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Evolution: Genomic Signatures of Mimicry and Mimicry of Genomic Signatures.

Matschiner M, Salzburger W.

Curr Biol. 2019 May 20;29(10):R363-R365. doi: 10.1016/j.cub.2019.04.015.


Vision using multiple distinct rod opsins in deep-sea fishes.

Musilova Z, Cortesi F, Matschiner M, Davies WIL, Patel JS, Stieb SM, de Busserolles F, Malmstrøm M, Tørresen OK, Brown CJ, Mountford JK, Hanel R, Stenkamp DL, Jakobsen KS, Carleton KL, Jentoft S, Marshall J, Salzburger W.

Science. 2019 May 10;364(6440):588-592. doi: 10.1126/science.aav4632.


An exploration of the links between parasites, trophic ecology, morphology, and immunogenetics in the Lake Tanganyika cichlid radiation.

Meyer BS, Hablützel PI, Roose AK, Hofmann MJ, Salzburger W, Raeymaekers JAM.

Hydrobiologia. 2019;832(1):215-233. doi: 10.1007/s10750-018-3798-2. Epub 2018 Oct 26.


Repeated Evolution Versus Common Ancestry: Sex Chromosome Evolution in the Haplochromine Cichlid Pseudocrenilabrus philander.

Böhne A, Weber AA, Rajkov J, Rechsteiner M, Riss A, Egger B, Salzburger W.

Genome Biol Evol. 2019 Feb 1;11(2):439-458. doi: 10.1093/gbe/evz003.


Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni.

El Taher A, Lichilín N, Salzburger W, Böhne A.

BMC Genomics. 2019 Jan 14;20(1):39. doi: 10.1186/s12864-018-5321-6.


Phylogenomics of an extra-Antarctic notothenioid radiation reveals a previously unrecognized lineage and diffuse species boundaries.

Ceballos SG, Roesti M, Matschiner M, Fernández DA, Damerau M, Hanel R, Salzburger W.

BMC Evol Biol. 2019 Jan 10;19(1):13. doi: 10.1186/s12862-019-1345-z.


Real-time social selection maintains honesty of a dynamic visual signal in cooperative fish.

Bachmann JC, Cortesi F, Hall MD, Marshall NJ, Salzburger W, Gante HF.

Evol Lett. 2017 Oct 25;1(5):269-278. doi: 10.1002/evl3.24. eCollection 2017 Nov.


Immigrant and extrinsic hybrid inviability contribute to reproductive isolation between lake and river cichlid ecotypes.

Rajkov J, Weber AA, Salzburger W, Egger B.

Evolution. 2018 Nov;72(11):2553-2564. doi: 10.1111/evo.13612. Epub 2018 Oct 7.


Adaptive phenotypic plasticity contributes to divergence between lake and river populations of an East African cichlid fish.

Rajkov J, Weber AA, Salzburger W, Egger B.

Ecol Evol. 2018 Jun 27;8(15):7323-7333. doi: 10.1002/ece3.4241. eCollection 2018 Aug.


Understanding explosive diversification through cichlid fish genomics.

Salzburger W.

Nat Rev Genet. 2018 Nov;19(11):705-717. doi: 10.1038/s41576-018-0043-9. Review.


Mouth dimorphism in scale-eating cichlid fish from Lake Tanganyika advances individual fitness.

Indermaur A, Theis A, Egger B, Salzburger W.

Evolution. 2018 Sep;72(9):1962-1969. doi: 10.1111/evo.13552. Epub 2018 Jul 30.


Correction: Genetic diversity, genetic structure and diet of ancient and contemporary red deer (Cervus elaphus L.) from north-eastern France.

Schnitzler A, Granado J, Putelat O, Arbogast RM, Drucker D, Eberhard A, Schmutz A, Klaefiger Y, Lang G, Salzburger W, Schibler J, Schlumbaum A, Bocherens H.

PLoS One. 2018 Jun 25;13(6):e0199945. doi: 10.1371/journal.pone.0199945. eCollection 2018.


The puzzling phylogeography of the haplochromine cichlid fish Astatotilapia burtoni.

Pauquet G, Salzburger W, Egger B.

Ecol Evol. 2018 May 2;8(11):5637-5648. doi: 10.1002/ece3.4092. eCollection 2018 Jun.


Evolution: An Archipelago Replete with Replicates.

Muschick M, Salzburger W.

Curr Biol. 2018 May 7;28(9):R565-R567. doi: 10.1016/j.cub.2018.03.032.


The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes.

Malmstrøm M, Britz R, Matschiner M, Tørresen OK, Hadiaty RK, Yaakob N, Tan HH, Jakobsen KS, Salzburger W, Rüber L.

Genome Biol Evol. 2018 Apr 1;10(4):1088-1103. doi: 10.1093/gbe/evy058.


Study of morphological variation of northern Neotropical Ariidae reveals conservatism despite macrohabitat transitions.

Stange M, Aguirre-Fernández G, Salzburger W, Sánchez-Villagra MR.

BMC Evol Biol. 2018 Mar 27;18(1):38. doi: 10.1186/s12862-018-1152-y.


Effects of parental care on resource allocation into immune defense and buccal microbiota in mouthbrooding cichlid fishes.

Keller IS, Bayer T, Salzburger W, Roth O.

Evolution. 2018 May;72(5):1109-1123. doi: 10.1111/evo.13452. Epub 2018 Mar 12.


Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus.

Stange M, Sánchez-Villagra MR, Salzburger W, Matschiner M.

Syst Biol. 2018 Jul 1;67(4):681-699. doi: 10.1093/sysbio/syy006.


Genetic diversity, genetic structure and diet of ancient and contemporary red deer (Cervus elaphus L.) from north-eastern France.

Schnitzler A, Granado J, Putelat O, Arbogast RM, Drucker D, Eberhard A, Schmutz A, Klaefiger Y, Lang G, Salzburger W, Schibler J, Schlumbaum A, Bocherens H.

PLoS One. 2018 Jan 5;13(1):e0189278. doi: 10.1371/journal.pone.0189278. eCollection 2018. Erratum in: PLoS One. 2018 Jun 25;13(6):e0199945.


Parental investment matters for maternal and offspring immune defense in the mouthbrooding cichlid Astatotilapia burtoni.

Keller IS, Salzburger W, Roth O.

BMC Evol Biol. 2017 Dec 20;17(1):264. doi: 10.1186/s12862-017-1109-6.


De novo gene evolution of antifreeze glycoproteins in codfishes revealed by whole genome sequence data.

Baalsrud HT, Tørresen OK, Hongrø Solbakken M, Salzburger W, Hanel R, Jakobsen KS, Jentoft S.

Mol Biol Evol. 2017 Dec 5. doi: 10.1093/molbev/msx311. [Epub ahead of print]


Deciphering the Origin and Evolution of Hepatitis B Viruses by Means of a Family of Non-enveloped Fish Viruses.

Lauber C, Seitz S, Mattei S, Suh A, Beck J, Herstein J, Börold J, Salzburger W, Kaderali L, Briggs JAG, Bartenschlager R.

Cell Host Microbe. 2017 Sep 13;22(3):387-399.e6. doi: 10.1016/j.chom.2017.07.019. Epub 2017 Aug 31.


Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth.

Baalsrud HT, Voje KL, Tørresen OK, Solbakken MH, Matschiner M, Malmstrøm M, Hanel R, Salzburger W, Jakobsen KS, Jentoft S.

Sci Rep. 2017 Aug 11;7(1):7956. doi: 10.1038/s41598-017-08286-2.


Demography and genome divergence of lake and stream populations of an East African cichlid fish.

Egger B, Roesti M, Böhne A, Roth O, Salzburger W.

Mol Ecol. 2017 Oct;26(19):5016-5030. doi: 10.1111/mec.14248. Epub 2017 Sep 11.


Convergence of gut microbiotas in the adaptive radiations of African cichlid fishes.

Baldo L, Pretus JL, Riera JL, Musilova Z, Bitja Nyom AR, Salzburger W.

ISME J. 2017 Sep;11(9):1975-1987. doi: 10.1038/ismej.2017.62. Epub 2017 May 16.


Bayesian Phylogenetic Estimation of Clade Ages Supports Trans-Atlantic Dispersal of Cichlid Fishes.

Matschiner M, Musilová Z, Barth JM, Starostová Z, Salzburger W, Steel M, Bouckaert R.

Syst Biol. 2017 Jan 1;66(1):3-22. doi: 10.1093/sysbio/syw076.


Variation of anal fin egg-spots along an environmental gradient in a haplochromine cichlid fish.

Theis A, Roth O, Cortesi F, Ronco F, Salzburger W, Egger B.

Evolution. 2017 Mar;71(3):766-777. doi: 10.1111/evo.13166. Epub 2017 Feb 2.


Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes.

Stieb SM, Cortesi F, Sueess L, Carleton KL, Salzburger W, Marshall NJ.

Mol Ecol. 2017 Mar;26(5):1323-1342. doi: 10.1111/mec.13968. Epub 2017 Jan 27.


Variations on a theme: Genomics of sex determination in the cichlid fish Astatotilapia burtoni.

Böhne A, Wilson CA, Postlethwait JH, Salzburger W.

BMC Genomics. 2016 Nov 7;17(1):883.


Environmental context for understanding the iconic adaptive radiation of cichlid fishes in Lake Malawi.

Malinsky M, Salzburger W.

Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):11654-11656. Epub 2016 Oct 6. No abstract available.


Comparative transcriptomics of anal fin pigmentation patterns in cichlid fishes.

Santos ME, Baldo L, Gu L, Boileau N, Musilova Z, Salzburger W.

BMC Genomics. 2016 Sep 6;17:712. doi: 10.1186/s12864-016-3046-y.


Evolution of the immune system influences speciation rates in teleost fishes.

Malmstrøm M, Matschiner M, Tørresen OK, Star B, Snipen LG, Hansen TF, Baalsrud HT, Nederbragt AJ, Hanel R, Salzburger W, Stenseth NC, Jakobsen KS, Jentoft S.

Nat Genet. 2016 Oct;48(10):1204-10. doi: 10.1038/ng.3645. Epub 2016 Aug 22.


Evolution of opercle bone shape along a macrohabitat gradient: species identification using mtDNA and geometric morphometric analyses in neotropical sea catfishes (Ariidae).

Stange M, Aguirre-Fernández G, Cooke RG, Barros T, Salzburger W, Sánchez-Villagra MR.

Ecol Evol. 2016 Jul 22;6(16):5817-30. doi: 10.1002/ece3.2334. eCollection 2016 Aug.


Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes.

Meyer BS, Matschiner M, Salzburger W.

Syst Biol. 2017 Jul 1;66(4):531-550. doi: 10.1093/sysbio/syw069.


Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika.

Gante HF, Matschiner M, Malmstrøm M, Jakobsen KS, Jentoft S, Salzburger W.

Mol Ecol. 2016 Dec;25(24):6143-6161. doi: 10.1111/mec.13767. Epub 2016 Aug 26.


From crypsis to mimicry: changes in colour and the configuration of the visual system during ontogenetic habitat transitions in a coral reef fish.

Cortesi F, Musilová Z, Stieb SM, Hart NS, Siebeck UE, Cheney KL, Salzburger W, Marshall NJ.

J Exp Biol. 2016 Aug 15;219(Pt 16):2545-58. doi: 10.1242/jeb.139501. Epub 2016 Jun 15.


Depth-dependent plasticity in opsin gene expression varies between damselfish (Pomacentridae) species.

Stieb SM, Carleton KL, Cortesi F, Marshall NJ, Salzburger W.

Mol Ecol. 2016 Aug;25(15):3645-61. doi: 10.1111/mec.13712. Epub 2016 Jul 2.


Inhibition of Aromatase Induces Partial Sex Change in a Cichlid Fish: Distinct Functions for Sex Steroids in Brains and Gonads.

Göppert C, Harris RM, Theis A, Boila A, Hohl S, Rüegg A, Hofmann HA, Salzburger W, Böhne A.

Sex Dev. 2016;10(2):97-110. doi: 10.1159/000445463. Epub 2016 Apr 26.


Speciation: Genomic Archipelagos in a Crater Lake.

Ronco F, Salzburger W.

Curr Biol. 2016 Mar 7;26(5):R197-9. doi: 10.1016/j.cub.2016.01.057.


Evolution of opercle shape in cichlid fishes from Lake Tanganyika - adaptive trait interactions in extant and extinct species flocks.

Wilson LA, Colombo M, Sánchez-Villagra MR, Salzburger W.

Sci Rep. 2015 Nov 20;5:16909. doi: 10.1038/srep16909.


A complex mode of aggressive mimicry in a scale-eating cichlid fish.

Boileau N, Cortesi F, Egger B, Muschick M, Indermaur A, Theis A, Büscher HH, Salzburger W.

Biol Lett. 2015 Sep;11(9):20150521. doi: 10.1098/rsbl.2015.0521.


Evolutionary Fate of the Androgen Receptor-Signaling Pathway in Ray-Finned Fishes with a Special Focus on Cichlids.

Lorin T, Salzburger W, Böhne A.

G3 (Bethesda). 2015 Sep 1;5(11):2275-83. doi: 10.1534/g3.115.020685.


The genomics of organismal diversification illuminated by adaptive radiations.

Berner D, Salzburger W.

Trends Genet. 2015 Sep;31(9):491-9. doi: 10.1016/j.tig.2015.07.002. Epub 2015 Aug 7. Review.


Back to Tanganyika: a case of recent trans-species-flock dispersal in East African haplochromine cichlid fishes.

Meyer BS, Indermaur A, Ehrensperger X, Egger B, Banyankimbona G, Snoeks J, Salzburger W.

R Soc Open Sci. 2015 Mar 4;2(3):140498. doi: 10.1098/rsos.140498. eCollection 2015 Mar.


Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes.

Baldo L, Riera JL, Tooming-Klunderud A, Albà MM, Salzburger W.

PLoS One. 2015 May 15;10(5):e0127462. doi: 10.1371/journal.pone.0127462. eCollection 2015.


Intrinsic and extrinsic factors act at different spatial and temporal scales to shape population structure, distribution and speciation in Italian Barbus (Osteichthyes: Cyprinidae).

Buonerba L, Zaccara S, Delmastro GB, Lorenzoni M, Salzburger W, Gante HF.

Mol Phylogenet Evol. 2015 Aug;89:115-29. doi: 10.1016/j.ympev.2015.03.024. Epub 2015 Apr 14.


Phenotypic plasticity confers multiple fitness benefits to a mimic.

Cortesi F, Feeney WE, Ferrari MC, Waldie PA, Phillips GA, McClure EC, Sköld HN, Salzburger W, Marshall NJ, Cheney KL.

Curr Biol. 2015 Mar 30;25(7):949-54. doi: 10.1016/j.cub.2015.02.013. Epub 2015 Mar 19.


The locus of sexual selection: moving sexual selection studies into the post-genomics era.

Wilkinson GS, Breden F, Mank JE, Ritchie MG, Higginson AD, Radwan J, Jaquiery J, Salzburger W, Arriero E, Barribeau SM, Phillips PC, Renn SC, Rowe L.

J Evol Biol. 2015 Apr;28(4):739-55. doi: 10.1111/jeb.12621. Epub 2015 Apr 17. Review.


Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes.

Cortesi F, Musilová Z, Stieb SM, Hart NS, Siebeck UE, Malmstrøm M, Tørresen OK, Jentoft S, Cheney KL, Marshall NJ, Carleton KL, Salzburger W.

Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1493-8. doi: 10.1073/pnas.1417803112. Epub 2014 Dec 29.

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