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Items: 1 to 50 of 153

1.

Biogeographic study of human gut-associated crAssphage suggests impacts from industrialization and recent expansion.

Honap TP, Sankaranarayanan K, Schnorr SL, Ozga AT, Warinner C, Lewis CM Jr.

PLoS One. 2020 Jan 15;15(1):e0226930. doi: 10.1371/journal.pone.0226930. eCollection 2020.

2.

Comparison of extraction methods for recovering ancient microbial DNA from paleofeces.

Hagan RW, Hofman CA, Hübner A, Reinhard K, Schnorr S, Lewis CM Jr, Sankaranarayanan K, Warinner CG.

Am J Phys Anthropol. 2020 Feb;171(2):275-284. doi: 10.1002/ajpa.23978. Epub 2019 Nov 30.

PMID:
31785113
3.

Structural and Mechanistic Insights of CRAC Channel as a Drug Target in Autoimmune Disorder.

Bhuvaneshwari S, Sankaranarayanan K.

Curr Drug Targets. 2020;21(1):55-75. doi: 10.2174/1389450120666190926150258.

PMID:
31556856
4.

"The dead shall be raised": Multidisciplinary analysis of human skeletons reveals complexity in 19th century immigrant socioeconomic history and identity in New Haven, Connecticut.

Aronsen GP, Fehren-Schmitz L, Krigbaum J, Kamenov GD, Conlogue GJ, Warinner C, Ozga AT, Sankaranarayanan K, Griego A, DeLuca DW, Eckels HT, Byczkiewicz RK, Grgurich T, Pelletier NA, Brownlee SA, Marichal A, Williamson K, Tonoike Y, Bellantoni NF.

PLoS One. 2019 Sep 9;14(9):e0219279. doi: 10.1371/journal.pone.0219279. eCollection 2019.

5.

Tunable Enzymatic Synthesis of the Immunomodulator Lipid IVA To Enable Structure-Activity Analysis.

Sankaranarayanan K, Antaris XX, Palanski BA, El Gamal A, Kao CM, Fitch WL, Fischer CR, Khosla C.

J Am Chem Soc. 2019 Jun 19;141(24):9474-9478. doi: 10.1021/jacs.9b03066. Epub 2019 Jun 11.

PMID:
31184877
6.

Identification of potential CRAC channel inhibitors: Pharmacophore mapping, 3D-QSAR modelling, and molecular docking approach.

Bhuvaneshwari S, Sankaranarayanan K.

SAR QSAR Environ Res. 2019 Feb;30(2):81-108. doi: 10.1080/1062936X.2019.1566172. Epub 2019 Feb 18.

PMID:
30773908
7.

Perceived Value of the Daily Safety Briefing.

Sankaranarayanan K.

J Healthc Manag. 2019 Jan-Feb;64(1):52-53. doi: 10.1097/JHM-D-18-00253. No abstract available.

PMID:
30608485
8.

The efficacy of whole human genome capture on ancient dental calculus and dentin.

Ziesemer KA, Ramos-Madrigal J, Mann AE, Brandt BW, Sankaranarayanan K, Ozga AT, Hoogland M, Hofman CA, Salazar-García DC, Frohlich B, Milner GR, Stone AC, Aldenderfer M, Lewis CM Jr, Hofman CL, Warinner C, Schroeder H.

Am J Phys Anthropol. 2019 Mar;168(3):496-509. doi: 10.1002/ajpa.23763. Epub 2018 Dec 26.

9.

Water channel activity of putative aquaporin-6 present in Aedes aegypti.

Sreedharan S, Sankaranarayanan K.

Arch Insect Biochem Physiol. 2019 Jan;100(1):e21519. doi: 10.1002/arch.21519. Epub 2018 Nov 19.

PMID:
30456765
10.

Thalidomide remodels developing heart in chick embryo: discovery of a thalidomide mediated hematoma in heart muscle.

Kumar P, Kumar HA, Sundaresan L, Ghosh A, Kathirvel P, Thilak A, Katakia YT, Sankaranarayanan K, Chatterjee S.

Naunyn Schmiedebergs Arch Pharmacol. 2018 Oct;391(10):1093-1105. doi: 10.1007/s00210-018-1532-2. Epub 2018 Jul 7.

PMID:
29982937
11.

Differential preservation of endogenous human and microbial DNA in dental calculus and dentin.

Mann AE, Sabin S, Ziesemer K, Vågene ÅJ, Schroeder H, Ozga AT, Sankaranarayanan K, Hofman CA, Fellows Yates JA, Salazar-García DC, Frohlich B, Aldenderfer M, Hoogland M, Read C, Milner GR, Stone AC, Lewis CM Jr, Krause J, Hofman C, Bos KI, Warinner C.

Sci Rep. 2018 Jun 29;8(1):9822. doi: 10.1038/s41598-018-28091-9.

12.

In Silico Analysis of Natural Resistance-Associated Macrophage Protein (NRAMP) Family of Transporters in Rice.

Mani A, Sankaranarayanan K.

Protein J. 2018 Jun;37(3):237-247. doi: 10.1007/s10930-018-9773-y.

PMID:
29785641
13.

Functional characterisation of bioactive peptide derived from terrestrial snail Cryptozona bistrialis and its wound-healing property in normal and diabetic-induced Wistar albino rats.

Ulagesan S, Sankaranarayanan K, Kuppusamy A.

Int Wound J. 2018 Jun;15(3):350-362. doi: 10.1111/iwj.12872. Epub 2018 Feb 26.

PMID:
29480558
14.

Biological synthesis of silver nanoparticles using β-1, 3 glucan binding protein and their antibacterial, antibiofilm and cytotoxic potential.

Anjugam M, Vaseeharan B, Iswarya A, Divya M, Prabhu NM, Sankaranarayanan K.

Microb Pathog. 2018 Feb;115:31-40. doi: 10.1016/j.micpath.2017.12.003. Epub 2017 Dec 5.

PMID:
29208541
15.

The dental calculus metabolome in modern and historic samples.

Velsko IM, Overmyer KA, Speller C, Klaus L, Collins MJ, Loe L, Frantz LAF, Sankaranarayanan K, Lewis CM Jr, Martinez JBR, Chaves E, Coon JJ, Larson G, Warinner C.

Metabolomics. 2017;13(11):134. doi: 10.1007/s11306-017-1270-3. Epub 2017 Oct 3.

16.

Biosynthesis and structure-activity relationships of the lipid a family of glycolipids.

Xiao X, Sankaranarayanan K, Khosla C.

Curr Opin Chem Biol. 2017 Oct;40:127-137. doi: 10.1016/j.cbpa.2017.07.008. Epub 2017 Sep 20. Review.

17.

A comparison of aquaporin function in mediating stomatal aperture gating among drought-tolerant and sensitive varieties of rice (Oryza sativa L.).

Vinnakota R, Ramakrishnan AM, Samdani A, Venugopal MA, Ram BS, Krishnan SN, Murugesan D, Sankaranarayanan K.

Protoplasma. 2016 Nov;253(6):1593-1597. Epub 2015 Dec 2.

PMID:
26631017
18.

Insights into human evolution from ancient and contemporary microbiome studies.

Schnorr SL, Sankaranarayanan K, Lewis CM Jr, Warinner C.

Curr Opin Genet Dev. 2016 Dec;41:14-26. doi: 10.1016/j.gde.2016.07.003. Epub 2016 Aug 6. Review.

19.

Oral microbiome diversity among Cheyenne and Arapaho individuals from Oklahoma.

Ozga AT, Sankaranarayanan K, Tito RY, Obregon-Tito AJ, Foster MW, Tallbull G, Spicer P, Warinner CG, Lewis CM Jr.

Am J Phys Anthropol. 2016 Oct;161(2):321-7. doi: 10.1002/ajpa.23033. Epub 2016 Jun 30.

PMID:
27357925
20.

Corrigendum: Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.

Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C.

Sci Rep. 2016 Jun 2;6:27163. doi: 10.1038/srep27163. No abstract available.

21.

Role of Interfacial Viscosity and pH in L-Phenylalanine, L-Tryptophan Molecular Rotors.

Meenakshisundaram N, Sankaranarayanan K.

Guang Pu Xue Yu Guang Pu Fen Xi. 2016 May;36(5):1629-33.

PMID:
30001074
22.

Advanced glycation end products induce differential structural modifications and fibrillation of albumin.

Awasthi S, Sankaranarayanan K, Saraswathi NT.

Spectrochim Acta A Mol Biomol Spectrosc. 2016 Jun 15;163:60-7. doi: 10.1016/j.saa.2016.03.023. Epub 2016 Mar 22.

PMID:
27037764
23.

Successful enrichment and recovery of whole mitochondrial genomes from ancient human dental calculus.

Ozga AT, Nieves-Colón MA, Honap TP, Sankaranarayanan K, Hofman CA, Milner GR, Lewis CM Jr, Stone AC, Warinner C.

Am J Phys Anthropol. 2016 Jun;160(2):220-8. doi: 10.1002/ajpa.22960. Epub 2016 Mar 16.

24.

Structural insights into the Aedes aegypti aquaporins and aquaglyceroporins - an in silico study.

Sreedharan S, Kothandan G, Sankaranarayanan K.

J Recept Signal Transduct Res. 2016 Dec;36(6):543-557. Epub 2016 Feb 24.

PMID:
26906718
25.

Glu106 targeted inhibitors of ORAI1 as potential Ca2+ release-activated Ca2+ (CRAC) channel blockers - molecular modeling and docking studies.

Sampath B, Sankaranarayanan K.

J Recept Signal Transduct Res. 2016 Dec;36(6):572-585. Epub 2016 Feb 19.

PMID:
26895524
26.

Understanding autoimmunity: The ion channel perspective.

RamaKrishnan AM, Sankaranarayanan K.

Autoimmun Rev. 2016 Jul;15(7):585-620. doi: 10.1016/j.autrev.2016.02.004. Epub 2016 Feb 12. Review.

PMID:
26854401
27.

Harvesting clues from genome wide transcriptome analysis for exploring thalidomide mediated anomalies in eye development of chick embryo: Nitric oxide rectifies the thalidomide mediated anomalies by swinging back the system to normal transcriptome pattern.

Kumar P, Kasiviswanathan D, Sundaresan L, Kathirvel P, Veeriah V, Dutta P, Sankaranarayanan K, Gupta R, Chatterjee S.

Biochimie. 2016 Feb;121:253-67. doi: 10.1016/j.biochi.2015.12.013. Epub 2015 Dec 21.

PMID:
26717904
28.

Gut Microbiome Diversity among Cheyenne and Arapaho Individuals from Western Oklahoma.

Sankaranarayanan K, Ozga AT, Warinner C, Tito RY, Obregon-Tito AJ, Xu J, Gaffney PM, Jervis LL, Cox D, Stephens L, Foster M, Tallbull G, Spicer P, Lewis CM.

Curr Biol. 2015 Dec 21;25(24):3161-9. doi: 10.1016/j.cub.2015.10.060. Epub 2015 Dec 6.

29.

Obituary.

Ács N, Bánhidy F, Sankaranarayanan K, Merhala Z.

J Matern Fetal Neonatal Med. 2016;29(1):169-71. doi: 10.3109/14767058.2015.1121952. No abstract available.

PMID:
26612012
30.

Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.

Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C.

Sci Rep. 2015 Nov 13;5:16498. doi: 10.1038/srep16498. Erratum in: Sci Rep. 2016 Jun 02;6:27163.

31.

Andrew E. Czeizel, 3 April 1935-10 August 2015.

Ács N, Bánhidy F, Sankaranarayanan K, Merhala Z.

Congenit Anom (Kyoto). 2016 Jan;56(1):4-5. doi: 10.1111/cga.12141. No abstract available.

PMID:
26526394
32.

Does L to D-amino acid substitution trigger helix→sheet conformations in collagen like peptides adsorbed to surfaces?

Velmurugan P, Jonnalagadda RR, Sankaranarayanan K, Dhathathreyan A.

Mater Sci Eng C Mater Biol Appl. 2015 Dec 1;57:249-56. doi: 10.1016/j.msec.2015.07.057. Epub 2015 Aug 1.

PMID:
26354261
33.

Role of viscogens on the macromolecular assemblies of fibrinogen at liquid/air and solid/air interfaces.

Sankaranarayanan K.

Biointerphases. 2015 Jun 10;10(2):021009. doi: 10.1116/1.4922291.

PMID:
26062547
34.

Genome-based, mechanism-driven computational modeling of risks of ionizing radiation: The next frontier in genetic risk estimation?

Sankaranarayanan K, Nikjoo H.

Mutat Res Rev Mutat Res. 2015 Apr-Jun;764:1-15. doi: 10.1016/j.mrrev.2014.12.003. Epub 2014 Dec 31.

PMID:
26041262
35.

Subsistence strategies in traditional societies distinguish gut microbiomes.

Obregon-Tito AJ, Tito RY, Metcalf J, Sankaranarayanan K, Clemente JC, Ursell LK, Zech Xu Z, Van Treuren W, Knight R, Gaffney PM, Spicer P, Lawson P, Marin-Reyes L, Trujillo-Villarroel O, Foster M, Guija-Poma E, Troncoso-Corzo L, Warinner C, Ozga AT, Lewis CM.

Nat Commun. 2015 Mar 25;6:6505. doi: 10.1038/ncomms7505.

36.

Characterization of ancient DNA supports long-term survival of Haloarchaea.

Sankaranarayanan K, Lowenstein TK, Timofeeff MN, Schubert BA, Lum JK.

Astrobiology. 2014 Jul;14(7):553-60. doi: 10.1089/ast.2014.1173. Epub 2014 Jun 30.

37.

State of the art in research into the risk of low dose radiation exposure.

Nikjoo H, Sankaranarayanan K.

J Radiol Prot. 2014 Mar;34(1):253-8. doi: 10.1088/0952-4746/34/1/L01. Epub 2014 Mar 4. No abstract available.

PMID:
24595009
38.
39.

The non-homologous end-joining (NHEJ) mathematical model for the repair of double-strand breaks: II. Application to damage induced by ultrasoft X rays and low-energy electrons.

Taleei R, Girard PM, Sankaranarayanan K, Nikjoo H.

Radiat Res. 2013 May;179(5):540-8. doi: 10.1667/RR3124.1. Epub 2013 Apr 5.

PMID:
23560631
40.

Microviscosity-induced conformational transition in β-lactoglobulin in the presence of an ionic liquid.

Sankaranarayanan K, Sreedhar B, Nair BU, Dhathathreyan A.

J Phys Chem B. 2013 Feb 7;117(5):1234-40. doi: 10.1021/jp310198f. Epub 2013 Jan 29.

PMID:
23320825
41.

Reversible and irreversible conformational transitions in myoglobin: role of hydrated amino acid ionic liquid.

Sankaranarayanan K, Sathyaraj G, Nair BU, Dhathathreyan A.

J Phys Chem B. 2012 Apr 12;116(14):4175-80. doi: 10.1021/jp300596z. Epub 2012 Apr 2.

PMID:
22444298
42.

Interfacial viscoelasticity of myoglobin at air/water and air/solution interfaces: role of folding and clustering.

Sankaranarayanan K, Dhathathreyan A, Krägel J, Miller R.

J Phys Chem B. 2012 Jan 19;116(2):895-902. doi: 10.1021/jp2100733. Epub 2012 Jan 4.

PMID:
22176527
43.

Evaluation of hydropathy of amino acids from a comparison of their viscosities inside vesicles and on supported lipid bilayers.

Sankaranarayanan K, Dhathathreyan A.

Colloids Surf B Biointerfaces. 2012 Mar 1;91:63-7. doi: 10.1016/j.colsurfb.2011.10.038. Epub 2011 Oct 25.

PMID:
22118892
44.

Inherited and somatic mitochondrial DNA mutations in Guam amyotrophic lateral sclerosis and parkinsonism-dementia.

Reiff DM, Spathis R, Chan CW, Vilar MG, Sankaranarayanan K, Lynch D, Ehrlich E, Kerath S, Chowdhury R, Robinowitz L, Koji Lum J, Garruto RM.

Neurol Sci. 2011 Oct;32(5):883-92. doi: 10.1007/s10072-011-0735-9. Epub 2011 Aug 6.

PMID:
21822691
45.

Ancient microbes from halite fluid inclusions: optimized surface sterilization and DNA extraction.

Sankaranarayanan K, Timofeeff MN, Spathis R, Lowenstein TK, Lum JK.

PLoS One. 2011;6(6):e20683. doi: 10.1371/journal.pone.0020683. Epub 2011 Jun 9.

46.

"Humanized" stem cell culture techniques: the animal serum controversy.

Tekkatte C, Gunasingh GP, Cherian KM, Sankaranarayanan K.

Stem Cells Int. 2011;2011:504723. doi: 10.4061/2011/504723. Epub 2011 Apr 3.

47.

WITHDRAWN: Humanised substitutes for animal sera in human mesenchymal stem cell culture and differentiation.

Sankaranarayanan K, Chandana T, Ponrose G, Malini V, Prithika U, Renny CM, Raghavan U, Sai Babu R, Guhathakurta S, Cherian KM.

Cell Biol Int. 2011 Apr 15. [Epub ahead of print]

PMID:
21492095
48.

Patient safety: patient identification wristband errors.

Dhatt GS, Damir HA, Matarelli S, Sankaranarayanan K, James DM.

Clin Chem Lab Med. 2011 May;49(5):927-9. doi: 10.1515/CCLM.2011.129. Epub 2011 Feb 3. No abstract available.

PMID:
21288177
49.

Ionising radiation and genetic risks. XVI. A genome-based framework for risk estimation in the light of recent advances in genome research.

Sankaranarayanan K, Nikjoo H.

Int J Radiat Biol. 2011 Feb;87(2):161-78. doi: 10.3109/09553002.2010.518214. Epub 2010 Nov 10. Review.

PMID:
21067302
50.

Interaction of chromium(III) complexes with model lipid bilayers: implications on cellular uptake.

Raja NS, Sankaranarayanan K, Dhathathreyan A, Nair BU.

Biochim Biophys Acta. 2011 Jan;1808(1):332-40. doi: 10.1016/j.bbamem.2010.09.015. Epub 2010 Oct 13.

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