Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 33

1.

Prediagnostic breast milk DNA methylation alterations in women who develop breast cancer.

Salas LA, Lundgren SN, Browne EP, Punska EC, Anderton DL, Karagas MR, Arcaro KF, Christensen BC.

Hum Mol Genet. 2020 Jan 16. pii: ddz301. doi: 10.1093/hmg/ddz301. [Epub ahead of print]

PMID:
31943067
2.

Newborn and childhood differential DNA methylation and liver fat in school-age children.

Geurtsen ML, Jaddoe VWV, Salas LA, Santos S, Felix JF.

Clin Epigenetics. 2019 Dec 31;12(1):3. doi: 10.1186/s13148-019-0799-6.

3.

PathFlowAI: A High-Throughput Workflow for Preprocessing, Deep Learning and Interpretation in Digital Pathology.

Levy JJ, Salas LA, Christensen BC, Sriharan A, Vaickus LJ.

Pac Symp Biocomput. 2020;25:403-414.

4.

Maternal Gestational Diabetes Mellitus and Newborn DNA Methylation: Findings From the Pregnancy and Childhood Epigenetics Consortium.

Howe CG, Cox B, Fore R, Jungius J, Kvist T, Lent S, Miles HE, Salas LA, Rifas-Shiman S, Starling AP, Yousefi P, Ladd-Acosta C, Baccarelli A, Binder EB, Chatzi VL, Czamara D, Dabelea D, DeMeo DL, Ghantous A, Herceg Z, Kajantie E, Lahti JMT, Lawlor DA, Litonjua A, Nawrot TS, Nohr EA, Oken E, Pizzi C, Plusquin M, Räikkönen K, Relton CL, Sharp GC, Sørensen TIA, Sunyer J, Vrijheid M, Zhang W, Hivert MF, Breton CV.

Diabetes Care. 2020 Jan;43(1):98-105. doi: 10.2337/dc19-0524. Epub 2019 Oct 10.

PMID:
31601636
5.

Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data.

Gervin K, Salas LA, Bakulski KM, van Zelm MC, Koestler DC, Wiencke JK, Duijts L, Moll HA, Kelsey KT, Kobor MS, Lyle R, Christensen BC, Felix JF, Jones MJ.

Clin Epigenetics. 2019 Aug 27;11(1):125. doi: 10.1186/s13148-019-0717-y.

6.

PyMethylProcess-convenient high-throughput preprocessing workflow for DNA methylation data.

Levy JJ, Titus AJ, Salas LA, Christensen BC.

Bioinformatics. 2019 Dec 15;35(24):5379-5381. doi: 10.1093/bioinformatics/btz594.

PMID:
31368477
7.

Absence of an embryonic stem cell DNA methylation signature in human cancer.

Zhang Z, Wiencke JK, Koestler DC, Salas LA, Christensen BC, Kelsey KT.

BMC Cancer. 2019 Jul 19;19(1):711. doi: 10.1186/s12885-019-5932-6.

8.

Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight.

Küpers LK, Monnereau C, Sharp GC, Yousefi P, Salas LA, Ghantous A, Page CM, Reese SE, Wilcox AJ, Czamara D, Starling AP, Novoloaca A, Lent S, Roy R, Hoyo C, Breton CV, Allard C, Just AC, Bakulski KM, Holloway JW, Everson TM, Xu CJ, Huang RC, van der Plaat DA, Wielscher M, Merid SK, Ullemar V, Rezwan FI, Lahti J, van Dongen J, Langie SAS, Richardson TG, Magnus MC, Nohr EA, Xu Z, Duijts L, Zhao S, Zhang W, Plusquin M, DeMeo DL, Solomon O, Heimovaara JH, Jima DD, Gao L, Bustamante M, Perron P, Wright RO, Hertz-Picciotto I, Zhang H, Karagas MR, Gehring U, Marsit CJ, Beilin LJ, Vonk JM, Jarvelin MR, Bergström A, Örtqvist AK, Ewart S, Villa PM, Moore SE, Willemsen G, Standaert ARL, Håberg SE, Sørensen TIA, Taylor JA, Räikkönen K, Yang IV, Kechris K, Nawrot TS, Silver MJ, Gong YY, Richiardi L, Kogevinas M, Litonjua AA, Eskenazi B, Huen K, Mbarek H, Maguire RL, Dwyer T, Vrijheid M, Bouchard L, Baccarelli AA, Croen LA, Karmaus W, Anderson D, de Vries M, Sebert S, Kere J, Karlsson R, Arshad SH, Hämäläinen E, Routledge MN, Boomsma DI, Feinberg AP, Newschaffer CJ, Govarts E, Moisse M, Fallin MD, Melén E, Prentice AM, Kajantie E, Almqvist C, Oken E, Dabelea D, Boezen HM, Melton PE, Wright RJ, Koppelman GH, Trevisi L, Hivert MF, Sunyer J, Munthe-Kaas MC, Murphy SK, Corpeleijn E, Wiemels J, Holland N, Herceg Z, Binder EB, Davey Smith G, Jaddoe VWV, Lie RT, Nystad W, London SJ, Lawlor DA, Relton CL, Snieder H, Felix JF.

Nat Commun. 2019 Apr 23;10(1):1893. doi: 10.1038/s41467-019-09671-3.

9.

Newborn DNA-methylation, childhood lung function, and the risks of asthma and COPD across the life course.

den Dekker HT, Burrows K, Felix JF, Salas LA, Nedeljkovic I, Yao J, Rifas-Shiman SL, Ruiz-Arenas C, Amin N, Bustamante M, DeMeo DL, Henderson AJ, Howe CG, Hivert MF, Ikram MA, de Jongste JC, Lahousse L, Mandaviya PR, van Meurs JB, Pinart M, Sharp GC, Stolk L, Uitterlinden AG, Anto JM, Litonjua AA, Breton CV, Brusselle GG, Sunyer J, Smith GD, Relton CL, Jaddoe VWV, Duijts L.

Eur Respir J. 2019 Apr 4;53(4). pii: 1801795. doi: 10.1183/13993003.01795-2018. Print 2019 Apr.

PMID:
30765504
10.

Molecular and epigenetic profiles of BRCA1-like hormone-receptor-positive breast tumors identified with development and application of a copy-number-based classifier.

Chen Y, Wang Y, Salas LA, Miller TW, Mark K, Marotti JD, Kettenbach AN, Cheng C, Christensen BC.

Breast Cancer Res. 2019 Jan 25;21(1):14. doi: 10.1186/s13058-018-1090-z.

11.

Maternal swimming pool exposure during pregnancy in relation to birth outcomes and cord blood DNA methylation among private well users.

Salas LA, Baker ER, Nieuwenhuijsen MJ, Marsit CJ, Christensen BC, Karagas MR.

Environ Int. 2019 Feb;123:459-466. doi: 10.1016/j.envint.2018.12.017. Epub 2019 Jan 5.

12.

Genome-wide DNA methylation profiling shows a distinct epigenetic signature associated with lung macrophages in cystic fibrosis.

Chen Y, Armstrong DA, Salas LA, Hazlett HF, Nymon AB, Dessaint JA, Aridgides DS, Mellinger DL, Liu X, Christensen BC, Ashare A.

Clin Epigenetics. 2018 Dec 10;10(1):152. doi: 10.1186/s13148-018-0580-2.

13.

NLRP3 expression in mesencephalic neurons and characterization of a rare NLRP3 polymorphism associated with decreased risk of Parkinson's disease.

von Herrmann KM, Salas LA, Martinez EM, Young AL, Howard JM, Feldman MS, Christensen BC, Wilkins OM, Lee SL, Hickey WF, Havrda MC.

NPJ Parkinsons Dis. 2018 Aug 15;4:24. doi: 10.1038/s41531-018-0061-5. eCollection 2018.

14.

Tracing human stem cell lineage during development using DNA methylation.

Salas LA, Wiencke JK, Koestler DC, Zhang Z, Christensen BC, Kelsey KT.

Genome Res. 2018 Sep;28(9):1285-1295. doi: 10.1101/gr.233213.117. Epub 2018 Aug 2.

15.

MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma.

Wilkins OM, Titus AJ, Salas LA, Gui J, Eliot M, Butler RA, Sturgis EM, Li G, Kelsey KT, Christensen BC.

Cancer Epidemiol Biomarkers Prev. 2019 Jan;28(1):127-136. doi: 10.1158/1055-9965.EPI-18-0002. Epub 2018 Jun 7.

16.

An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray.

Salas LA, Koestler DC, Butler RA, Hansen HM, Wiencke JK, Kelsey KT, Christensen BC.

Genome Biol. 2018 May 29;19(1):64. doi: 10.1186/s13059-018-1448-7.

17.

Maternal BMI at the start of pregnancy and offspring epigenome-wide DNA methylation: findings from the pregnancy and childhood epigenetics (PACE) consortium.

Sharp GC, Salas LA, Monnereau C, Allard C, Yousefi P, Everson TM, Bohlin J, Xu Z, Huang RC, Reese SE, Xu CJ, Baïz N, Hoyo C, Agha G, Roy R, Holloway JW, Ghantous A, Merid SK, Bakulski KM, Küpers LK, Zhang H, Richmond RC, Page CM, Duijts L, Lie RT, Melton PE, Vonk JM, Nohr EA, Williams-DeVane C, Huen K, Rifas-Shiman SL, Ruiz-Arenas C, Gonseth S, Rezwan FI, Herceg Z, Ekström S, Croen L, Falahi F, Perron P, Karagas MR, Quraishi BM, Suderman M, Magnus MC, Jaddoe VWV, Taylor JA, Anderson D, Zhao S, Smit HA, Josey MJ, Bradman A, Baccarelli AA, Bustamante M, Håberg SE, Pershagen G, Hertz-Picciotto I, Newschaffer C, Corpeleijn E, Bouchard L, Lawlor DA, Maguire RL, Barcellos LF, Davey Smith G, Eskenazi B, Karmaus W, Marsit CJ, Hivert MF, Snieder H, Fallin MD, Melén E, Munthe-Kaas MC, Arshad H, Wiemels JL, Annesi-Maesano I, Vrijheid M, Oken E, Holland N, Murphy SK, Sørensen TIA, Koppelman GH, Newnham JP, Wilcox AJ, Nystad W, London SJ, Felix JF, Relton CL.

Hum Mol Genet. 2017 Oct 15;26(20):4067-4085. doi: 10.1093/hmg/ddx290.

18.

Cell-type deconvolution from DNA methylation: a review of recent applications.

Titus AJ, Gallimore RM, Salas LA, Christensen BC.

Hum Mol Genet. 2017 Oct 1;26(R2):R216-R224. doi: 10.1093/hmg/ddx275. Review.

19.

Gene expression changes in blood RNA after swimming in a chlorinated pool.

Salas LA, Font-Ribera L, Bustamante M, Sumoy L, Grimalt JO, Bonnin S, Aguilar M, Mattlin H, Hummel M, Ferrer A, Kogevinas M, Villanueva CM.

J Environ Sci (China). 2017 Aug;58:250-261. doi: 10.1016/j.jes.2017.05.011. Epub 2017 May 16.

PMID:
28774616
20.

Integrative epigenetic and genetic pan-cancer somatic alteration portraits.

Salas LA, Johnson KC, Koestler DC, O'Sullivan DE, Christensen BC.

Epigenetics. 2017 Jul 3;12(7):561-574. doi: 10.1080/15592294.2017.1319043. Epub 2017 Apr 20.

21.

Immunomethylomic approach to explore the blood neutrophil lymphocyte ratio (NLR) in glioma survival.

Wiencke JK, Koestler DC, Salas LA, Wiemels JL, Roy RP, Hansen HM, Rice T, McCoy LS, Bracci PM, Molinaro AM, Kelsey KT, Wrensch MR, Christensen BC.

Clin Epigenetics. 2017 Feb 2;9:10. doi: 10.1186/s13148-017-0316-8. eCollection 2017.

22.

Genome-wide DNA methylation study in human placenta identifies novel loci associated with maternal smoking during pregnancy.

Morales E, Vilahur N, Salas LA, Motta V, Fernandez MF, Murcia M, Llop S, Tardon A, Fernandez-Tardon G, Santa-Marina L, Gallastegui M, Bollati V, Estivill X, Olea N, Sunyer J, Bustamante M.

Int J Epidemiol. 2016 Oct;45(5):1644-1655. Epub 2016 Sep 1.

PMID:
27591263
23.

Corrigendum. Identification of a new locus and validation of previously reported loci showing differential methylation associated with smoking. The REGICOR study.

Sayols-Baixeras S, Lluís-Ganella C, Subirana I, Salas LA, Vilahur N, Corella D, Muñoz D, Segura A, Jimenez-Conde J, Moran S, Soriano-Tárraga C, Roquer J, Lopez-Farré A, Marrugat J, Fitó M, Elosua R.

Epigenetics. 2016;11(2):174. doi: 10.1080/15592294.2016.1162044. No abstract available.

24.

DNA Methylation in Newborns and Maternal Smoking in Pregnancy: Genome-wide Consortium Meta-analysis.

Joubert BR, Felix JF, Yousefi P, Bakulski KM, Just AC, Breton C, Reese SE, Markunas CA, Richmond RC, Xu CJ, Küpers LK, Oh SS, Hoyo C, Gruzieva O, Söderhäll C, Salas LA, Baïz N, Zhang H, Lepeule J, Ruiz C, Ligthart S, Wang T, Taylor JA, Duijts L, Sharp GC, Jankipersadsing SA, Nilsen RM, Vaez A, Fallin MD, Hu D, Litonjua AA, Fuemmeler BF, Huen K, Kere J, Kull I, Munthe-Kaas MC, Gehring U, Bustamante M, Saurel-Coubizolles MJ, Quraishi BM, Ren J, Tost J, Gonzalez JR, Peters MJ, Håberg SE, Xu Z, van Meurs JB, Gaunt TR, Kerkhof M, Corpeleijn E, Feinberg AP, Eng C, Baccarelli AA, Benjamin Neelon SE, Bradman A, Merid SK, Bergström A, Herceg Z, Hernandez-Vargas H, Brunekreef B, Pinart M, Heude B, Ewart S, Yao J, Lemonnier N, Franco OH, Wu MC, Hofman A, McArdle W, Van der Vlies P, Falahi F, Gillman MW, Barcellos LF, Kumar A, Wickman M, Guerra S, Charles MA, Holloway J, Auffray C, Tiemeier HW, Smith GD, Postma D, Hivert MF, Eskenazi B, Vrijheid M, Arshad H, Antó JM, Dehghan A, Karmaus W, Annesi-Maesano I, Sunyer J, Ghantous A, Pershagen G, Holland N, Murphy SK, DeMeo DL, Burchard EG, Ladd-Acosta C, Snieder H, Nystad W, Koppelman GH, Relton CL, Jaddoe VW, Wilcox A, Melén E, London SJ.

Am J Hum Genet. 2016 Apr 7;98(4):680-96. doi: 10.1016/j.ajhg.2016.02.019. Epub 2016 Mar 31.

25.

Identification of a new locus and validation of previously reported loci showing differential methylation associated with smoking. The REGICOR study.

Sayols-Baixeras S, Lluís-Ganella C, Subirana I, Salas LA, Vilahur N, Corella D, Muñoz D, Segura A, Jimenez-Conde J, Moran S, Soriano-Tárraga C, Roquer J, Lopez-Farré A, Marrugat J, Fitó M, Elosua R.

Epigenetics. 2015;10(12):1156-65. doi: 10.1080/15592294.2015.1115175. Erratum in: Epigenetics. 2016;11(2):174.

26.

Prenatal exposure to mixtures of xenoestrogens and genome-wide DNA methylation in human placenta.

Vilahur N, Bustamante M, Morales E, Motta V, Fernandez MF, Salas LA, Escaramis G, Ballester F, Murcia M, Tardon A, Riaño I, Santa-Marina L, Ibarluzea J, Arrebola JP, Estivill X, Bollati V, Sunyer J, Olea N.

Epigenomics. 2016 Jan;8(1):43-54. doi: 10.2217/epi.15.91. Epub 2015 Dec 18.

PMID:
26679211
27.

Overview of Disinfection By-products and Associated Health Effects.

Villanueva CM, Cordier S, Font-Ribera L, Salas LA, Levallois P.

Curr Environ Health Rep. 2015 Mar;2(1):107-15. doi: 10.1007/s40572-014-0032-x.

PMID:
26231245
28.

DNA methylation levels and long-term trihalomethane exposure in drinking water: an epigenome-wide association study.

Salas LA, Bustamante M, Gonzalez JR, Gracia-Lavedan E, Moreno V, Kogevinas M, Villanueva CM.

Epigenetics. 2015;10(7):650-61. doi: 10.1080/15592294.2015.1057672.

29.

LINE-1 methylation in granulocyte DNA and trihalomethane exposure is associated with bladder cancer risk.

Salas LA, Villanueva CM, Tajuddin SM, Amaral AF, Fernandez AF, Moore LE, Carrato A, Tardón A, Serra C, García-Closas R, Basagaña X, Rothman N, Silverman DT, Cantor KP, Kogevinas M, Real FX, Fraga MF, Malats N.

Epigenetics. 2014 Nov;9(11):1532-9. doi: 10.4161/15592294.2014.983377.

30.

Use of urinary trichloroacetic acid as an exposure biomarker of disinfection by-products in cancer studies.

Salas LA, Gracia-Lavedan E, Goñi F, Moreno V, Villanueva CM.

Environ Res. 2014 Nov;135:276-84. doi: 10.1016/j.envres.2014.09.018. Epub 2014 Oct 14.

PMID:
25462676
31.

Biological and statistical approaches for modeling exposure to specific trihalomethanes and bladder cancer risk.

Salas LA, Cantor KP, Tardon A, Serra C, Carrato A, Garcia-Closas R, Rothman N, Malats N, Silverman D, Kogevinas M, Villanueva CM.

Am J Epidemiol. 2013 Aug 15;178(4):652-60. doi: 10.1093/aje/kwt009. Epub 2013 May 5.

32.

A cluster-randomized controlled trial of handrubs for prevention of infectious diseases among children in Colombia.

Correa JC, Pinto D, Salas LA, Camacho JC, Rondón M, Quintero J.

Rev Panam Salud Publica. 2012 Jun;31(6):476-84.

PMID:
22858814
33.

Use of limestone karst forests by Bornean orangutans (Pongo pygmaeus morio) in the Sangkulirang peninsula, east Kalimantan, Indonesia.

Marshall AJ, Salas LA, Stephens S; Nardiyono, Engström L, Meijaard E, Stanley SA.

Am J Primatol. 2007 Feb;69(2):212-9.

PMID:
17146797

Supplemental Content

Loading ...
Support Center