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Items: 1 to 50 of 75

1.

The TGFβ-signaling pathway and colorectal cancer: associations between dysregulated genes and miRNAs.

Pellatt AJ, Mullany LE, Herrick JS, Sakoda LC, Wolff RK, Samowitz WS, Slattery ML.

J Transl Med. 2018 Jul 9;16(1):191. doi: 10.1186/s12967-018-1566-8.

2.

The p53-signaling pathway and colorectal cancer: Interactions between downstream p53 target genes and miRNAs.

Slattery ML, Mullany LE, Wolff RK, Sakoda LC, Samowitz WS, Herrick JS.

Genomics. 2018 Jun 1. pii: S0888-7543(18)30036-3. doi: 10.1016/j.ygeno.2018.05.006. [Epub ahead of print]

3.

miRNA involvement in cell cycle regulation in colorectal cancer cases.

Mullany LE, Herrick JS, Sakoda LC, Samowitz W, Stevens JR, Wolff RK, Slattery ML.

Genes Cancer. 2018 Jan;9(1-2):53-65. doi: 10.18632/genesandcancer.167.

4.

The MAPK-Signaling Pathway in Colorectal Cancer: Dysregulated Genes and Their Association With MicroRNAs.

Slattery ML, Mullany LE, Sakoda LC, Wolff RK, Samowitz WS, Herrick JS.

Cancer Inform. 2018 Mar 26;17:1176935118766522. doi: 10.1177/1176935118766522. eCollection 2018.

5.

Mutation analysis of adenomas and carcinomas of the colon: Early and late drivers.

Wolff RK, Hoffman MD, Wolff EC, Herrick JS, Sakoda LC, Samowitz WS, Slattery ML.

Genes Chromosomes Cancer. 2018 Jul;57(7):366-376. doi: 10.1002/gcc.22539. Epub 2018 Apr 30.

6.

Applying Risk Prediction Models to Optimize Lung Cancer Screening: Current Knowledge, Challenges, and Future Directions.

Sakoda LC, Henderson LM, Caverly TJ, Wernli KJ, Katki HA.

Curr Epidemiol Rep. 2017 Dec;4(4):307-320. doi: 10.1007/s40471-017-0126-8. Epub 2017 Oct 24.

PMID:
29531893
7.

Dysregulated genes and miRNAs in the apoptosis pathway in colorectal cancer patients.

Slattery ML, Mullany LE, Sakoda LC, Wolff RK, Samowitz WS, Herrick JS.

Apoptosis. 2018 Apr;23(3-4):237-250. doi: 10.1007/s10495-018-1451-1.

8.

Expression of Wnt-signaling pathway genes and their associations with miRNAs in colorectal cancer.

Slattery ML, Mullany LE, Sakoda LC, Samowitz WS, Wolff RK, Stevens JR, Herrick JS.

Oncotarget. 2017 Dec 23;9(5):6075-6085. doi: 10.18632/oncotarget.23636. eCollection 2018 Jan 19.

9.

The PI3K/AKT signaling pathway: Associations of miRNAs with dysregulated gene expression in colorectal cancer.

Slattery ML, Mullany LE, Sakoda LC, Wolff RK, Stevens JR, Samowitz WS, Herrick JS.

Mol Carcinog. 2018 Feb;57(2):243-261. doi: 10.1002/mc.22752. Epub 2017 Nov 19.

10.

Common TDP1 Polymorphisms in Relation to Survival among Small Cell Lung Cancer Patients: A Multicenter Study from the International Lung Cancer Consortium.

Lohavanichbutr P, Sakoda LC, Amos CI, Arnold SM, Christiani DC, Davies MPA, Field JK, Haura EB, Hung RJ, Kohno T, Landi MT, Liu G, Liu Y, Marcus MW, O'Kane GM, Schabath MB, Shiraishi K, Slone SA, Tardón A, Yang P, Yoshida K, Zhang R, Zong X, Goodman GE, Weiss NS, Chen C.

Clin Cancer Res. 2017 Dec 15;23(24):7550-7557. doi: 10.1158/1078-0432.CCR-17-1401. Epub 2017 Oct 3.

11.

Monitoring Lung Cancer Screening Use and Outcomes at Four Cancer Research Network Sites.

Gould MK, Sakoda LC, Ritzwoller DP, Simoff MJ, Neslund-Dudas CM, Kushi LH, Carter-Harris L, Feigelson HS, Minowada G, Doria-Rose VP.

Ann Am Thorac Soc. 2017 Dec;14(12):1827-1835. doi: 10.1513/AnnalsATS.201703-237OC.

PMID:
28683215
12.

Genetic contributors to variation in alcohol consumption vary by race/ethnicity in a large multi-ethnic genome-wide association study.

Jorgenson E, Thai KK, Hoffmann TJ, Sakoda LC, Kvale MN, Banda Y, Schaefer C, Risch N, Mertens J, Weisner C, Choquet H.

Mol Psychiatry. 2017 Sep;22(9):1359-1367. doi: 10.1038/mp.2017.101. Epub 2017 May 9.

13.

Genome-wide association study of prostate-specific antigen levels identifies novel loci independent of prostate cancer.

Hoffmann TJ, Passarelli MN, Graff RE, Emami NC, Sakoda LC, Jorgenson E, Habel LA, Shan J, Ranatunga DK, Quesenberry CP, Chao CR, Ghai NR, Aaronson D, Presti J, Nordström T, Wang Z, Berndt SI, Chanock SJ, Mosley JD, Klein RJ, Middha M, Lilja H, Melander O, Kvale MN, Kwok PY, Schaefer C, Risch N, Van Den Eeden SK, Witte JS.

Nat Commun. 2017 Jan 31;8:14248. doi: 10.1038/ncomms14248.

14.

Effect of Angiotensin System Inhibitors on Survival in Patients Receiving Chemotherapy for Advanced Non-Small-Cell Lung Cancer.

Menter AR, Carroll NM, Sakoda LC, Delate T, Hornbrook MC, Jain RK, Kushi LH, Quinn VP, Ritzwoller DP.

Clin Lung Cancer. 2017 Mar;18(2):189-197.e3. doi: 10.1016/j.cllc.2016.07.008. Epub 2016 Aug 20.

15.

Common coding variants in the HLA-DQB1 region confer susceptibility to age-related macular degeneration.

Jorgenson E, Melles RB, Hoffmann TJ, Jia X, Sakoda LC, Kvale MN, Banda Y, Schaefer C, Risch N, Shen L.

Eur J Hum Genet. 2016 Jul;24(7):1049-55. doi: 10.1038/ejhg.2015.247. Epub 2016 Jan 6.

16.

Differences in the Genetic Susceptibility to Age-Related Macular Degeneration Clinical Subtypes.

Shen L, Hoffmann TJ, Melles RB, Sakoda LC, Kvale MN, Banda Y, Schaefer C, Risch N, Jorgenson E.

Invest Ophthalmol Vis Sci. 2015 Jul;56(8):4290-9. doi: 10.1167/iovs.15-16533.

17.

Genotyping Informatics and Quality Control for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort.

Kvale MN, Hesselson S, Hoffmann TJ, Cao Y, Chan D, Connell S, Croen LA, Dispensa BP, Eshragh J, Finn A, Gollub J, Iribarren C, Jorgenson E, Kushi LH, Lao R, Lu Y, Ludwig D, Mathauda GK, McGuire WB, Mei G, Miles S, Mittman M, Patil M, Quesenberry CP Jr, Ranatunga D, Rowell S, Sadler M, Sakoda LC, Shapero M, Shen L, Shenoy T, Smethurst D, Somkin CP, Van Den Eeden SK, Walter L, Wan E, Webster T, Whitmer RA, Wong S, Zau C, Zhan Y, Schaefer C, Kwok PY, Risch N.

Genetics. 2015 Aug;200(4):1051-60. doi: 10.1534/genetics.115.178905. Epub 2015 Jun 19.

18.

Automated Assay of Telomere Length Measurement and Informatics for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort.

Lapham K, Kvale MN, Lin J, Connell S, Croen LA, Dispensa BP, Fang L, Hesselson S, Hoffmann TJ, Iribarren C, Jorgenson E, Kushi LH, Ludwig D, Matsuguchi T, McGuire WB, Miles S, Quesenberry CP Jr, Rowell S, Sadler M, Sakoda LC, Smethurst D, Somkin CP, Van Den Eeden SK, Walter L, Whitmer RA, Kwok PY, Risch N, Schaefer C, Blackburn EH.

Genetics. 2015 Aug;200(4):1061-72. doi: 10.1534/genetics.115.178624. Epub 2015 Jun 19.

19.

Characterizing Race/Ethnicity and Genetic Ancestry for 100,000 Subjects in the Genetic Epidemiology Research on Adult Health and Aging (GERA) Cohort.

Banda Y, Kvale MN, Hoffmann TJ, Hesselson SE, Ranatunga D, Tang H, Sabatti C, Croen LA, Dispensa BP, Henderson M, Iribarren C, Jorgenson E, Kushi LH, Ludwig D, Olberg D, Quesenberry CP Jr, Rowell S, Sadler M, Sakoda LC, Sciortino S, Shen L, Smethurst D, Somkin CP, Van Den Eeden SK, Walter L, Whitmer RA, Kwok PY, Schaefer C, Risch N.

Genetics. 2015 Aug;200(4):1285-95. doi: 10.1534/genetics.115.178616. Epub 2015 Jun 19.

20.

A large multiethnic genome-wide association study of prostate cancer identifies novel risk variants and substantial ethnic differences.

Hoffmann TJ, Van Den Eeden SK, Sakoda LC, Jorgenson E, Habel LA, Graff RE, Passarelli MN, Cario CL, Emami NC, Chao CR, Ghai NR, Shan J, Ranatunga DK, Quesenberry CP, Aaronson D, Presti J, Wang Z, Berndt SI, Chanock SJ, McDonnell SK, French AJ, Schaid DJ, Thibodeau SN, Li Q, Freedman ML, Penney KL, Mucci LA, Haiman CA, Henderson BE, Seminara D, Kvale MN, Kwok PY, Schaefer C, Risch N, Witte JS.

Cancer Discov. 2015 Aug;5(8):878-91. doi: 10.1158/2159-8290.CD-15-0315. Epub 2015 Jun 1.

21.

Metformin use and lung cancer risk in patients with diabetes.

Sakoda LC, Ferrara A, Achacoso NS, Peng T, Ehrlich SF, Quesenberry CP Jr, Habel LA.

Cancer Prev Res (Phila). 2015 Feb;8(2):174-9. doi: 10.1158/1940-6207.CAPR-14-0291.

22.

Imputation of the rare HOXB13 G84E mutation and cancer risk in a large population-based cohort.

Hoffmann TJ, Sakoda LC, Shen L, Jorgenson E, Habel LA, Liu J, Kvale MN, Asgari MM, Banda Y, Corley D, Kushi LH, Quesenberry CP Jr, Schaefer C, Van Den Eeden SK, Risch N, Witte JS.

PLoS Genet. 2015 Jan 28;11(1):e1004930. doi: 10.1371/journal.pgen.1004930. eCollection 2015 Jan. Erratum in: PLoS Genet. 2015 Apr;11(4):e1005114. PLoS Genet. 2015 Jun;11(6):e1005362.

23.

Cross-cancer pleiotropic analysis of endometrial cancer: PAGE and E2C2 consortia.

Setiawan VW, Schumacher F, Prescott J, Haessler J, Malinowski J, Wentzensen N, Yang H, Chanock S, Brinton L, Hartge P, Lissowska J, Park SL, Cheng I, Bush WS, Crawford DC, Ursin G, Horn-Ross P, Bernstein L, Lu L, Risch H, Yu H, Sakoda LC, Doherty J, Chen C, Jackson R, Yasmeen S, Cote M, Kocarnik JM, Peters U, Kraft P, De Vivo I, Haiman CA, Kooperberg C, Le Marchand L.

Carcinogenesis. 2014 Sep;35(9):2068-73. doi: 10.1093/carcin/bgu107. Epub 2014 May 15.

24.

DNA repair genotype and lung cancer risk in the beta-carotene and retinol efficacy trial.

Doherty JA, Sakoda LC, Loomis MM, Barnett MJ, Julianto L, Thornquist MD, Neuhouser ML, Weiss NS, Goodman GE, Chen C.

Int J Mol Epidemiol Genet. 2013;4(1):11-34. Epub 2013 Mar 18.

25.

Turning of COGS moves forward findings for hormonally mediated cancers.

Sakoda LC, Jorgenson E, Witte JS.

Nat Genet. 2013 Apr;45(4):345-8. doi: 10.1038/ng.2587.

PMID:
23535722
26.

HOXB13:IL17BR and molecular grade index and risk of breast cancer death among patients with lymph node-negative invasive disease.

Habel LA, Sakoda LC, Achacoso N, Ma XJ, Erlander MG, Sgroi DC, Fehrenbacher L, Greenberg D, Quesenberry CP Jr.

Breast Cancer Res. 2013 Mar 14;15(2):R24. doi: 10.1186/bcr3402.

27.

Aspirin but not ibuprofen use is associated with reduced risk of prostate cancer: a PLCO study.

Shebl FM, Sakoda LC, Black A, Koshiol J, Andriole GL, Grubb R, Church TR, Chia D, Zhou C, Chu LW, Huang WY, Peters U, Kirsh VA, Chatterjee N, Leitzmann MF, Hayes RB, Hsing AW.

Br J Cancer. 2012 Jun 26;107(1):207-14. doi: 10.1038/bjc.2012.227. Epub 2012 Jun 21.

28.

Germ line variation in nucleotide excision repair genes and lung cancer risk in smokers.

Sakoda LC, Loomis MM, Doherty JA, Julianto L, Barnett MJ, Neuhouser ML, Thornquist MD, Weiss NS, Goodman GE, Chen C.

Int J Mol Epidemiol Genet. 2012;3(1):1-17. Epub 2012 Feb 5.

29.

Polymorphisms in nucleotide excision repair genes and endometrial cancer risk.

Doherty JA, Weiss NS, Fish S, Fan W, Loomis MM, Sakoda LC, Rossing MA, Zhao LP, Chen C.

Cancer Epidemiol Biomarkers Prev. 2011 Sep;20(9):1873-82. doi: 10.1158/1055-9965.EPI-11-0119. Epub 2011 Jul 12.

30.

Chronic typhoid infection and the risk of biliary tract cancer and stones in Shanghai, China.

Safaeian M, Gao YT, Sakoda LC, Quraishi SM, Rashid A, Wang BS, Chen J, Pruckler J, Mintz E, Hsing AW.

Infect Agent Cancer. 2011 May 2;6:6. doi: 10.1186/1750-9378-6-6.

31.

Chromosome 15q24-25.1 variants, diet, and lung cancer susceptibility in cigarette smokers.

Sakoda LC, Loomis MM, Doherty JA, Neuhouser ML, Barnett MJ, Thornquist MD, Weiss NS, Goodman GE, Chen C.

Cancer Causes Control. 2011 Mar;22(3):449-61. doi: 10.1007/s10552-010-9716-1. Epub 2011 Jan 13.

32.

Selected estrogen receptor 1 and androgen receptor gene polymorphisms in relation to risk of breast cancer and fibrocystic breast conditions among Chinese women.

Sakoda LC, Blackston CR, Doherty JA, Ray RM, Lin MG, Gao DL, Stalsberg H, Feng Z, Thomas DB, Chen C.

Cancer Epidemiol. 2011 Feb;35(1):48-55. doi: 10.1016/j.canep.2010.08.005. Epub 2010 Sep 17.

33.

Reproductive factors and risks of biliary tract cancers and stones: a population-based study in Shanghai, China.

Andreotti G, Hou L, Gao YT, Brinton LA, Rashid A, Chen J, Shen MC, Wang BS, Han TQ, Zhang BH, Sakoda LC, Fraumeni JF Jr, Hsing AW.

Br J Cancer. 2010 Mar 30;102(7):1185-9. doi: 10.1038/sj.bjc.6605597. Epub 2010 Mar 9.

34.

Polymorphisms of estrogen receptors and risk of biliary tract cancers and gallstones: a population-based study in Shanghai, China.

Park SK, Andreotti G, Rashid A, Chen J, Rosenberg PS, Yu K, Olsen J, Gao YT, Deng J, Sakoda LC, Zhang M, Shen MC, Wang BS, Han TQ, Zhang BH, Yeager M, Chanock SJ, Hsing AW.

Carcinogenesis. 2010 May;31(5):842-6. doi: 10.1093/carcin/bgq038. Epub 2010 Feb 19.

35.

Genetic determinants of serum lipid levels in Chinese subjects: a population-based study in Shanghai, China.

Andreotti G, Menashe I, Chen J, Chang SC, Rashid A, Gao YT, Han TQ, Sakoda LC, Chanock S, Rosenberg PS, Hsing AW.

Eur J Epidemiol. 2009;24(12):763-74. doi: 10.1007/s10654-009-9402-3. Epub 2009 Nov 4.

36.

Variants in hormone-related genes and the risk of biliary tract cancers and stones: a population-based study in China.

Park SK, Andreotti G, Sakoda LC, Gao YT, Rashid A, Chen J, Chen BE, Rosenberg PS, Shen MC, Wang BS, Han TQ, Zhang BH, Yeager M, Chanock S, Hsing AW.

Carcinogenesis. 2009 Apr;30(4):606-14. doi: 10.1093/carcin/bgp024. Epub 2009 Jan 23.

37.

Genetic variation in CYP19A1 and risk of breast cancer and fibrocystic breast conditions among women in Shanghai, China.

Chen C, Sakoda LC, Doherty JA, Loomis MM, Fish S, Ray RM, Lin MG, Fan W, Zhao LP, Gao DL, Stalsberg H, Feng Z, Thomas DB.

Cancer Epidemiol Biomarkers Prev. 2008 Dec;17(12):3457-66. doi: 10.1158/1055-9965.EPI-08-0517.

38.

Body size and the risk of biliary tract cancer: a population-based study in China.

Hsing AW, Sakoda LC, Rashid A, Chen J, Shen MC, Han TQ, Wang BS, Gao YT.

Br J Cancer. 2008 Sep 2;99(5):811-5. doi: 10.1038/sj.bjc.6604616.

39.

Variants of DNA repair genes and the risk of biliary tract cancers and stones: a population-based study in China.

Zhang M, Huang WY, Andreotti G, Gao YT, Rashid A, Chen J, Sakoda LC, Shen MC, Wang BS, Chanock S, Hsing AW.

Cancer Epidemiol Biomarkers Prev. 2008 Aug;17(8):2123-7. doi: 10.1158/1055-9965.EPI-07-2735.

40.

Variants in inflammation genes and the risk of biliary tract cancers and stones: a population-based study in China.

Hsing AW, Sakoda LC, Rashid A, Andreotti G, Chen J, Wang BS, Shen MC, Chen BE, Rosenberg PS, Zhang M, Niwa S, Chu L, Welch R, Yeager M, Fraumeni JF Jr, Gao YT, Chanock SJ.

Cancer Res. 2008 Aug 1;68(15):6442-52. doi: 10.1158/0008-5472.CAN-08-0444.

41.

Incidence of lymphoid neoplasms by subtype among six Asian ethnic groups in the United States, 1996-2004.

Carreon JD, Morton LM, Devesa SS, Clarke CA, Gomez SL, Glaser SL, Sakoda LC, Linet MS, Wang SS.

Cancer Causes Control. 2008 Dec;19(10):1171-81. doi: 10.1007/s10552-008-9184-z. Epub 2008 Jun 10.

42.

Polymorphisms in steroid hormone biosynthesis genes and risk of breast cancer and fibrocystic breast conditions in Chinese women.

Sakoda LC, Blackston C, Doherty JA, Ray RM, Lin MG, Stalsberg H, Gao DL, Feng Z, Thomas DB, Chen C.

Cancer Epidemiol Biomarkers Prev. 2008 May;17(5):1066-73. doi: 10.1158/1055-9965.EPI-07-2680.

43.

Genetic variation in hormone metabolizing genes and risk of testicular germ cell tumors.

Figueroa JD, Sakoda LC, Graubard BI, Chanock S, Rubertone MV, Erickson RL, McGlynn KA.

Cancer Causes Control. 2008 Nov;19(9):917-29. doi: 10.1007/s10552-008-9153-6. Epub 2008 Apr 16.

PMID:
18415690
44.

Polymorphism of genes related to insulin sensitivity and the risk of biliary tract cancer and biliary stone: a population-based case-control study in Shanghai, China.

Chang SC, Rashid A, Gao YT, Andreotti G, Shen MC, Wang BS, Han TQ, Zhang BH, Sakoda LC, Leitzmann MF, Chen BE, Rosenberg PS, Chen J, Chanock SJ, Hsing AW.

Carcinogenesis. 2008 May;29(5):944-8. doi: 10.1093/carcin/bgn025. Epub 2008 Mar 28.

45.

Risk of testicular germ cell tumors and polymorphisms in the insulin-like growth factor genes.

Chia VM, Sakoda LC, Graubard BI, Rubertone MV, Chanock SJ, Erickson RL, McGlynn KA.

Cancer Epidemiol Biomarkers Prev. 2008 Mar;17(3):721-6. doi: 10.1158/1055-9965.EPI-07-0768.

46.

Polymorphisms of genes in the lipid metabolism pathway and risk of biliary tract cancers and stones: a population-based case-control study in Shanghai, China.

Andreotti G, Chen J, Gao YT, Rashid A, Chen BE, Rosenberg P, Sakoda LC, Deng J, Shen MC, Wang BS, Han TQ, Zhang BH, Yeager M, Welch R, Chanock S, Fraumeni JF Jr, Hsing AW.

Cancer Epidemiol Biomarkers Prev. 2008 Mar;17(3):525-34. doi: 10.1158/1055-9965.EPI-07-2704. Epub 2008 Feb 22.

47.

Obesity, metabolic syndrome, and prostate cancer.

Hsing AW, Sakoda LC, Chua S Jr.

Am J Clin Nutr. 2007 Sep;86(3):s843-57. doi: 10.1093/ajcn/86.3.843S. Review.

PMID:
18265478
48.

TNF polymorphisms and prostate cancer risk.

Danforth KN, Rodriguez C, Hayes RB, Sakoda LC, Huang WY, Yu K, Calle EE, Jacobs EJ, Chen BE, Andriole GL, Figueroa JD, Yeager M, Platz EA, Michaud DS, Chanock SJ, Thun MJ, Hsing AW.

Prostate. 2008 Mar 1;68(4):400-7. doi: 10.1002/pros.20694.

PMID:
18196539
49.

Gallstones and the risk of biliary tract cancer: a population-based study in China.

Hsing AW, Gao YT, Han TQ, Rashid A, Sakoda LC, Wang BS, Shen MC, Zhang BH, Niwa S, Chen J, Fraumeni JF Jr.

Br J Cancer. 2007 Dec 3;97(11):1577-82. Epub 2007 Nov 13.

50.

Polymorphic variants in PTGS2 and prostate cancer risk: results from two large nested case-control studies.

Danforth KN, Hayes RB, Rodriguez C, Yu K, Sakoda LC, Huang WY, Chen BE, Chen J, Andriole GL, Calle EE, Jacobs EJ, Chu LW, Figueroa JD, Yeager M, Platz EA, Michaud DS, Chanock SJ, Thun MJ, Hsing AW.

Carcinogenesis. 2008 Mar;29(3):568-72. Epub 2007 Nov 13.

PMID:
17999989

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