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Items: 13

1.

Relationship between intrarenal renin-angiotensin activity and re-hospitalization in patients with heart failure with reduced ejection fraction.

Örsçelik Ö, Özkan B, Arslan A, Şahin EE, Sakarya O, Sürmeli OA, Balcı Fidancı Ş, Çelik A, Çimen BY, Özcan İT.

Anatol J Cardiol. 2018 Mar;19(3):205-212. doi: 10.14744/AnatolJCardiol.2018.68726.

2.

Detection of Prokaryotic Genes in the Amphimedon queenslandica Genome.

Conaco C, Tsoulfas P, Sakarya O, Dolan A, Werren J, Kosik KS.

PLoS One. 2016 Mar 9;11(3):e0151092. doi: 10.1371/journal.pone.0151092. eCollection 2016.

3.

Detection of ubiquitous and heterogeneous mutations in cell-free DNA from patients with early-stage non-small-cell lung cancer.

Jamal-Hanjani M, Wilson GA, Horswell S, Mitter R, Sakarya O, Constantin T, Salari R, Kirkizlar E, Sigurjonsson S, Pelham R, Kareht S, Zimmermann B, Swanton C.

Ann Oncol. 2016 May;27(5):862-7. doi: 10.1093/annonc/mdw037. Epub 2016 Jan 28.

PMID:
26823523
4.

Characterizing the heterogeneity of triple-negative breast cancers using microdissected normal ductal epithelium and RNA-sequencing.

Radovich M, Clare SE, Atale R, Pardo I, Hancock BA, Solzak JP, Kassem N, Mathieson T, Storniolo AM, Rufenbarger C, Lillemoe HA, Blosser RJ, Choi MR, Sauder CA, Doxey D, Henry JE, Hilligoss EE, Sakarya O, Hyland FC, Hickenbotham M, Zhu J, Glasscock J, Badve S, Ivan M, Liu Y, Sledge GW, Schneider BP.

Breast Cancer Res Treat. 2014 Jan;143(1):57-68. doi: 10.1007/s10549-013-2780-y. Epub 2013 Nov 29.

5.

Genome and transcriptome sequencing in prospective metastatic triple-negative breast cancer uncovers therapeutic vulnerabilities.

Craig DW, O'Shaughnessy JA, Kiefer JA, Aldrich J, Sinari S, Moses TM, Wong S, Dinh J, Christoforides A, Blum JL, Aitelli CL, Osborne CR, Izatt T, Kurdoglu A, Baker A, Koeman J, Barbacioru C, Sakarya O, De La Vega FM, Siddiqui A, Hoang L, Billings PR, Salhia B, Tolcher AW, Trent JM, Mousses S, Von Hoff D, Carpten JD.

Mol Cancer Ther. 2013 Jan;12(1):104-16. doi: 10.1158/1535-7163.MCT-12-0781. Epub 2012 Nov 19.

6.

RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.

Sakarya O, Breu H, Radovich M, Chen Y, Wang YN, Barbacioru C, Utiramerur S, Whitley PP, Brockman JP, Vatta P, Zhang Z, Popescu L, Muller MW, Kudlingar V, Garg N, Li CY, Kong BS, Bodeau JP, Nutter RC, Gu J, Bramlett KS, Ichikawa JK, Hyland FC, Siddiqui AS.

PLoS Comput Biol. 2012;8(4):e1002464. doi: 10.1371/journal.pcbi.1002464. Epub 2012 Apr 5.

7.

The ecoresponsive genome of Daphnia pulex.

Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL.

Science. 2011 Feb 4;331(6017):555-61. doi: 10.1126/science.1197761.

8.

Transient bone marrow oedema syndrome: a report of two cases.

Bilgici A, Sakarya S, Bekir Selçuk M, Sakarya O.

Hip Int. 2010 Jul-Sep;20(3):335-7.

PMID:
20640993
9.

Evolutionary expansion and specialization of the PDZ domains.

Sakarya O, Conaco C, Egecioglu O, Solla SA, Oakley TH, Kosik KS.

Mol Biol Evol. 2010 May;27(5):1058-69. doi: 10.1093/molbev/msp311. Epub 2009 Dec 21.

PMID:
20026484
10.

Expression of a poriferan potassium channel: insights into the evolution of ion channels in metazoans.

Tompkins-Macdonald GJ, Gallin WJ, Sakarya O, Degnan B, Leys SP, Boland LM.

J Exp Biol. 2009 Mar;212(Pt 6):761-7. doi: 10.1242/jeb.026971.

11.

Reconstructing ancestral genome content based on symmetrical best alignments and Dollo parsimony.

Sakarya O, Kosik KS, Oakley TH.

Bioinformatics. 2008 Mar 1;24(5):606-12. doi: 10.1093/bioinformatics/btn005. Epub 2008 Jan 9.

PMID:
18184685
12.

A post-synaptic scaffold at the origin of the animal kingdom.

Sakarya O, Armstrong KA, Adamska M, Adamski M, Wang IF, Tidor B, Degnan BM, Oakley TH, Kosik KS.

PLoS One. 2007 Jun 6;2(6):e506.

13.

Kozlowski type spondylometaphyseal dysplasia: a case report with literature review.

Nural MS, Diren HB, Sakarya O, Yalin T, Dağdemir A.

Diagn Interv Radiol. 2006 Jun;12(2):70-3. Review.

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