanlatte-Baik L, Toranzos GA, Cano RJ.

PeerJ. 2017 Jun 6;5. pii: e3277/correction-1. doi: 10.7717/peerj.3277/correction-1. eCollection 2017.

7.

Insights of the dental calculi microbiome of pre-Columbian inhabitants from Puerto Rico.

Santiago-Rodriguez TM, Narganes-Storde Y, Chanlatte-Baik L, Toranzos GA, Cano RJ.

PeerJ. 2017 May 2;5:e3277. doi: 10.7717/peerj.3277. eCollection 2017. Erratum in: PeerJ. 2017 Jun 6;5:.

8.

Proper authentication of ancient DNA is essential, yes; but so are undogmatic approaches.

Toranzos GA, Santiago-Rodriguez TM, Cano RJ, Fornaciari G.

FEMS Microbiol Ecol. 2017 May 1;93(5). doi: 10.1093/femsec/fix043. No abstract available.

PMID:
28402470
9.

Draft Genome Sequence of an Enterococcus faecalis ATCC 19433 Siphovirus Isolated from Raw Domestic Sewage.

Santiago-Rodriguez TM, Ly M, Pride DT, Toranzos GA.

Genome Announc. 2017 Jan 19;5(3). pii: e01179-16. doi: 10.1128/genomeA.01179-16.

10.

Transmission of viruses via our microbiomes.

Ly M, Jones MB, Abeles SR, Santiago-Rodriguez TM, Gao J, Chan IC, Ghose C, Pride DT.

Microbiome. 2016 Dec 2;4(1):64.

11.

Assessing the microbial quality of a tropical watershed with an urbanization gradient using traditional and alternate fecal indicators.

Santiago-Rodriguez TM, Toranzos GA, Arce-Nazario JA.

J Water Health. 2016 Oct;14(5):796-807.

PMID:
27740545
12.

Soil Microbial Forensics.

Santiago-Rodriguez TM, Cano RJ.

Microbiol Spectr. 2016 Aug;4(4). doi: 10.1128/microbiolspec.EMF-0007-2015. Review.

PMID:
27726777
13.

Paleomicrobiology: a Snapshot of Ancient Microbes and Approaches to Forensic Microbiology.

Rivera-Perez JI, Santiago-Rodriguez TM, Toranzos GA.

Microbiol Spectr. 2016 Aug;4(4). doi: 10.1128/microbiolspec.EMF-0006-2015. Review.

14.

Taxonomic and predicted metabolic profiles of the human gut microbiome in pre-Columbian mummies.

Santiago-Rodriguez TM, Fornaciari G, Luciani S, Dowd SE, Toranzos GA, Marota I, Cano RJ.

FEMS Microbiol Ecol. 2016 Nov;92(11). pii: fiw182. doi: 10.1093/femsec/fiw182. Epub 2016 Aug 23.

PMID:
27559027
15.

Microbial diversity in individuals and their household contacts following typical antibiotic courses.

Abeles SR, Jones MB, Santiago-Rodriguez TM, Ly M, Klitgord N, Yooseph S, Nelson KE, Pride DT.

Microbiome. 2016 Jul 30;4(1):39. doi: 10.1186/s40168-016-0187-9.

16.

Potential applications of metagenomics to assess the biological effects of food structure and function.

Santiago-Rodriguez TM, Cano R, Jiménez-Flores R.

Food Funct. 2016 Oct 12;7(10):4160-4169.

PMID:
27386789
17.

Natural mummification of the human gut preserves bacteriophage DNA.

Santiago-Rodriguez TM, Fornaciari G, Luciani S, Dowd SE, Toranzos GA, Marota I, Cano RJ.

FEMS Microbiol Lett. 2016 Jan;363(1):fnv219. doi: 10.1093/femsle/fnv219. Epub 2015 Nov 11.

18.

Chemostat culture systems support diverse bacteriophage communities from human feces.

Santiago-Rodriguez TM, Ly M, Daigneault MC, Brown IH, McDonald JA, Bonilla N, Vercoe EA, Pride DT.

Microbiome. 2015 Nov 9;3:58. doi: 10.1186/s40168-015-0124-3.

19.

Gut Microbiome of an 11th Century A.D. Pre-Columbian Andean Mummy.

Santiago-Rodriguez TM, Fornaciari G, Luciani S, Dowd SE, Toranzos GA, Marota I, Cano RJ.

PLoS One. 2015 Sep 30;10(9):e0138135. doi: 10.1371/journal.pone.0138135. eCollection 2015.

20.

Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes.

Abeles SR, Ly M, Santiago-Rodriguez TM, Pride DT.

PLoS One. 2015 Aug 26;10(8):e0134941. doi: 10.1371/journal.pone.0134941. eCollection 2015.

21.

Transcriptome analysis of bacteriophage communities in periodontal health and disease.

Santiago-Rodriguez TM, Naidu M, Abeles SR, Boehm TK, Ly M, Pride DT.

BMC Genomics. 2015 Jul 28;16:549. doi: 10.1186/s12864-015-1781-0.

22.

Identification of staphylococcal phage with reduced transcription in human blood through transcriptome sequencing.

Santiago-Rodriguez TM, Naidu M, Jones MB, Ly M, Pride DT.

Front Microbiol. 2015 Mar 24;6:216. doi: 10.3389/fmicb.2015.00216. eCollection 2015.

23.

Global transcription of CRISPR loci in the human oral cavity.

Lum AG, Ly M, Santiago-Rodriguez TM, Naidu M, Boehm TK, Pride DT.

BMC Genomics. 2015 May 21;16:401. doi: 10.1186/s12864-015-1615-0.

24.

Bacteriophage and their potential roles in the human oral cavity.

Edlund A, Santiago-Rodriguez TM, Boehm TK, Pride DT.

J Oral Microbiol. 2015 Apr 9;7:27423. doi: 10.3402/jom.v7.27423. eCollection 2015.

25.

The human urine virome in association with urinary tract infections.

Santiago-Rodriguez TM, Ly M, Bonilla N, Pride DT.

Front Microbiol. 2015 Jan 23;6:14. doi: 10.3389/fmicb.2015.00014. eCollection 2015.

26.

Paleomicrobiology: revealing fecal microbiomes of ancient indigenous cultures.

Cano RJ, Rivera-Perez J, Toranzos GA, Santiago-Rodriguez TM, Narganes-Storde YM, Chanlatte-Baik L, García-Roldán E, Bunkley-Williams L, Massey SE.

PLoS One. 2014 Sep 10;9(9):e106833. doi: 10.1371/journal.pone.0106833. eCollection 2014.

27.

Prospective epidemiological pilot study on the morbidity of bathers exposed to tropical recreational waters and sand.

Sánchez-Nazario EE, Santiago-Rodriguez TM, Toranzos GA.

J Water Health. 2014 Jun;12(2):220-9. doi: 10.2166/wh.2014.107.

PMID:
24937216
28.

Altered oral viral ecology in association with periodontal disease.

Ly M, Abeles SR, Boehm TK, Robles-Sikisaka R, Naidu M, Santiago-Rodriguez T, Pride DT.

MBio. 2014 May 20;5(3):e01133-14. doi: 10.1128/mBio.01133-14.

29.

Data on ancient microorganisms causes skepticism.

Cano RJ, Toranzos GA, Santiago-Rodriguez TM, Patricio AR, Rivera JI.

FEMS Microbiol Lett. 2014 Apr;353(2):87-8. doi: 10.1111/1574-6968.12414. Epub 2014 Mar 26. No abstract available.

30.

luxS in bacteria isolated from 25- to 40-million-year-old amber.

Santiago-Rodriguez TM, Patrício AR, Rivera JI, Coradin M, Gonzalez A, Tirado G, Cano RJ, Toranzos GA.

FEMS Microbiol Lett. 2014 Jan;350(1):117-24. doi: 10.1111/1574-6968.12275. Epub 2013 Oct 7.

31.

Sociomicrobiome of wood decay in a tropical rain forest: unraveling complexity.

Santiago-Rodriguez TM, Toranzos GA, Bayman P, Massey SE, Cano RJ.

Springerplus. 2013 Sep 4;2:435. doi: 10.1186/2193-1801-2-435. eCollection 2013.

32.

Antibiotic-resistance and virulence genes in Enterococcus isolated from tropical recreational waters.

Santiago-Rodriguez TM, Rivera JI, Coradin M, Toranzos GA.

J Water Health. 2013 Sep;11(3):387-96. doi: 10.2166/wh.2013.005.

33.

Microbial communities in pre-columbian coprolites.

Santiago-Rodriguez TM, Narganes-Storde YM, Chanlatte L, Crespo-Torres E, Toranzos GA, Jimenez-Flores R, Hamrick A, Cano RJ.

PLoS One. 2013 Jun 5;8(6):e65191. doi: 10.1371/journal.pone.0065191. Print 2013.

34.

Evaluation of Enterococcus-infecting phages as indices of fecal pollution.

Santiago-Rodriguez TM, Marcos P, Monteiro S, Urdaneta M, Santos R, Toranzos GA.

J Water Health. 2013 Mar;11(1):51-63. doi: 10.2166/wh.2012.100.

PMID:
23428549
35.

Microbial quality of tropical inland waters and effects of rainfall events.

Santiago-Rodriguez TM, Tremblay RL, Toledo-Hernandez C, Gonzalez-Nieves JE, Ryu H, Santo Domingo JW, Toranzos GA.

Appl Environ Microbiol. 2012 Aug;78(15):5160-9. doi: 10.1128/AEM.07773-11. Epub 2012 May 18.

36.

Characterization of Enterococcus faecalis-infecting phages (enterophages) as markers of human fecal pollution in recreational waters.

Santiago-Rodríguez TM, Dávila C, González J, Bonilla N, Marcos P, Urdaneta M, Cadete M, Monteiro S, Santos R, Domingo JS, Toranzos GA.

Water Res. 2010 Sep;44(16):4716-25. doi: 10.1016/j.watres.2010.07.078. Epub 2010 Aug 7.

PMID:
20723963
37.

Portuguese man of war: case report.

Morales Torres Y, García-Gubern C, Purcell-Jordán R, Santiago-Rodríguez T, Rodríguez M.

Bol Asoc Med P R. 2004 May-Aug;96(3):147-52. No abstract available.

PMID:
15803969

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