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Items: 17

1.

Multiscale Modeling and Simulation Approaches to Lipid-Protein Interactions.

Huber RG, Carpenter TS, Dube N, Holdbrook DA, Ingólfsson HI, Irvine WA, Marzinek JK, Samsudin F, Allison JR, Khalid S, Bond PJ.

Methods Mol Biol. 2019;2003:1-30. doi: 10.1007/978-1-4939-9512-7_1.

PMID:
31218611
2.
3.

Movement of Arginine through OprD: The Energetics of Permeation and the Role of Lipopolysaccharide in Directing Arginine to the Protein.

Samsudin F, Khalid S.

J Phys Chem B. 2019 Apr 4;123(13):2824-2832. doi: 10.1021/acs.jpcb.9b00063. Epub 2019 Mar 19.

PMID:
30839215
4.

Binding from Both Sides: TolR and Full-Length OmpA Bind and Maintain the Local Structure of the E. coli Cell Wall.

Boags AT, Samsudin F, Khalid S.

Structure. 2019 Apr 2;27(4):713-724.e2. doi: 10.1016/j.str.2019.01.001. Epub 2019 Jan 31.

PMID:
30713026
5.

Atomistic and Coarse Grain Simulations of the Cell Envelope of Gram-Negative Bacteria: What Have We Learned?

Khalid S, Piggot TJ, Samsudin F.

Acc Chem Res. 2019 Jan 15;52(1):180-188. doi: 10.1021/acs.accounts.8b00377. Epub 2018 Dec 18.

PMID:
30562009
6.

Protein assemblies ejected directly from native membranes yield complexes for mass spectrometry.

Chorev DS, Baker LA, Wu D, Beilsten-Edmands V, Rouse SL, Zeev-Ben-Mordehai T, Jiko C, Samsudin F, Gerle C, Khalid S, Stewart AG, Matthews SJ, Grünewald K, Robinson CV.

Science. 2018 Nov 16;362(6416):829-834. doi: 10.1126/science.aau0976. Erratum in: Science. 2019 Apr 26;364(6438):.

7.

Correction to "Directional Porin Binding of Intrinsically Disordered Protein Sequences Promotes Colicin Epitope Display in the Bacterial Periplasm".

Housden NG, Rassam P, Lee S, Samsudin F, Kaminska R, Sharp C, Goult JD, Francis ML, Khalid S, Bayley H, Kleanthous C.

Biochemistry. 2018 Sep 4;57(35):5270. doi: 10.1021/acs.biochem.8b00864. Epub 2018 Aug 23. No abstract available.

8.

The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerization.

Punekar AS, Samsudin F, Lloyd AJ, Dowson CG, Scott DJ, Khalid S, Roper DI.

Cell Surf. 2018 Jun;2:54-66. doi: 10.1016/j.tcsw.2018.06.002.

9.

Directional Porin Binding of Intrinsically Disordered Protein Sequences Promotes Colicin Epitope Display in the Bacterial Periplasm.

Housden NG, Rassam P, Lee S, Samsudin F, Kaminska R, Sharp C, Goult JD, Francis ML, Khalid S, Bayley H, Kleanthous C.

Biochemistry. 2018 Jul 24;57(29):4374-4381. doi: 10.1021/acs.biochem.8b00621. Epub 2018 Jul 6. Erratum in: Biochemistry. 2018 Sep 4;57(35):5270.

10.

It Is Complicated: Curvature, Diffusion, and Lipid Sorting within the Two Membranes of Escherichia coli.

Hsu PC, Samsudin F, Shearer J, Khalid S.

J Phys Chem Lett. 2017 Nov 16;8(22):5513-5518. doi: 10.1021/acs.jpclett.7b02432. Epub 2017 Oct 31.

PMID:
29053278
11.

Braun's Lipoprotein Facilitates OmpA Interaction with the Escherichia coli Cell Wall.

Samsudin F, Boags A, Piggot TJ, Khalid S.

Biophys J. 2017 Oct 3;113(7):1496-1504. doi: 10.1016/j.bpj.2017.08.011.

12.

Progress in Molecular Dynamics Simulations of Gram-Negative Bacterial Cell Envelopes.

Boags A, Hsu PC, Samsudin F, Bond PJ, Khalid S.

J Phys Chem Lett. 2017 Jun 1;8(11):2513-2518. doi: 10.1021/acs.jpclett.7b00473. Epub 2017 May 22.

PMID:
28467715
13.

OmpA: A Flexible Clamp for Bacterial Cell Wall Attachment.

Samsudin F, Ortiz-Suarez ML, Piggot TJ, Bond PJ, Khalid S.

Structure. 2016 Dec 6;24(12):2227-2235. doi: 10.1016/j.str.2016.10.009. Epub 2016 Nov 17.

14.

Full-Length OmpA: Structure, Function, and Membrane Interactions Predicted by Molecular Dynamics Simulations.

Ortiz-Suarez ML, Samsudin F, Piggot TJ, Bond PJ, Khalid S.

Biophys J. 2016 Oct 18;111(8):1692-1702. doi: 10.1016/j.bpj.2016.09.009.

15.

Non-thermal plasma for air and water remediation.

Hashim SA, Samsudin FN, Wong CS, Abu Bakar K, Yap SL, Mohd Zin MF.

Arch Biochem Biophys. 2016 Sep 1;605:34-40. doi: 10.1016/j.abb.2016.03.032. Epub 2016 Apr 4.

PMID:
27056469
16.

Accurate Prediction of Ligand Affinities for a Proton-Dependent Oligopeptide Transporter.

Samsudin F, Parker JL, Sansom MSP, Newstead S, Fowler PW.

Cell Chem Biol. 2016 Feb 18;23(2):299-309. doi: 10.1016/j.chembiol.2015.11.015. Epub 2016 Jan 28.

17.

Crystal Structures of the Extracellular Domain from PepT1 and PepT2 Provide Novel Insights into Mammalian Peptide Transport.

Beale JH, Parker JL, Samsudin F, Barrett AL, Senan A, Bird LE, Scott D, Owens RJ, Sansom MSP, Tucker SJ, Meredith D, Fowler PW, Newstead S.

Structure. 2015 Oct 6;23(10):1889-1899. doi: 10.1016/j.str.2015.07.016. Epub 2015 Aug 27.

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