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Items: 1 to 50 of 81

1.

Thorough analysis of a rapid spread tuberculosis outbreak by epidemiological and whole-genome sequencing.

Comin J, Chaure A, Cebollada A, Ibarz D, Viñuelas J, Vitoria MA, Iglesias MJ, Samper S.

Infect Genet Evol. 2020 Jan 10:104184. doi: 10.1016/j.meegid.2020.104184. [Epub ahead of print]

PMID:
31931260
2.

Antimicrobial Susceptibilities and Phylogenetic Analyses of Enterococcus hirae Isolated from Broilers with Valvular Endocarditis.

Moreno B, Bolea R, Andrés-Lasheras S, Sevilla E, Samper S, Morales M, Vargas A, Chirino-Trejo M, Badiola JJ.

Avian Dis. 2019 Jun 1;63(2):318-324. doi: 10.1637/11986-102418-Reg.1.

PMID:
31251533
3.

A Mycobacterium tuberculosis Beijing strain persists at high rates and extends its geographic boundaries 20 years after importation.

Pérez-Lago L, Campos-Herrero MI, Cañas F, Copado R, Sante L, Pino B, Lecuona M, Gil ÓD, Martín C, Muñoz P, García-de-Viedma D, Samper S.

Sci Rep. 2019 Mar 18;9(1):4687. doi: 10.1038/s41598-019-40525-6.

4.

New insights into the transposition mechanisms of IS6110 and its dynamic distribution between Mycobacterium tuberculosis Complex lineages.

Gonzalo-Asensio J, Pérez I, Aguiló N, Uranga S, Picó A, Lampreave C, Cebollada A, Otal I, Samper S, Martín C.

PLoS Genet. 2018 Apr 12;14(4):e1007282. doi: 10.1371/journal.pgen.1007282. eCollection 2018 Apr.

5.

Data-driven model for the assessment of Mycobacterium tuberculosis transmission in evolving demographic structures.

Arregui S, Iglesias MJ, Samper S, Marinova D, Martin C, Sanz J, Moreno Y.

Proc Natl Acad Sci U S A. 2018 Apr 3;115(14):E3238-E3245. doi: 10.1073/pnas.1720606115. Epub 2018 Mar 21.

6.

Microbiological diagnosis of infections caused by the genus Mycobacterium.

Samper S, González-Martin J.

Enferm Infecc Microbiol Clin. 2018 Feb;36(2):104-111. doi: 10.1016/j.eimc.2017.11.009. Epub 2017 Dec 26. English, Spanish.

PMID:
29287920
7.

Antimicrobial photodynamic activity of Rose Bengal, alone or in combination with Gentamicin, against planktonic and biofilm Staphylococcus aureus.

Pérez-Laguna V, García-Luque I, Ballesta S, Pérez-Artiaga L, Lampaya-Pérez V, Samper S, Soria-Lozano P, Rezusta A, Gilaberte Y.

Photodiagnosis Photodyn Ther. 2018 Mar;21:211-216. doi: 10.1016/j.pdpdt.2017.11.012. Epub 2017 Nov 28.

PMID:
29196246
8.

Mycobacterium tuberculosis genotypes and predominant clones among the multidrug-resistant isolates in Spain 1998-2005.

Samper S, Gavín P, Millán-Lou MI, Iglesias MJ, Jiménez MS; Spanish Working Group on MDR-TB, Couvin D, Rastogi N.

Infect Genet Evol. 2017 Nov;55:117-126. doi: 10.1016/j.meegid.2017.08.003. Epub 2017 Aug 5.

PMID:
28789982
9.

PyroTyping, a novel pyrosequencing-based assay for Mycobacterium tuberculosis genotyping.

Molina-Moya B, Lacoma A, García-Sierra N, Blanco S, Haba L, Samper S, Ruiz-Manzano J, Prat C, Arnold C, Domínguez J.

Sci Rep. 2017 Jul 28;7(1):6777. doi: 10.1038/s41598-017-06760-5.

10.

Molecular Characterization of Mycobacterium tuberculosis Strains with TB-SPRINT.

Molina-Moya B, Gomgnimbou MK, Lafoz C, Lacoma A, Prat C, Refrégier G, Samper S, Dominguez J, Sola C.

Am J Trop Med Hyg. 2017 Sep;97(3):806-809. doi: 10.4269/ajtmh.16-0782. Epub 2017 Jul 19.

11.

Rapid diagnosis of tuberculosis. Detection of drug resistance mechanisms.

Viñuelas-Bayón J, Vitoria MA, Samper S.

Enferm Infecc Microbiol Clin. 2017 Oct;35(8):520-528. doi: 10.1016/j.eimc.2017.01.015. Epub 2017 Mar 15. Review. English, Spanish.

PMID:
28318570
12.

In-depth analysis of the genome sequence of a clinical, extensively drug-resistant Mycobacterium bovis strain.

Sagasti S, Millán-Lou MI, Soledad Jiménez M, Martín C, Samper S.

Tuberculosis (Edinb). 2016 Sep;100:46-52. doi: 10.1016/j.tube.2016.06.005. Epub 2016 Jun 29.

PMID:
27553409
13.

Correction for Molina-Moya et al., Evaluation of GenoFlow DR-MTB Array Test for Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis.

Molina-Moya B, Kazdaglis G, Lacoma A, Prat C, Gómez A, Villar-Hernández R, García-García E, Haba L, Maldonado J, Samper S, Ruiz-Manzano J, Domínguez J.

J Clin Microbiol. 2016 Aug;54(8):2211. doi: 10.1128/JCM.01181-16. No abstract available.

14.

Peritoneal tuberculosis due to Mycobacterium caprae.

Nebreda T, Álvarez-Prida E, Blanco B, Remacha MA, Samper S, Jiménez MS.

IDCases. 2016 Apr 5;4:50-2. doi: 10.1016/j.idcr.2016.02.010. eCollection 2016.

15.

Evaluation of GenoFlow DR-MTB Array Test for Detection of Rifampin and Isoniazid Resistance in Mycobacterium tuberculosis.

Molina-Moya B, Kazdaglis G, Lacoma A, Prat C, Gómez A, Villar-Hernández R, García-García E, Haba L, Maldonado J, Samper S, Ruiz-Manzano J, Domínguez J.

J Clin Microbiol. 2016 Apr;54(4):1160-3. doi: 10.1128/JCM.03341-15. Epub 2016 Feb 10. Erratum in: J Clin Microbiol. 2016 Aug;54(8):2211.

16.

Mycobacterial diversity causing multi- and extensively drug-resistant tuberculosis in Djibouti, Horn of Africa.

Millán-Lou MI, Ollé-Goig JE, Tortola MT, Martin C, Samper S.

Int J Tuberc Lung Dis. 2016 Feb;20(2):150-3. doi: 10.5588/ijtld.15.0268.

PMID:
26792464
17.

Pyrosequencing for rapid detection of Mycobacterium tuberculosis second-line drugs and ethambutol resistance.

Lacoma A, Molina-Moya B, Prat C, Pimkina E, Diaz J, Dudnyk A, García-Sierra N, Haba L, Maldonado J, Samper S, Ruiz-Manzano J, Ausina V, Dominguez J.

Diagn Microbiol Infect Dis. 2015 Nov;83(3):263-9. doi: 10.1016/j.diagmicrobio.2015.07.004. Epub 2015 Jul 11.

PMID:
26256417
18.

In Vivo IS6110 Profile Changes in a Mycobacterium tuberculosis Strain as Determined by Tracking over 14 Years.

Millán-Lou MI, Otal I, Monforte ML, Vitoria MA, Revillo MJ, Martín C, Samper S.

J Clin Microbiol. 2015 Jul;53(7):2359-61. doi: 10.1128/JCM.00607-15. Epub 2015 May 6.

19.

Diagnostic accuracy study of multiplex PCR for detecting tuberculosis drug resistance.

Molina-Moya B, Lacoma A, Prat C, Pimkina E, Diaz J, García-Sierra N, Haba L, Maldonado J, Samper S, Ruiz-Manzano J, Ausina V, Dominguez J.

J Infect. 2015 Aug;71(2):220-30. doi: 10.1016/j.jinf.2015.03.011. Epub 2015 Apr 30.

PMID:
25936742
20.

Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage.

Merker M, Blin C, Mona S, Duforet-Frebourg N, Lecher S, Willery E, Blum MG, Rüsch-Gerdes S, Mokrousov I, Aleksic E, Allix-Béguec C, Antierens A, Augustynowicz-Kopeć E, Ballif M, Barletta F, Beck HP, Barry CE 3rd, Bonnet M, Borroni E, Campos-Herrero I, Cirillo D, Cox H, Crowe S, Crudu V, Diel R, Drobniewski F, Fauville-Dufaux M, Gagneux S, Ghebremichael S, Hanekom M, Hoffner S, Jiao WW, Kalon S, Kohl TA, Kontsevaya I, Lillebæk T, Maeda S, Nikolayevskyy V, Rasmussen M, Rastogi N, Samper S, Sanchez-Padilla E, Savic B, Shamputa IC, Shen A, Sng LH, Stakenas P, Toit K, Varaine F, Vukovic D, Wahl C, Warren R, Supply P, Niemann S, Wirth T.

Nat Genet. 2015 Mar;47(3):242-9. doi: 10.1038/ng.3195. Epub 2015 Jan 19.

PMID:
25599400
21.

AID TB resistance line probe assay for rapid detection of resistant Mycobacterium tuberculosis in clinical samples.

Molina-Moya B, Lacoma A, Prat C, Diaz J, Dudnyk A, Haba L, Maldonado J, Samper S, Ruiz-Manzano J, Ausina V, Dominguez J.

J Infect. 2015 Apr;70(4):400-8. doi: 10.1016/j.jinf.2014.09.010. Epub 2014 Oct 12.

PMID:
25305498
22.

Role of wild bird and rodents in the epidemiology of subclinical salmonellosis in finishing pigs.

Andrés-Barranco S, Vico JP, Garrido V, Samper S, Herrera-León S, de Frutos C, Mainar-Jaime RC.

Foodborne Pathog Dis. 2014 Sep;11(9):689-97. doi: 10.1089/fpd.2014.1755. Epub 2014 Jun 13.

PMID:
24927384
23.

A specific polymorphism in Mycobacterium tuberculosis H37Rv causes differential ESAT-6 expression and identifies WhiB6 as a novel ESX-1 component.

Solans L, Aguiló N, Samper S, Pawlik A, Frigui W, Martín C, Brosch R, Gonzalo-Asensio J.

Infect Immun. 2014 Aug;82(8):3446-56. doi: 10.1128/IAI.01824-14. Epub 2014 Jun 2.

24.

Single nucleotide polymorphism (SNP) analysis used for the phylogeny of the Mycobacterium tuberculosis complex based on a pyrosequencing assay.

Cabal A, Strunk M, Domínguez J, Lezcano MA, Vitoria MA, Ferrero M, Martín C, Iglesias MJ, Samper S.

BMC Microbiol. 2014 Feb 3;14:21. doi: 10.1186/1471-2180-14-21.

25.

Proposal of a consensus set of hypervariable mycobacterial interspersed repetitive-unit-variable-number tandem-repeat loci for subtyping of Mycobacterium tuberculosis Beijing isolates.

Allix-Béguec C, Wahl C, Hanekom M, Nikolayevskyy V, Drobniewski F, Maeda S, Campos-Herrero I, Mokrousov I, Niemann S, Kontsevaya I, Rastogi N, Samper S, Sng LH, Warren RM, Supply P.

J Clin Microbiol. 2014 Jan;52(1):164-72. doi: 10.1128/JCM.02519-13. Epub 2013 Oct 30.

26.

Global study of IS6110 in a successful Mycobacterium tuberculosis strain: clues for deciphering its behavior and for its rapid detection.

Millán-Lou MI, López-Calleja AI, Colmenarejo C, Lezcano MA, Vitoria MA, del Portillo P, Otal I, Martín C, Samper S.

J Clin Microbiol. 2013 Nov;51(11):3631-7. doi: 10.1128/JCM.00970-13. Epub 2013 Aug 28.

27.

Mapping IS6110 in high-copy number Mycobacterium tuberculosis strains shows specific insertion points in the Beijing genotype.

Alonso H, Samper S, Martín C, Otal I.

BMC Genomics. 2013 Jun 25;14:422. doi: 10.1186/1471-2164-14-422.

28.

Analysis of mutations in streptomycin-resistant strains reveals a simple and reliable genetic marker for identification of the Mycobacterium tuberculosis Beijing genotype.

Villellas C, Aristimuño L, Vitoria MA, Prat C, Blanco S, García de Viedma D, Domínguez J, Samper S, Aínsa JA.

J Clin Microbiol. 2013 Jul;51(7):2124-30. doi: 10.1128/JCM.01944-12. Epub 2013 Apr 24.

29.

Mycobacterium simiae pulmonary infection unmasked during immune reconstitution in an HIV patient.

Vitoria MA, González-Domínguez M, Salvo S, Crusells MJ, Letona S, Samper S, Sanjoaquín I.

Diagn Microbiol Infect Dis. 2013 Jan;75(1):101-3. doi: 10.1016/j.diagmicrobio.2012.09.004. Epub 2012 Oct 4.

PMID:
23040511
30.

Epidemiology of subclinical salmonellosis in wild birds from an area of high prevalence of pig salmonellosis: phenotypic and genetic profiles of Salmonella isolates.

Andrés S, Vico JP, Garrido V, Grilló MJ, Samper S, Gavín P, Herrera-León S, Mainar-Jaime RC.

Zoonoses Public Health. 2013 Aug;60(5):355-65. doi: 10.1111/j.1863-2378.2012.01542.x. Epub 2012 Aug 22.

PMID:
22909058
31.

IS-seq: a novel high throughput survey of in vivo IS6110 transposition in multiple Mycobacterium tuberculosis genomes.

Reyes A, Sandoval A, Cubillos-Ruiz A, Varley KE, Hernández-Neuta I, Samper S, Martín C, García MJ, Ritacco V, López L, Robledo J, Zambrano MM, Mitra RD, Del Portillo P.

BMC Genomics. 2012 Jun 15;13:249. doi: 10.1186/1471-2164-13-249.

32.

Low dose aerosol fitness at the innate phase of murine infection better predicts virulence amongst clinical strains of Mycobacterium tuberculosis.

Caceres N, Llopis I, Marzo E, Prats C, Vilaplana C, García de Viedma D, Samper S, Lopez D, Cardona PJ.

PLoS One. 2012;7(1):e29010. doi: 10.1371/journal.pone.0029010. Epub 2012 Jan 3. Erratum in: PLoS One. 2019 Sep 17;14(9):e0222794.

33.

Rapid test for identification of a highly transmissible Mycobacterium tuberculosis Beijing strain of sub-Saharan origin.

Millán-Lou MI, Alonso H, Gavín P, Hernández-Febles M, Campos-Herrero MI, Copado R, Cañas F, Kremer K, Caminero JA, Martín C, Samper S.

J Clin Microbiol. 2012 Feb;50(2):516-8. doi: 10.1128/JCM.06314-11. Epub 2011 Nov 23.

34.

GenoType MTBDRsl for molecular detection of second-line-drug and ethambutol resistance in Mycobacterium tuberculosis strains and clinical samples.

Lacoma A, García-Sierra N, Prat C, Maldonado J, Ruiz-Manzano J, Haba L, Gavin P, Samper S, Ausina V, Domínguez J.

J Clin Microbiol. 2012 Jan;50(1):30-6. doi: 10.1128/JCM.05274-11. Epub 2011 Nov 9.

35.

Pyrosequencing for rapid molecular detection of rifampin and isoniazid resistance in Mycobacterium tuberculosis strains and clinical specimens.

García-Sierra N, Lacoma A, Prat C, Haba L, Maldonado J, Ruiz-Manzano J, Gavin P, Samper S, Ausina V, Domínguez J.

J Clin Microbiol. 2011 Oct;49(10):3683-6. doi: 10.1128/JCM.01239-11. Epub 2011 Aug 3.

36.

Conspicuous multidrug-resistant Mycobacterium tuberculosis cluster strains do not trespass country borders in Latin America and Spain.

Ritacco V, Iglesias MJ, Ferrazoli L, Monteserin J, Dalla Costa ER, Cebollada A, Morcillo N, Robledo J, de Waard JH, Araya P, Aristimuño L, Díaz R, Gavin P, Imperiale B, Simonsen V, Zapata EM, Jiménez MS, Rossetti ML, Martin C, Barrera L, Samper S.

Infect Genet Evol. 2012 Jun;12(4):711-7. doi: 10.1016/j.meegid.2011.06.006. Epub 2011 Jun 21.

PMID:
21718805
37.

Multi scale modal decomposition of primary form, waviness and roughness of surfaces.

Goic GL, Favrelière H, Samper S, Formosa F.

Scanning. 2011 Sep-Oct;33(5):332-41. doi: 10.1002/sca.20253. Epub 2011 Jun 21.

PMID:
21695704
38.

Long-term molecular surveillance of multidrug-resistant tuberculosis in Spain.

Gavín P, Iglesias MJ, Jiménez MS, Rodríguez-Valín E, Ibarz D, Lezcano MA, Revillo MJ, Martín C, Samper S; Spanish Working Group on MDR-TB.

Infect Genet Evol. 2012 Jun;12(4):701-10. doi: 10.1016/j.meegid.2011.05.016. Epub 2011 May 27.

PMID:
21669301
39.

Asia-Pacific Health 2020 and Genomics without Borders: Co-Production of Knowledge by Science and Society Partnership for Global Personalized Medicine.

Ozdemir V, Muljono DH, Pang T, Ferguson LR, Manamperi A, Samper S, Someya T, Tassé AM, Tsai SJ, Zhou HH, Lee EJ.

Curr Pharmacogenomics Person Med. 2011 Mar 1;9(1):1-5. No abstract available.

40.

Deciphering the role of IS6110 in a highly transmissible Mycobacterium tuberculosis Beijing strain, GC1237.

Alonso H, Aguilo JI, Samper S, Caminero JA, Campos-Herrero MI, Gicquel B, Brosch R, Martín C, Otal I.

Tuberculosis (Edinb). 2011 Mar;91(2):117-26. doi: 10.1016/j.tube.2010.12.007. Epub 2011 Jan 20.

PMID:
21256084
41.

Personalized Medicine Beyond Genomics: New Technologies, Global Health Diplomacy and Anticipatory Governance.

Ozdemir V, Husereau D, Hyland S, Samper S, Salleh MZ.

Curr Pharmacogenomics Person Med. 2009 Dec;7(4):225-230. No abstract available.

42.

[Detection of multidrug-resistant Mycobacterium tuberculosis in a pediatric patient with choroiditis].

Cameo MI, Lezcano MA, Samper S, Revillo MJ.

Enferm Infecc Microbiol Clin. 2010 Oct;28(8):560-2. doi: 10.1016/j.eimc.2009.10.003. Epub 2010 May 23. Spanish. No abstract available.

PMID:
20546979
43.

Characterization of Mycobacterium tuberculosis Beijing isolates from the Mediterranean area.

Alonso M, Alonso Rodriguez N, Garzelli C, Martínez Lirola M, Herranz M, Samper S, Ruiz Serrano MJ, Bouza E, García de Viedma D.

BMC Microbiol. 2010 May 25;10:151. doi: 10.1186/1471-2180-10-151.

44.

First insights into the genetic diversity of Mycobacterium tuberculosis isolates from HIV-infected Mexican patients and mutations causing multidrug resistance.

Lopez-Alvarez R, Badillo-Lopez C, Cerna-Cortes JF, Castillo-Ramirez I, Rivera-Gutierrez S, Helguera-Repetto AC, Aguilar D, Hernandez-Pando R, Samper S, Gonzalez-y-Merchand JA.

BMC Microbiol. 2010 Mar 17;10:82. doi: 10.1186/1471-2180-10-82.

45.

Human tuberculosis due to Mycobacterium bovis and M. caprae in Spain, 2004-2007.

Rodríguez E, Sánchez LP, Pérez S, Herrera L, Jiménez MS, Samper S, Iglesias MJ.

Int J Tuberc Lung Dis. 2009 Dec;13(12):1536-41.

PMID:
19919773
46.

Multidrug-resistant Mycobacterium tuberculosis strain from Equatorial Guinea detected in Spain.

Gavín P, Iglesias MJ, Jiménez MS, Herrera-Leon L, Rodríguez-Valín E, Rastogi N, March J, González-Palacios R, Palenque E, Ayarza R, Hurra E, Campos-Herrero I, Vitoria MA, Lezcano MA, Revillo MJ, Martin C, Samper S.

Emerg Infect Dis. 2009 Nov;15(11):1858-60. doi: 10.3201/eid1511.090449. No abstract available.

47.

Unsuspected and extensive transmission of a drug-susceptible Mycobacterium tuberculosis strain.

López-Calleja AI, Gavín P, Lezcano MA, Vitoria MA, Iglesias MJ, Guimbao J, Lázaro MA, Rastogi N, Revillo MJ, Martín C, Samper S.

BMC Pulm Med. 2009 Jan 14;9:3. doi: 10.1186/1471-2466-9-3.

48.

Multidrug-resistant Mycobacterium tuberculosis Beijing/W genotype in Venezuela.

Aristimuño L, España M, Guilarte A, Ramírez C, Rojas J, Gavín P, López-Calleja AI, Lezcano MA, Revillo MJ, Cebollada A, Martín C, Samper S.

J Med Microbiol. 2007 Dec;56(Pt 12):1707-8. No abstract available.

PMID:
18033847
49.

Genotyping of Mycobacterium tuberculosis over two periods: a changing scenario for tuberculosis transmission.

López-Calleja AI, Lezcano MA, Vitoria MA, Iglesias MJ, Cebollada A, Lafoz C, Gavin P, Aristimuño L, Revillo MJ, Martin C, Samper S.

Int J Tuberc Lung Dis. 2007 Oct;11(10):1080-6.

PMID:
17945064
50.

Spread of extensively drug-resistant tuberculosis.

Samper S, Martín C.

Emerg Infect Dis. 2007 Apr;13(4):647-8. No abstract available.

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