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Coxiella burnetii Intratracheal Aerosol Infection Model in Mice, Guinea Pigs, and Nonhuman Primates.

Gregory AE, van Schaik EJ, Russell-Lodrigue KE, Fratzke AP, Samuel JE.

Infect Immun. 2019 Nov 18;87(12). pii: e00178-19. doi: 10.1128/IAI.00178-19. Print 2019 Dec.


Chemokine Receptor 7 Is Essential for Coxiella burnetii Whole-Cell Vaccine-Induced Cellular Immunity but Dispensable for Vaccine-Mediated Protective Immunity.

Chen C, van Schaik EJ, Gregory AE, Vigil A, Felgner PL, Hendrix LR, Faris R, Samuel JE.

J Infect Dis. 2019 Jul 19;220(4):624-634. doi: 10.1093/infdis/jiz146.


Quantitative Yeast Genetic Interaction Profiling of Bacterial Effector Proteins Uncovers a Role for the Human Retromer in Salmonella Infection.

Patrick KL, Wojcechowskyj JA, Bell SL, Riba MN, Jing T, Talmage S, Xu P, Cabello AL, Xu J, Shales M, Jimenez-Morales D, Ficht TA, de Figueiredo P, Samuel JE, Li P, Krogan NJ, Watson RO.

Cell Syst. 2018 Sep 26;7(3):323-338.e6. doi: 10.1016/j.cels.2018.06.010. Epub 2018 Aug 1.


Identification and characterization of arginine finger-like motifs, and endosome-lysosome basolateral sorting signals within the Coxiella burnetii type IV secreted effector protein CirA.

Weber MM, Faris R, van Schaik EJ, Samuel JE.

Microbes Infect. 2018 May;20(5):302-307. doi: 10.1016/j.micinf.2017.12.013. Epub 2018 Jan 10.


Use of Reverse Vaccinology in the Design and Construction of Nanoglycoconjugate Vaccines against Burkholderia pseudomallei.

Muruato LA, Tapia D, Hatcher CL, Kalita M, Brett PJ, Gregory AE, Samuel JE, Titball RW, Torres AG.

Clin Vaccine Immunol. 2017 Nov 6;24(11). pii: e00206-17. doi: 10.1128/CVI.00206-17. Print 2017 Nov.


Global Reprogramming of Host Kinase Signaling in Response to Fungal Infection.

Pandey A, Ding SL, Qin QM, Gupta R, Gomez G, Lin F, Feng X, Fachini da Costa L, Chaki SP, Katepalli M, Case ED, van Schaik EJ, Sidiq T, Khalaf O, Arenas A, Kobayashi KS, Samuel JE, Rivera GM, Alaniz RC, Sze SH, Qian X, Brown WJ, Rice-Ficht A, Russell WK, Ficht TA, de Figueiredo P.

Cell Host Microbe. 2017 May 10;21(5):637-649.e6. doi: 10.1016/j.chom.2017.04.008.


The SCID Mouse Model for Identifying Virulence Determinants in Coxiella burnetii.

van Schaik EJ, Case ED, Martinez E, Bonazzi M, Samuel JE.

Front Cell Infect Microbiol. 2017 Feb 3;7:25. doi: 10.3389/fcimb.2017.00025. eCollection 2017.


Identification of Coxiella burnetii CD8+ T-Cell Epitopes and Delivery by Attenuated Listeria monocytogenes as a Vaccine Vector in a C57BL/6 Mouse Model.

Xiong X, Jiao J, Gregory AE, Wang P, Bi Y, Wang X, Jiang Y, Wen B, Portnoy DA, Samuel JE, Chen C.

J Infect Dis. 2017 May 15;215(10):1580-1589. doi: 10.1093/infdis/jiw470.


The Type IV Secretion System Effector Protein CirA Stimulates the GTPase Activity of RhoA and Is Required for Virulence in a Mouse Model of Coxiella burnetii Infection.

Weber MM, Faris R, van Schaik EJ, McLachlan JT, Wright WU, Tellez A, Roman VA, Rowin K, Case ED, Luo ZQ, Samuel JE.

Infect Immun. 2016 Aug 19;84(9):2524-33. doi: 10.1128/IAI.01554-15. Print 2016 Sep.


Contrasting Lifestyles Within the Host Cell.

Case EDR, Samuel JE.

Microbiol Spectr. 2016 Feb;4(1). doi: 10.1128/microbiolspec.VMBF-0014-2015. Review.


Space: A Final Frontier for Vacuolar Pathogens.

Case ED, Smith JA, Ficht TA, Samuel JE, de Figueiredo P.

Traffic. 2016 May;17(5):461-74. doi: 10.1111/tra.12382. Epub 2016 Feb 24. Review.


Modulation of the host transcriptome by Coxiella burnetii nuclear effector Cbu1314.

Weber MM, Faris R, McLachlan J, Tellez A, Wright WU, Galvan G, Luo ZQ, Samuel JE.

Microbes Infect. 2016 May;18(5):336-45. doi: 10.1016/j.micinf.2016.01.003. Epub 2016 Jan 28.


Surfactant Protein D Binds to Coxiella burnetii and Results in a Decrease in Interactions with Murine Alveolar Macrophages.

Soltysiak KA, van Schaik EJ, Samuel JE.

PLoS One. 2015 Sep 14;10(9):e0136699. doi: 10.1371/journal.pone.0136699. eCollection 2015.


Cloning, expression, and characterization of a Coxiella burnetii Cu/Zn Superoxide dismutase.

Brennan RE, Kiss K, Baalman R, Samuel JE.

BMC Microbiol. 2015 May 12;15:99. doi: 10.1186/s12866-015-0430-8.


Tripping on acid: trans-kingdom perspectives on biological acids in immunity and pathogenesis.

Criscitiello MF, Dickman MB, Samuel JE, de Figueiredo P.

PLoS Pathog. 2013;9(7):e1003402. doi: 10.1371/journal.ppat.1003402. Epub 2013 Jul 18. Review. No abstract available.


Identification of Coxiella burnetii type IV secretion substrates required for intracellular replication and Coxiella-containing vacuole formation.

Weber MM, Chen C, Rowin K, Mertens K, Galvan G, Zhi H, Dealing CM, Roman VA, Banga S, Tan Y, Luo ZQ, Samuel JE.

J Bacteriol. 2013 Sep;195(17):3914-24.


Molecular pathogenesis of the obligate intracellular bacterium Coxiella burnetii.

van Schaik EJ, Chen C, Mertens K, Weber MM, Samuel JE.

Nat Rev Microbiol. 2013 Aug;11(8):561-73. doi: 10.1038/nrmicro3049. Epub 2013 Jun 24. Review.


When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii.

Pearson T, Hornstra HM, Sahl JW, Schaack S, Schupp JM, Beckstrom-Sternberg SM, O'Neill MW, Priestley RA, Champion MD, Beckstrom-Sternberg JS, Kersh GJ, Samuel JE, Massung RF, Keim P.

Syst Biol. 2013 Sep;62(5):752-62. doi: 10.1093/sysbio/syt038. Epub 2013 Jun 4.


Components of protective immunity.

Zhang G, Zhang Y, Samuel JE.

Adv Exp Med Biol. 2012;984:91-104. doi: 10.1007/978-94-007-4315-1_5. Review.


Defense mechanisms against oxidative stress in Coxiella burnetii: adaptation to a unique intracellular niche.

Mertens K, Samuel JE.

Adv Exp Med Biol. 2012;984:39-63. doi: 10.1007/978-94-007-4315-1_3. Review.


Phylogenetic diversity, virulence and comparative genomics.

van Schaik EJ, Samuel JE.

Adv Exp Med Biol. 2012;984:13-38. doi: 10.1007/978-94-007-4315-1_2. Review.


Coxiella burnetii induces apoptosis during early stage infection via a caspase-independent pathway in human monocytic THP-1 cells.

Zhang Y, Zhang G, Hendrix LR, Tesh VL, Samuel JE.

PLoS One. 2012;7(1):e30841. doi: 10.1371/journal.pone.0030841. Epub 2012 Jan 27.


Rapid typing of Coxiella burnetii.

Hornstra HM, Priestley RA, Georgia SM, Kachur S, Birdsell DN, Hilsabeck R, Gates LT, Samuel JE, Heinzen RA, Kersh GJ, Keim P, Massung RF, Pearson T.

PLoS One. 2011;6(11):e26201. doi: 10.1371/journal.pone.0026201. Epub 2011 Nov 2.


Characterization of the GDP-D-mannose biosynthesis pathway in Coxiella burnetii: the initial steps for GDP-β-D-virenose biosynthesis.

Narasaki CT, Mertens K, Samuel JE.

PLoS One. 2011;6(10):e25514. doi: 10.1371/journal.pone.0025514. Epub 2011 Oct 31.


Profiling the humoral immune response of acute and chronic Q fever by protein microarray.

Vigil A, Chen C, Jain A, Nakajima-Sasaki R, Jasinskas A, Pablo J, Hendrix LR, Samuel JE, Felgner PL.

Mol Cell Proteomics. 2011 Oct;10(10):M110.006304. doi: 10.1074/mcp.M110.006304. Epub 2011 Aug 4.


Isolation from animal tissue and genetic transformation of Coxiella burnetii are facilitated by an improved axenic growth medium.

Omsland A, Beare PA, Hill J, Cockrell DC, Howe D, Hansen B, Samuel JE, Heinzen RA.

Appl Environ Microbiol. 2011 Jun;77(11):3720-5. doi: 10.1128/AEM.02826-10. Epub 2011 Apr 8.


Identification of CD4+ T cell epitopes in C. burnetii antigens targeted by antibody responses.

Chen C, Dow C, Wang P, Sidney J, Read A, Harmsen A, Samuel JE, Peters B.

PLoS One. 2011 Mar 15;6(3):e17712. doi: 10.1371/journal.pone.0017712.


Large-scale identification and translocation of type IV secretion substrates by Coxiella burnetii.

Chen C, Banga S, Mertens K, Weber MM, Gorbaslieva I, Tan Y, Luo ZQ, Samuel JE.

Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21755-60. doi: 10.1073/pnas.1010485107. Epub 2010 Nov 23.


Coxiella burnetii acid phosphatase inhibits the release of reactive oxygen intermediates in polymorphonuclear leukocytes.

Hill J, Samuel JE.

Infect Immun. 2011 Jan;79(1):414-20. doi: 10.1128/IAI.01011-10. Epub 2010 Nov 15.


Immunoreactive Coxiella burnetii Nine Mile proteins separated by 2D electrophoresis and identified by tandem mass spectrometry.

Deringer JR, Chen C, Samuel JE, Brown WC.

Microbiology. 2011 Feb;157(Pt 2):526-42. doi: 10.1099/mic.0.043513-0. Epub 2010 Oct 28.


Laboratory maintenance of Coxiella burnetii.

Samuel JE, Hendrix LR.

Curr Protoc Microbiol. 2009 Nov;Chapter 6:Unit 6C.1. doi: 10.1002/9780471729259.mc06c01s15.


Coxiella burnetii isolates cause genogroup-specific virulence in mouse and guinea pig models of acute Q fever.

Russell-Lodrigue KE, Andoh M, Poels MW, Shive HR, Weeks BR, Zhang GQ, Tersteeg C, Masegi T, Hotta A, Yamaguchi T, Fukushi H, Hirai K, McMurray DN, Samuel JE.

Infect Immun. 2009 Dec;77(12):5640-50. doi: 10.1128/IAI.00851-09. Epub 2009 Sep 28.


Rickettsiology and Rickettsial Diseases--Fifth International Conference. Foreword.

Hechemy KE, Brouqui P, Samuel JE, Raoult DA.

Ann N Y Acad Sci. 2009 May;1166:vii-viii. doi: 10.1111/j.1749-6632.2009.04532.x. No abstract available.


The Coxiella burnetii ankyrin repeat domain-containing protein family is heterogeneous, with C-terminal truncations that influence Dot/Icm-mediated secretion.

Voth DE, Howe D, Beare PA, Vogel JP, Unsworth N, Samuel JE, Heinzen RA.

J Bacteriol. 2009 Jul;191(13):4232-42. doi: 10.1128/JB.01656-08. Epub 2009 May 1.


A systematic approach to evaluate humoral and cellular immune responses to Coxiella burnetii immunoreactive antigens.

Chen C, Bouman TJ, Beare PA, Mertens K, Zhang GQ, Russell-Lodrigue KE, Hogaboam JP, Peters B, Felgner PL, Brown WC, Heinzen RA, Hendrix LR, Samuel JE.

Clin Microbiol Infect. 2009 Dec;15 Suppl 2:156-7. doi: 10.1111/j.1469-0691.2008.02206.x. Epub 2009 Mar 11. No abstract available.


Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella.

Beare PA, Unsworth N, Andoh M, Voth DE, Omsland A, Gilk SD, Williams KP, Sobral BW, Kupko JJ 3rd, Porcella SF, Samuel JE, Heinzen RA.

Infect Immun. 2009 Feb;77(2):642-56. doi: 10.1128/IAI.01141-08. Epub 2008 Dec 1.


Candidate antigens for Q fever serodiagnosis revealed by immunoscreening of a Coxiella burnetii protein microarray.

Beare PA, Chen C, Bouman T, Pablo J, Unal B, Cockrell DC, Brown WC, Barbian KD, Porcella SF, Samuel JE, Felgner PL, Heinzen RA.

Clin Vaccine Immunol. 2008 Dec;15(12):1771-9. doi: 10.1128/CVI.00300-08. Epub 2008 Oct 8.


Detection of tick-borne pathogens by MassTag polymerase chain reaction.

Tokarz R, Kapoor V, Samuel JE, Bouyer DH, Briese T, Lipkin WI.

Vector Borne Zoonotic Dis. 2009 Apr;9(2):147-52. doi: 10.1089/vbz.2008.0088.


Constitutive SOS expression and damage-inducible AddAB-mediated recombinational repair systems for Coxiella burnetii as potential adaptations for survival within macrophages.

Mertens K, Lantsheer L, Ennis DG, Samuel JE.

Mol Microbiol. 2008 Sep;69(6):1411-26. doi: 10.1111/j.1365-2958.2008.06373.x. Epub 2008 Jul 18.


Limited role for iron regulation in Coxiella burnetii pathogenesis.

Briggs HL, Pul N, Seshadri R, Wilson MJ, Tersteeg C, Russell-Lodrigue KE, Andoh M, Bäumler AJ, Samuel JE.

Infect Immun. 2008 May;76(5):2189-201. doi: 10.1128/IAI.01609-07. Epub 2008 Mar 3.


Mechanisms of vaccine-induced protective immunity against Coxiella burnetii infection in BALB/c mice.

Zhang G, Russell-Lodrigue KE, Andoh M, Zhang Y, Hendrix LR, Samuel JE.

J Immunol. 2007 Dec 15;179(12):8372-80.


Clock drawing and frontal lobe behavioral effects of memantine in Alzheimer's disease: a rater-blinded study.

Paskavitz JF, Gunstad JJ, Samuel JE.

Am J Alzheimers Dis Other Demen. 2006 Dec-2007 Jan;21(6):454-9.


Proteome and antigen profiling of Coxiella burnetii developmental forms.

Coleman SA, Fischer ER, Cockrell DC, Voth DE, Howe D, Mead DJ, Samuel JE, Heinzen RA.

Infect Immun. 2007 Jan;75(1):290-8. Epub 2006 Nov 6.


Clinical and pathologic changes in a guinea pig aerosol challenge model of acute Q fever.

Russell-Lodrigue KE, Zhang GQ, McMurray DN, Samuel JE.

Infect Immun. 2006 Nov;74(11):6085-91.


Genetic diversity of the Q fever agent, Coxiella burnetii, assessed by microarray-based whole-genome comparisons.

Beare PA, Samuel JE, Howe D, Virtaneva K, Porcella SF, Heinzen RA.

J Bacteriol. 2006 Apr;188(7):2309-24.


Hepatitis associated with C. burnetii isolates.

Russell-Lodrigue KE, Poels MW, Zhang GQ, McMurray DN, Samuel JE.

Ann N Y Acad Sci. 2005 Dec;1063:176-80. No abstract available.


Comparative virulence of phase I and II Coxiella burnetii in immunodeficient mice.

Andoh M, Russell-Lodrigue KE, Zhang G, Samuel JE.

Ann N Y Acad Sci. 2005 Dec;1063:167-70.


A minimal set of DNA repair genes is sufficient for survival of Coxiella burnetii under oxidative stress.

Mertens K, Lantsheer L, Samuel JE.

Ann N Y Acad Sci. 2005 Dec;1063:73-5.


Fur-regulated genes in Coxiella burnetii.

Briggs HL, Wilson MJ, Seshadri R, Samuel JE.

Ann N Y Acad Sci. 2005 Dec;1063:68-72.


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