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Items: 29

1.

Complete Genome Sequences of Four Serotypes of Dengue Virus Prototype Continuously Maintained in the Laboratory.

Chin-Inmanu K, Suttitheptumrong A, Sangsrakru D, Mairiang D, Tangphatsornruang S, Malasit P, Suriyaphol P.

Microbiol Resour Announc. 2019 May 9;8(19). pii: e00199-19. doi: 10.1128/MRA.00199-19.

2.

Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.

Piriyapongsa J, Kaewprommal P, Vaiwsri S, Anuntakarun S, Wirojsirasak W, Punpee P, Klomsa-Ard P, Shaw PJ, Pootakham W, Yoocha T, Sangsrakru D, Tangphatsornruang S, Tongsima S, Tragoonrung S.

PeerJ. 2018 Oct 30;6:e5818. doi: 10.7717/peerj.5818. eCollection 2018.

3.

Dynamics of coral-associated microbiomes during a thermal bleaching event.

Pootakham W, Mhuantong W, Putchim L, Yoocha T, Sonthirod C, Kongkachana W, Sangsrakru D, Naktang C, Jomchai N, Thongtham N, Tangphatsornruang S.

Microbiologyopen. 2018 Oct;7(5):e00604. doi: 10.1002/mbo3.604. Epub 2018 Mar 23.

4.

Transcriptome-based discovery of pathways and genes related to reproduction of the black tiger shrimp (Penaeus monodon).

Uengwetwanit T, Ponza P, Sangsrakru D, Wichadakul D, Ingsriswang S, Leelatanawit R, Klinbunga S, Tangphatsornruang S, Karoonuthaisiri N.

Mar Genomics. 2018 Feb;37:69-73. doi: 10.1016/j.margen.2017.08.007. Epub 2017 Sep 9.

PMID:
28899645
5.

Targeted disruption of the polyketide synthase gene pks15 affects virulence against insects and phagocytic survival in the fungus Beauveria bassiana.

Toopaang W, Phonghanpot S, Punya J, Panyasiri C, Klamchao K, Wasuwan R, Srisuksam C, Sangsrakru D, Sonthirod C, Tangphatsornruang S, Tanticharoen M, Amnuaykanjanasin A.

Fungal Biol. 2017 Aug;121(8):664-675. doi: 10.1016/j.funbio.2017.04.007. Epub 2017 May 6.

PMID:
28705395
6.

De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species.

Pootakham W, Sonthirod C, Naktang C, Ruang-Areerate P, Yoocha T, Sangsrakru D, Theerawattanasuk K, Rattanawong R, Lekawipat N, Tangphatsornruang S.

Sci Rep. 2017 Feb 2;7:41457. doi: 10.1038/srep41457.

8.

The two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads.

Shearman JR, Sonthirod C, Naktang C, Pootakham W, Yoocha T, Sangsrakru D, Jomchai N, Tragoonrung S, Tangphatsornruang S.

Sci Rep. 2016 Aug 17;6:31533. doi: 10.1038/srep31533.

9.

Comparative mitochondrial genome analysis of Pythium insidiosum and related oomycete species provides new insights into genetic variation and phylogenetic relationships.

Tangphatsornruang S, Ruang-Areerate P, Sangsrakru D, Rujirawat T, Lohnoo T, Kittichotirat W, Patumcharoenpol P, Grenville-Briggs LJ, Krajaejun T.

Gene. 2016 Jan 1;575(1):34-41. doi: 10.1016/j.gene.2015.08.036. Epub 2015 Aug 21.

PMID:
26299654
10.

Construction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS).

Pootakham W, Ruang-Areerate P, Jomchai N, Sonthirod C, Sangsrakru D, Yoocha T, Theerawattanasuk K, Nirapathpongporn K, Romruensukharom P, Tragoonrung S, Tangphatsornruang S.

Front Plant Sci. 2015 May 27;6:367. doi: 10.3389/fpls.2015.00367. eCollection 2015.

11.

SNP identification from RNA sequencing and linkage map construction of rubber tree for anchoring the draft genome.

Shearman JR, Sangsrakru D, Jomchai N, Ruang-Areerate P, Sonthirod C, Naktang C, Theerawattanasuk K, Tragoonrung S, Tangphatsornruang S.

PLoS One. 2015 Apr 1;10(4):e0121961. doi: 10.1371/journal.pone.0121961. eCollection 2015.

12.

Genome-wide SNP discovery and identification of QTL associated with agronomic traits in oil palm using genotyping-by-sequencing (GBS).

Pootakham W, Jomchai N, Ruang-Areerate P, Shearman JR, Sonthirod C, Sangsrakru D, Tragoonrung S, Tangphatsornruang S.

Genomics. 2015 May;105(5-6):288-95. doi: 10.1016/j.ygeno.2015.02.002. Epub 2015 Feb 20.

13.

Large-scale SNP discovery through RNA sequencing and SNP genotyping by targeted enrichment sequencing in cassava (Manihot esculenta Crantz).

Pootakham W, Shearman JR, Ruang-Areerate P, Sonthirod C, Sangsrakru D, Jomchai N, Yoocha T, Triwitayakorn K, Tragoonrung S, Tangphatsornruang S.

PLoS One. 2014 Dec 31;9(12):e116028. doi: 10.1371/journal.pone.0116028. eCollection 2014.

14.

Elucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling.

Juntawong P, Sirikhachornkit A, Pimjan R, Sonthirod C, Sangsrakru D, Yoocha T, Tangphatsornruang S, Srinives P.

Front Plant Sci. 2014 Dec 2;5:658. doi: 10.3389/fpls.2014.00658. eCollection 2014.

15.

The AKR gene family and modifying sex ratios in palms through abiotic stress responsiveness.

Somyong S, Poopear S, Jomchai N, Uthaipaisanwong P, Ruang-Areerate P, Sangsrakru D, Sonthirod C, Ukoskit K, Tragoonrung S, Tangphatsornruang S.

Funct Integr Genomics. 2015 May;15(3):349-62. doi: 10.1007/s10142-014-0423-y. Epub 2014 Dec 12.

PMID:
25504196
16.

Structural and functional diversity of free-living microorganisms in reef surface, Kra island, Thailand.

Somboonna N, Wilantho A, Assawamakin A, Monanunsap S, Sangsrakru D, Tangphatsornruang S, Tongsima S.

BMC Genomics. 2014 Jul 18;15:607. doi: 10.1186/1471-2164-15-607.

17.

Characterization of rubber tree microRNA in phytohormone response using large genomic DNA libraries, promoter sequence and gene expression analysis.

Kanjanawattanawong S, Tangphatsornruang S, Triwitayakorn K, Ruang-areerate P, Sangsrakru D, Poopear S, Somyong S, Narangajavana J.

Mol Genet Genomics. 2014 Oct;289(5):921-33. doi: 10.1007/s00438-014-0862-0. Epub 2014 May 26.

PMID:
24859131
18.

Microbial ecology of Thailand tsunami and non-tsunami affected terrestrials.

Somboonna N, Wilantho A, Jankaew K, Assawamakin A, Sangsrakru D, Tangphatsornruang S, Tongsima S.

PLoS One. 2014 Apr 7;9(4):e94236. doi: 10.1371/journal.pone.0094236. eCollection 2014.

19.

Assembly and analysis of a male sterile rubber tree mitochondrial genome reveals DNA rearrangement events and a novel transcript.

Shearman JR, Sangsrakru D, Ruang-Areerate P, Sonthirod C, Uthaipaisanwong P, Yoocha T, Poopear S, Theerawattanasuk K, Tragoonrung S, Tangphatsornruang S.

BMC Plant Biol. 2014 Feb 10;14:45. doi: 10.1186/1471-2229-14-45.

20.

Transcriptome analysis of normal and mantled developing oil palm flower and fruit.

Shearman JR, Jantasuriyarat C, Sangsrakru D, Yoocha T, Vannavichit A, Tragoonrung S, Tangphatsornruang S.

Genomics. 2013 May;101(5):306-12. doi: 10.1016/j.ygeno.2013.02.012. Epub 2013 Mar 5.

21.

Feasibility of using 454 pyrosequencing for studying quasispecies of the whole dengue viral genome.

Chin-inmanu K, Suttitheptumrong A, Sangsrakru D, Tangphatsornruang S, Tragoonrung S, Malasit P, Tungpradabkul S, Suriyaphol P.

BMC Genomics. 2012;13 Suppl 7:S7. doi: 10.1186/1471-2164-13-S7-S7. Epub 2012 Dec 13.

22.

Draft genome sequence of Arthrospira platensis C1 (PCC9438).

Cheevadhanarak S, Paithoonrangsarid K, Prommeenate P, Kaewngam W, Musigkain A, Tragoonrung S, Tabata S, Kaneko T, Chaijaruwanich J, Sangsrakru D, Tangphatsornruang S, Chanprasert J, Tongsima S, Kusonmano K, Jeamton W, Dulsawat S, Klanchui A, Vorapreeda T, Chumchua V, Khannapho C, Thammarongtham C, Plengvidhya V, Subudhi S, Hongsthong A, Ruengjitchatchawalya M, Meechai A, Senachak J, Tanticharoen M.

Stand Genomic Sci. 2012 Mar 19;6(1):43-53. doi: 10.4056/sigs.2525955. Epub 2012 Mar 5.

23.

Characterization of the chloroplast genome sequence of oil palm (Elaeis guineensis Jacq.).

Uthaipaisanwong P, Chanprasert J, Shearman JR, Sangsrakru D, Yoocha T, Jomchai N, Jantasuriyarat C, Tragoonrung S, Tangphatsornruang S.

Gene. 2012 Jun 1;500(2):172-80. doi: 10.1016/j.gene.2012.03.061. Epub 2012 Apr 2.

PMID:
22487870
24.

SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis.

Tranbarger TJ, Kluabmongkol W, Sangsrakru D, Morcillo F, Tregear JW, Tragoonrung S, Billotte N.

BMC Plant Biol. 2012 Jan 3;12:1. doi: 10.1186/1471-2229-12-1.

25.

Transcriptome sequencing of Hevea brasiliensis for development of microsatellite markers and construction of a genetic linkage map.

Triwitayakorn K, Chatkulkawin P, Kanjanawattanawong S, Sraphet S, Yoocha T, Sangsrakru D, Chanprasert J, Ngamphiw C, Jomchai N, Therawattanasuk K, Tangphatsornruang S.

DNA Res. 2011 Dec;18(6):471-82. doi: 10.1093/dnares/dsr034. Epub 2011 Nov 14.

26.

Single nucleotide polymorphism marker development in the rubber tree, Hevea brasiliensis (Euphorbiaceae).

Pootakham W, Chanprasert J, Jomchai N, Sangsrakru D, Yoocha T, Therawattanasuk K, Tangphatsornruang S.

Am J Bot. 2011 Nov;98(11):e337-8. doi: 10.3732/ajb.1100228. Epub 2011 Oct 24.

27.

Characterization of the complete chloroplast genome of Hevea brasiliensis reveals genome rearrangement, RNA editing sites and phylogenetic relationships.

Tangphatsornruang S, Uthaipaisanwong P, Sangsrakru D, Chanprasert J, Yoocha T, Jomchai N, Tragoonrung S.

Gene. 2011 Apr 15;475(2):104-12. doi: 10.1016/j.gene.2011.01.002. Epub 2011 Jan 15.

PMID:
21241787
28.

The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: structural organization and phylogenetic relationships.

Tangphatsornruang S, Sangsrakru D, Chanprasert J, Uthaipaisanwong P, Yoocha T, Jomchai N, Tragoonrung S.

DNA Res. 2010 Feb;17(1):11-22. doi: 10.1093/dnares/dsp025. Epub 2009 Dec 10.

29.

Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek).

Tangphatsornruang S, Somta P, Uthaipaisanwong P, Chanprasert J, Sangsrakru D, Seehalak W, Sommanas W, Tragoonrung S, Srinives P.

BMC Plant Biol. 2009 Nov 24;9:137. doi: 10.1186/1471-2229-9-137.

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