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Items: 12

1.

Changes in store for early-stage non-small cell lung cancer.

Sandler JE, D'Aiello A, Halmos B.

J Thorac Dis. 2019 May;11(5):2117-2125. doi: 10.21037/jtd.2019.05.34. Review.

2.

A Developmental Program Truncates Long Transcripts to Temporally Regulate Cell Signaling.

Sandler JE, Irizarry J, Stepanik V, Dunipace L, Amrhein H, Stathopoulos A.

Dev Cell. 2018 Dec 17;47(6):773-784.e6. doi: 10.1016/j.devcel.2018.11.019.

PMID:
30562515
3.

Biomarker use in lung cancer management: expanding horizons.

Sandler JE, Kaumaya M, Halmos B.

Biomark Med. 2018 Apr;12(4):315-320. doi: 10.2217/bmm-2018-0028. Epub 2018 Mar 23. No abstract available.

PMID:
29569465
4.

Germline Variants in DNA Repair Genes, Diagnostic Radiation, and Risk of Thyroid Cancer.

Sandler JE, Huang H, Zhao N, Wu W, Liu F, Ma S, Udelsman R, Zhang Y.

Cancer Epidemiol Biomarkers Prev. 2018 Mar;27(3):285-294. doi: 10.1158/1055-9965.EPI-17-0319. Epub 2017 Dec 20.

5.

Stepwise Progression of Embryonic Patterning.

Sandler JE, Stathopoulos A.

Trends Genet. 2016 Jul;32(7):432-443. doi: 10.1016/j.tig.2016.04.004. Epub 2016 May 24. Review.

6.

Quantitative Single-Embryo Profile of Drosophila Genome Activation and the Dorsal-Ventral Patterning Network.

Sandler JE, Stathopoulos A.

Genetics. 2016 Apr;202(4):1575-84. doi: 10.1534/genetics.116.186783. Epub 2016 Feb 19.

7.

Identification of germline transcriptional regulatory elements in Aedes aegypti.

Akbari OS, Papathanos PA, Sandler JE, Kennedy K, Hay BA.

Sci Rep. 2014 Feb 4;4:3954. doi: 10.1038/srep03954.

8.

Microfluidic on-chip capture-cycloaddition reaction to reversibly immobilize small molecules or multi-component structures for biosensor applications.

Tassa C, Liong M, Hilderbrand S, Sandler JE, Reiner T, Keliher EJ, Weissleder R, Shaw SY.

J Vis Exp. 2013 Sep 23;(79):e50772. doi: 10.3791/50772.

9.

On-chip bioorthogonal chemistry enables immobilization of in situ modified nanoparticles and small molecules for label-free monitoring of protein binding and reaction kinetics.

Tassa C, Liong M, Hilderbrand S, Sandler JE, Reiner T, Keliher EJ, Weissleder R, Shaw SY.

Lab Chip. 2012 Sep 7;12(17):3103-10. doi: 10.1039/c2lc40337d. Epub 2012 Jul 3.

10.

The developmental transcriptome of Drosophila melanogaster.

Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, Lin W, Malone JH, Mattiuzzo NR, Miller D, Sturgill D, Tuch BB, Zaleski C, Zhang D, Blanchette M, Dudoit S, Eads B, Green RE, Hammonds A, Jiang L, Kapranov P, Langton L, Perrimon N, Sandler JE, Wan KH, Willingham A, Zhang Y, Zou Y, Andrews J, Bickel PJ, Brenner SE, Brent MR, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Oliver B, Celniker SE.

Nature. 2011 Mar 24;471(7339):473-9. doi: 10.1038/nature09715. Epub 2010 Dec 22.

11.

Identification of functional elements and regulatory circuits by Drosophila modENCODE.

modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP, Kellis M.

Science. 2010 Dec 24;330(6012):1787-97. doi: 10.1126/science.1198374. Epub 2010 Dec 22.

12.

Genome-wide analysis of promoter architecture in Drosophila melanogaster.

Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, Bickel PJ, Carninci P, Carlson JW, Celniker SE.

Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22.

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