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Items: 39

1.

Community-wide scan identifies fish species associated with coral reef services across the Indo-Pacific.

Maire E, Villéger S, Graham NAJ, Hoey AS, Cinner J, Ferse SCA, Aliaume C, Booth DJ, Feary DA, Kulbicki M, Sandin SA, Vigliola L, Mouillot D.

Proc Biol Sci. 2018 Jul 25;285(1883). pii: 20181167. doi: 10.1098/rspb.2018.1167.

PMID:
30051872
2.

Gravity of human impacts mediates coral reef conservation gains.

Cinner JE, Maire E, Huchery C, MacNeil MA, Graham NAJ, Mora C, McClanahan TR, Barnes ML, Kittinger JN, Hicks CC, D'Agata S, Hoey AS, Gurney GG, Feary DA, Williams ID, Kulbicki M, Vigliola L, Wantiez L, Edgar GJ, Stuart-Smith RD, Sandin SA, Green A, Hardt MJ, Beger M, Friedlander AM, Wilson SK, Brokovich E, Brooks AJ, Cruz-Motta JJ, Booth DJ, Chabanet P, Gough C, Tupper M, Ferse SCA, Sumaila UR, Pardede S, Mouillot D.

Proc Natl Acad Sci U S A. 2018 Jul 3;115(27):E6116-E6125. doi: 10.1073/pnas.1708001115. Epub 2018 Jun 18.

3.

Human impacts decouple a fundamental ecological relationship-The positive association between host diversity and parasite diversity.

Wood CL, Zgliczynski BJ, Haupt AJ, Guerra AS, Micheli F, Sandin SA.

Glob Chang Biol. 2018 Aug;24(8):3666-3679. doi: 10.1111/gcb.14159. Epub 2018 May 20.

PMID:
29781155
4.

On the prevalence and dynamics of inverted trophic pyramids and otherwise top-heavy communities.

McCauley DJ, Gellner G, Martinez ND, Williams RJ, Sandin SA, Micheli F, Mumby PJ, McCann KS.

Ecol Lett. 2018 Mar;21(3):439-454. doi: 10.1111/ele.12900. Epub 2018 Jan 9. Review.

PMID:
29316114
5.

Ecological assessment of the marine ecosystems of Barbuda, West Indies: Using rapid scientific assessment to inform ocean zoning and fisheries management.

Ruttenberg B, Caselle JE, Estep AJ, Johnson AE, Marhaver KL, Richter LJ, Sandin SA, Vermeij MJA, Smith JE, Grenda D, Cannon A.

PLoS One. 2018 Jan 8;13(1):e0189355. doi: 10.1371/journal.pone.0189355. eCollection 2018.

6.

Porites superfusa mortality and recovery from a bleaching event at Palmyra Atoll, USA.

Furby KA, Smith JE, Sandin SA.

PeerJ. 2017 May 2;5:e3204. doi: 10.7717/peerj.3204. eCollection 2017.

7.

Herbivore space use influences coral reef recovery.

Eynaud Y, McNamara DE, Sandin SA.

R Soc Open Sci. 2016 Jun 29;3(6):160262. doi: 10.1098/rsos.160262. eCollection 2016 Jun.

8.

Bright spots among the world’s coral reefs.

Cinner JE, Huchery C, MacNeil MA, Graham NA, McClanahan TR, Maina J, Maire E, Kittinger JN, Hicks CC, Mora C, Allison EH, D'Agata S, Hoey A, Feary DA, Crowder L, Williams ID, Kulbicki M, Vigliola L, Wantiez L, Edgar G, Stuart-Smith RD, Sandin SA, Green AL, Hardt MJ, Beger M, Friedlander A, Campbell SJ, Holmes KE, Wilson SK, Brokovich E, Brooks AJ, Cruz-Motta JJ, Booth DJ, Chabanet P, Gough C, Tupper M, Ferse SC, Sumaila UR, Mouillot D.

Nature. 2016 Jul 21;535(7612):416-9. Epub 2016 Jun 15.

9.

Reef Fish Survey Techniques: Assessing the Potential for Standardizing Methodologies.

Caldwell ZR, Zgliczynski BJ, Williams GJ, Sandin SA.

PLoS One. 2016 Apr 25;11(4):e0153066. doi: 10.1371/journal.pone.0153066. eCollection 2016.

10.

Evaluation of the global impacts of mitigation on persistent, bioaccumulative and toxic pollutants in marine fish.

Bonito LT, Hamdoun A, Sandin SA.

PeerJ. 2016 Jan 28;4:e1573. doi: 10.7717/peerj.1573. eCollection 2016.

11.

Can we measure beauty? Computational evaluation of coral reef aesthetics.

Haas AF, Guibert M, Foerschner A, Co T, Calhoun S, George E, Hatay M, Dinsdale E, Sandin SA, Smith JE, Vermeij MJ, Felts B, Dustan P, Salamon P, Rohwer F.

PeerJ. 2015 Nov 10;3:e1390. doi: 10.7717/peerj.1390. eCollection 2015.

12.

Productivity and fishing pressure drive variability in fish parasite assemblages of the Line Islands, equatorial Pacific.

Wood CL, Baum JK, Reddy SM, Trebilco R, Sandin SA, Zgliczynski BJ, Briggs AA, Micheli F.

Ecology. 2015 May;96(5):1383-98.

PMID:
26236851
13.

The origins of ambient biological sound from coral reef ecosystems in the Line Islands archipelago.

Freeman SE, Rohwer FL, D'Spain GL, Friedlander AM, Gregg AK, Sandin SA, Buckingham MJ.

J Acoust Soc Am. 2014 Apr;135(4):1775-88. doi: 10.1121/1.4865922.

PMID:
25234977
14.

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition.

Lim YW, Cuevas DA, Silva GG, Aguinaldo K, Dinsdale EA, Haas AF, Hatay M, Sanchez SE, Wegley-Kelly L, Dutilh BE, Harkins TT, Lee CC, Tom W, Sandin SA, Smith JE, Zgliczynski B, Vermeij MJ, Rohwer F, Edwards RA.

PeerJ. 2014 Aug 19;2:e520. doi: 10.7717/peerj.520. eCollection 2014.

15.

Fishing drives declines in fish parasite diversity and has variable effects on parasite abundance.

Wood CL, Sandin SA, Zgliczynski B, Guerra AS, Micheli F.

Ecology. 2014 Jul;95(7):1929-46.

PMID:
25163125
16.

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

Kelly LW, Williams GJ, Barott KL, Carlson CA, Dinsdale EA, Edwards RA, Haas AF, Haynes M, Lim YW, McDole T, Nelson CE, Sala E, Sandin SA, Smith JE, Vermeij MJ, Youle M, Rohwer F.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10227-32. doi: 10.1073/pnas.1403319111. Epub 2014 Jun 30.

17.

Large birth size does not reduce negative latent effects of harsh environments across life stages in two coral species.

Hartmann AC, Marhaver KL, Chamberland VF, Sandin SA, Vermeij MJ.

Ecology. 2013 Sep;94(9):1966-76.

PMID:
24279268
18.

Global assessment of the status of coral reef herbivorous fishes: evidence for fishing effects.

Edwards CB, Friedlander AM, Green AG, Hardt MJ, Sala E, Sweatman HP, Williams ID, Zgliczynski B, Sandin SA, Smith JE.

Proc Biol Sci. 2013 Nov 20;281(1774):20131835. doi: 10.1098/rspb.2013.1835. Print 2014 Jan 7.

19.

Benthic communities at two remote Pacific coral reefs: effects of reef habitat, depth, and wave energy gradients on spatial patterns.

Williams GJ, Smith JE, Conklin EJ, Gove JM, Sala E, Sandin SA.

PeerJ. 2013 May 28;1:e81. doi: 10.7717/peerj.81. Print 2013.

20.

Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

Gove JM, Williams GJ, McManus MA, Heron SF, Sandin SA, Vetter OJ, Foley DG.

PLoS One. 2013 Apr 18;8(4):e61974. doi: 10.1371/journal.pone.0061974. Print 2013.

21.

Janzen-Connell effects in a broadcast-spawning Caribbean coral: distance-dependent survival of larvae and settlers.

Marhaver KL, Vermeij MJ, Rohwer F, Sandin SA.

Ecology. 2013 Jan;94(1):146-60.

PMID:
23600249
22.

Assessing coral reefs on a Pacific-wide scale using the microbialization score.

McDole T, Nulton J, Barott KL, Felts B, Hand C, Hatay M, Lee H, Nadon MO, Nosrat B, Salamon P, Bailey B, Sandin SA, Vargas-Angel B, Youle M, Zgliczynski BJ, Brainard RE, Rohwer F.

PLoS One. 2012;7(9):e43233. doi: 10.1371/journal.pone.0043233. Epub 2012 Sep 7.

23.

Fishing top predators indirectly affects condition and reproduction in a reef-fish community.

Walsh SM, Hamilton SL, Ruttenberg BI, Donovan MK, Sandin SA.

J Fish Biol. 2012 Mar;80(3):519-37. doi: 10.1111/j.1095-8649.2011.03209.x. Epub 2012 Jan 19.

PMID:
22380551
24.

Spatial dynamics of benthic competition on coral reefs.

Sandin SA, McNamara DE.

Oecologia. 2012 Apr;168(4):1079-90. doi: 10.1007/s00442-011-2156-0. Epub 2011 Oct 19.

PMID:
22009340
25.

Black reefs: iron-induced phase shifts on coral reefs.

Kelly LW, Barott KL, Dinsdale E, Friedlander AM, Nosrat B, Obura D, Sala E, Sandin SA, Smith JE, Vermeij MJ, Williams GJ, Willner D, Rohwer F.

ISME J. 2012 Mar;6(3):638-49. doi: 10.1038/ismej.2011.114. Epub 2011 Sep 1. Erratum in: ISME J. 2012 Mar;6(3):708.

26.

Trophic downgrading of planet Earth.

Estes JA, Terborgh J, Brashares JS, Power ME, Berger J, Bond WJ, Carpenter SR, Essington TE, Holt RD, Jackson JB, Marquis RJ, Oksanen L, Oksanen T, Paine RT, Pikitch EK, Ripple WJ, Sandin SA, Scheffer M, Schoener TW, Shurin JB, Sinclair AR, Soulé ME, Virtanen R, Wardle DA.

Science. 2011 Jul 15;333(6040):301-6. doi: 10.1126/science.1205106. Review.

PMID:
21764740
27.

Predator-induced demographic shifts in coral reef fish assemblages.

Ruttenberg BI, Hamilton SL, Walsh SM, Donovan MK, Friedlander A, DeMartini E, Sala E, Sandin SA.

PLoS One. 2011;6(6):e21062. doi: 10.1371/journal.pone.0021062. Epub 2011 Jun 16.

28.

Global human footprint on the linkage between biodiversity and ecosystem functioning in reef fishes.

Mora C, Aburto-Oropeza O, Ayala Bocos A, Ayotte PM, Banks S, Bauman AG, Beger M, Bessudo S, Booth DJ, Brokovich E, Brooks A, Chabanet P, Cinner JE, Cortés J, Cruz-Motta JJ, Cupul Magaña A, Demartini EE, Edgar GJ, Feary DA, Ferse SC, Friedlander AM, Gaston KJ, Gough C, Graham NA, Green A, Guzman H, Hardt M, Kulbicki M, Letourneur Y, López Pérez A, Loreau M, Loya Y, Martinez C, Mascareñas-Osorio I, Morove T, Nadon MO, Nakamura Y, Paredes G, Polunin NV, Pratchett MS, Reyes Bonilla H, Rivera F, Sala E, Sandin SA, Soler G, Stuart-Smith R, Tessier E, Tittensor DP, Tupper M, Usseglio P, Vigliola L, Wantiez L, Williams I, Wilson SK, Zapata FA.

PLoS Biol. 2011 Apr;9(4):e1000606. doi: 10.1371/journal.pbio.1000606. Epub 2011 Apr 5.

29.

Synthesizing mechanisms of density dependence in reef fishes: behavior, habitat configuration, and observational scale.

White JW, Samhouri JF, Stier AC, Wormald CL, Hamilton SL, Sandin SA.

Ecology. 2010 Jul;91(7):1949-61.

PMID:
20715614
30.

The lagoon at Caroline/Millennium atoll, Republic of Kiribati: natural history of a nearly pristine ecosystem.

Barott KL, Caselle JE, Dinsdale EA, Friedlander AM, Maragos JE, Obura D, Rohwer FL, Sandin SA, Smith JE, Zgliczynski B.

PLoS One. 2010 Jun 3;5(6):e10950. doi: 10.1371/journal.pone.0010950.

31.

Abundance, diversity, and activity of microbial assemblages associated with coral reef fish guts and feces.

Smriga S, Sandin SA, Azam F.

FEMS Microbiol Ecol. 2010 Jul 1;73(1):31-42. doi: 10.1111/j.1574-6941.2010.00879.x. Epub 2010 Mar 30.

32.

Survival and settlement success of coral planulae: independent and synergistic effects of macroalgae and microbes.

Vermeij MJ, Smith JE, Smith CM, Vega Thurber R, Sandin SA.

Oecologia. 2009 Mar;159(2):325-36. doi: 10.1007/s00442-008-1223-7. Epub 2008 Dec 3.

PMID:
19050932
33.
34.

A cross-system synthesis of consumer and nutrient resource control on producer biomass.

Gruner DS, Smith JE, Seabloom EW, Sandin SA, Ngai JT, Hillebrand H, Harpole WS, Elser JJ, Cleland EE, Bracken ME, Borer ET, Bolker BM.

Ecol Lett. 2008 Jul;11(7):740-55. doi: 10.1111/j.1461-0248.2008.01192.x. Epub 2008 Apr 25. Review.

PMID:
18445030
35.

Why fishing magnifies fluctuations in fish abundance.

Anderson CN, Hsieh CH, Sandin SA, Hewitt R, Hollowed A, Beddington J, May RM, Sugihara G.

Nature. 2008 Apr 17;452(7189):835-9. doi: 10.1038/nature06851.

PMID:
18421346
36.

Microbial ecology of four coral atolls in the Northern Line Islands.

Dinsdale EA, Pantos O, Smriga S, Edwards RA, Angly F, Wegley L, Hatay M, Hall D, Brown E, Haynes M, Krause L, Sala E, Sandin SA, Thurber RV, Willis BL, Azam F, Knowlton N, Rohwer F.

PLoS One. 2008 Feb 27;3(2):e1584. doi: 10.1371/journal.pone.0001584.

37.

Baselines and degradation of coral reefs in the Northern Line Islands.

Sandin SA, Smith JE, Demartini EE, Dinsdale EA, Donner SD, Friedlander AM, Konotchick T, Malay M, Maragos JE, Obura D, Pantos O, Paulay G, Richie M, Rohwer F, Schroeder RE, Walsh S, Jackson JB, Knowlton N, Sala E.

PLoS One. 2008 Feb 27;3(2):e1548. doi: 10.1371/journal.pone.0001548.

38.

Indirect effects of algae on coral: algae-mediated, microbe-induced coral mortality.

Smith JE, Shaw M, Edwards RA, Obura D, Pantos O, Sala E, Sandin SA, Smriga S, Hatay M, Rohwer FL.

Ecol Lett. 2006 Jul;9(7):835-45.

PMID:
16796574
39.

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