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Items: 1 to 50 of 424

1.

Co-precipitation molecules hemopexin and transferrin may be key molecules for fibrillogenesis in TTR V30M amyloidogenesis.

Ohta M, Sugano A, Hatano N, Sato H, Shimada H, Niwa H, Sakaeda T, Tei H, Sakaki Y, Yamamura KI, Takaoka Y.

Transgenic Res. 2018 Feb;27(1):15-23. doi: 10.1007/s11248-017-0054-x. Epub 2017 Dec 29.

2.

Melting Process of the Peritectic Mixture of Lidocaine and Ibuprofen Interpreted by Site Percolation Theory Model.

Kataoka H, Sakaki Y, Komatsu K, Shimada Y, Goto S.

J Pharm Sci. 2017 Oct;106(10):3016-3021. doi: 10.1016/j.xphs.2017.04.010. Epub 2017 Apr 15.

PMID:
28419826
3.

Diagnosis and follow-up of posterior inferior cerebellar artery dissection complicated with ischemic stroke assisted by T1-VISTA: a report of two cases.

Ishitsuka K, Sakaki Y, Sakai S, Uwatoko T, Aibe H, Ago T, Kitazono T, Sugimori H.

BMC Neurol. 2016 Jul 29;16:121. doi: 10.1186/s12883-016-0637-9.

4.

Enzymatic synthesis of novel oligosaccharides from N-acetylsucrosamine and melibiose using Aspergillus niger α-galactosidase, and properties of the products.

Sakaki Y, Tashiro M, Katou M, Sakuma C, Hirano T, Hakamata W, Nishio T.

Biosci Biotechnol Biochem. 2016 Sep;80(9):1836-42. doi: 10.1080/09168451.2016.1189316. Epub 2016 Jun 2.

PMID:
27254139
5.

Silent myocardial ischemia in asymptomatic patients with type 2 diabetes mellitus without previous histories of cardiovascular disease.

Kawano Y, Takemoto M, Mito T, Morisaki H, Tanaka A, Sakaki Y, Matsuo A, Abe K, Hida S, Mukae K, Okazaki T, Tayama K, Inoguchi T, Yoshitake K, Kosuga K.

Int J Cardiol. 2016 Aug 1;216:151-5. doi: 10.1016/j.ijcard.2016.04.008. Epub 2016 Apr 11.

PMID:
27155073
6.

Structure-based analysis of domain function of chitin oligosaccharide deacetylase from Vibrio parahaemolyticus.

Hirano T, Sugiyama K, Sakaki Y, Hakamata W, Park SY, Nishio T.

FEBS Lett. 2015 Jan 2;589(1):145-51. doi: 10.1016/j.febslet.2014.11.039. Epub 2014 Dec 3.

7.

Epithelium specific ETS transcription factor, ESE-3, of Protobothrops flavoviridis snake venom gland transactivates the promoters of venom phospholipase A2 isozyme genes.

Nakamura H, Murakami T, Hattori S, Sakaki Y, Ohkuri T, Chijiwa T, Ohno M, Oda-Ueda N.

Toxicon. 2014 Dec 15;92:133-9. doi: 10.1016/j.toxicon.2014.10.001. Epub 2014 Oct 22.

PMID:
25449102
9.

Waveguide-mode interference lithography technique for high contrast subwavelength structures in the visible region.

Kusaka K, Kurosawa H, Ohno S, Sakaki Y, Nakayama K, Moritake Y, Ishihara T.

Opt Express. 2014 Jul 28;22(15):18748-56. doi: 10.1364/OE.22.018748.

PMID:
25089492
10.

Physiological and genetic basis for self-aggregation of a thermophilic hydrogenotrophic methanogen, Methanothermobacter strain CaT2.

Kosaka T, Toh H, Fujiyama A, Sakaki Y, Watanabe K, Meng XY, Hanada S, Toyoda A.

Environ Microbiol Rep. 2014 Jun;6(3):268-77. doi: 10.1111/1758-2229.12128. Epub 2013 Dec 12.

PMID:
24983531
11.

Interleukin-1 receptor gene variants are associated with aggressive periodontitis in the Japanese.

Kamei H, Ishihara Y, Fuma D, Niwa T, Kamiya Y, Yokoi T, Suzuki M, Izawa A, Mizutani H, Hayashi J, Sakaki Y, Noguchi T, Kojima T.

Arch Oral Biol. 2014 Jul;59(7):756-63. doi: 10.1016/j.archoralbio.2014.04.006. Epub 2014 Apr 20.

PMID:
24818754
13.

Maternal high-fat diet induces insulin resistance and deterioration of pancreatic β-cell function in adult offspring with sex differences in mice.

Yokomizo H, Inoguchi T, Sonoda N, Sakaki Y, Maeda Y, Inoue T, Hirata E, Takei R, Ikeda N, Fujii M, Fukuda K, Sasaki H, Takayanagi R.

Am J Physiol Endocrinol Metab. 2014 May 15;306(10):E1163-75. doi: 10.1152/ajpendo.00688.2013. Epub 2014 Apr 1.

14.

Leptin receptor-deficient (knockout) medaka, Oryzias latipes, show chronical up-regulated levels of orexigenic neuropeptides, elevated food intake and stage specific effects on growth and fat allocation.

Chisada SI, Kurokawa T, Murashita K, Rønnestad I, Taniguchi Y, Toyoda A, Sakaki Y, Takeda S, Yoshiura Y.

Gen Comp Endocrinol. 2013 Oct 25. pii: S0016-6480(13)00420-6. doi: 10.1016/j.ygcen.2013.10.008. [Epub ahead of print]

PMID:
24512942
15.

Leptin receptor-deficient (knockout) medaka, Oryzias latipes, show chronical up-regulated levels of orexigenic neuropeptides, elevated food intake and stage specific effects on growth and fat allocation.

Chisada S, Kurokawa T, Murashita K, Rønnestad I, Taniguchi Y, Toyoda A, Sakaki Y, Takeda S, Yoshiura Y.

Gen Comp Endocrinol. 2014 Jan 1;195:9-20.

PMID:
24505600
16.

[Conceptual systems in bilinguals: evidence from category clustering].

Sakaki Y, Hakoda Y.

Shinrigaku Kenkyu. 2013 Oct;84(4):396-407. Japanese.

PMID:
24205742
17.

Effects of different movement directions on electromyography recorded from the shoulder muscles while passing the target positions.

Sakaki Y, Kaneko F, Watanabe K, Kobayashi T, Katayose M, Aoki N, Shibata E, Yamashita T.

J Electromyogr Kinesiol. 2013 Dec;23(6):1362-9. doi: 10.1016/j.jelekin.2013.08.010. Epub 2013 Sep 13.

PMID:
24113424
18.

Identification of an imprinted gene cluster in the X-inactivation center.

Kobayashi S, Totoki Y, Soma M, Matsumoto K, Fujihara Y, Toyoda A, Sakaki Y, Okabe M, Ishino F.

PLoS One. 2013 Aug 6;8(8):e71222. doi: 10.1371/journal.pone.0071222. Print 2013.

19.

Novel bioresources for studies of Brassica oleracea: identification of a kale MYB transcription factor responsible for glucosinolate production.

Araki R, Hasumi A, Nishizawa OI, Sasaki K, Kuwahara A, Sawada Y, Totoki Y, Toyoda A, Sakaki Y, Li Y, Saito K, Ogawa T, Hirai MY.

Plant Biotechnol J. 2013 Oct;11(8):1017-27. doi: 10.1111/pbi.12095. Epub 2013 Jul 30.

20.

The ancestor of extant Japanese fancy mice contributed to the mosaic genomes of classical inbred strains.

Takada T, Ebata T, Noguchi H, Keane TM, Adams DJ, Narita T, Shin-I T, Fujisawa H, Toyoda A, Abe K, Obata Y, Sakaki Y, Moriwaki K, Fujiyama A, Kohara Y, Shiroishi T.

Genome Res. 2013 Aug;23(8):1329-38. doi: 10.1101/gr.156497.113. Epub 2013 Apr 19.

21.

Development and characterization of cDNA resources for the common marmoset: one of the experimental primate models.

Tatsumoto S, Adati N, Tohtoki Y, Sakaki Y, Boroviak T, Habu S, Okano H, Suemizu H, Sasaki E, Satake M.

DNA Res. 2013 Jun;20(3):255-62. doi: 10.1093/dnares/dst007. Epub 2013 Mar 29.

22.

Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones.

Yamazaki M, Mochida K, Asano T, Nakabayashi R, Chiba M, Udomson N, Yamazaki Y, Goodenowe DB, Sankawa U, Yoshida T, Toyoda A, Totoki Y, Sakaki Y, Góngora-Castillo E, Buell CR, Sakurai T, Saito K.

Plant Cell Physiol. 2013 May;54(5):686-96. doi: 10.1093/pcp/pct040. Epub 2013 Mar 15.

23.

ATP13A2 deficiency induces a decrease in cathepsin D activity, fingerprint-like inclusion body formation, and selective degeneration of dopaminergic neurons.

Matsui H, Sato F, Sato S, Koike M, Taruno Y, Saiki S, Funayama M, Ito H, Taniguchi Y, Uemura N, Toyoda A, Sakaki Y, Takeda S, Uchiyama Y, Hattori N, Takahashi R.

FEBS Lett. 2013 May 2;587(9):1316-25. doi: 10.1016/j.febslet.2013.02.046. Epub 2013 Mar 13.

24.

ATF6α/β-mediated adjustment of ER chaperone levels is essential for development of the notochord in medaka fish.

Ishikawa T, Okada T, Ishikawa-Fujiwara T, Todo T, Kamei Y, Shigenobu S, Tanaka M, Saito TL, Yoshimura J, Morishita S, Toyoda A, Sakaki Y, Taniguchi Y, Takeda S, Mori K.

Mol Biol Cell. 2013 May;24(9):1387-95. doi: 10.1091/mbc.E12-11-0830. Epub 2013 Feb 27.

25.

Establishment and characterization of Roberts syndrome and SC phocomelia model medaka (Oryzias latipes).

Morita A, Nakahira K, Hasegawa T, Uchida K, Taniguchi Y, Takeda S, Toyoda A, Sakaki Y, Shimada A, Takeda H, Yanagihara I.

Dev Growth Differ. 2012 Jun;54(5):588-604. doi: 10.1111/j.1440-169X.2012.01362.x.

PMID:
22694322
26.

Myostatin-deficient medaka exhibit a double-muscling phenotype with hyperplasia and hypertrophy, which occur sequentially during post-hatch development.

Chisada S, Okamoto H, Taniguchi Y, Kimori Y, Toyoda A, Sakaki Y, Takeda S, Yoshiura Y.

Dev Biol. 2011 Nov 1;359(1):82-94. doi: 10.1016/j.ydbio.2011.08.027. Epub 2011 Sep 7.

27.

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development.

Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ES, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, Zenger KR, Wang C, Ferguson-Smith M, Nicholas FW, Hickford D, Yu H, Short KR, Siddle HV, Frankenberg SR, Chew KY, Menzies BR, Stringer JM, Suzuki S, Hore TA, Delbridge ML, Patel HR, Mohammadi A, Schneider NY, Hu Y, O'Hara W, Al Nadaf S, Wu C, Feng ZP, Cocks BG, Wang J, Flicek P, Searle SM, Fairley S, Beal K, Herrero J, Carone DM, Suzuki Y, Sugano S, Toyoda A, Sakaki Y, Kondo S, Nishida Y, Tatsumoto S, Mandiou I, Hsu A, McColl KA, Lansdell B, Weinstock G, Kuczek E, McGrath A, Wilson P, Men A, Hazar-Rethinam M, Hall A, Davis J, Wood D, Williams S, Sundaravadanam Y, Muzny DM, Jhangiani SN, Lewis LR, Morgan MB, Okwuonu GO, Ruiz SJ, Santibanez J, Nazareth L, Cree A, Fowler G, Kovar CL, Dinh HH, Joshi V, Jing C, Lara F, Thornton R, Chen L, Deng J, Liu Y, Shen JY, Song XZ, Edson J, Troon C, Thomas D, Stephens A, Yapa L, Levchenko T, Gibbs RA, Cooper DW, Speed TP, Fujiyama A, Graves JA, O'Neill RJ, Pask AJ, Forrest SM, Worley KC.

Genome Biol. 2011 Aug 29;12(8):R81. doi: 10.1186/gb-2011-12-8-r81. Erratum in: Genome Biol. 2011;12(12):414. Patel, Hardip R [added].

28.

Reveromycin A biosynthesis uses RevG and RevJ for stereospecific spiroacetal formation.

Takahashi S, Toyoda A, Sekiyama Y, Takagi H, Nogawa T, Uramoto M, Suzuki R, Koshino H, Kumano T, Panthee S, Dairi T, Ishikawa J, Ikeda H, Sakaki Y, Osada H.

Nat Chem Biol. 2011 Jun 5;7(7):461-8. doi: 10.1038/nchembio.583.

PMID:
21642985
29.

Active role of small non-coding RNAs derived from SINE/B1 retrotransposon during early mouse development.

Ohnishi Y, Totoki Y, Toyoda A, Watanabe T, Yamamoto Y, Tokunaga K, Sakaki Y, Sasaki H, Hohjoh H.

Mol Biol Rep. 2012 Feb;39(2):903-9. doi: 10.1007/s11033-011-0815-1. Epub 2011 May 13.

PMID:
21567196
30.

Refined human artificial chromosome vectors for gene therapy and animal transgenesis.

Kazuki Y, Hoshiya H, Takiguchi M, Abe S, Iida Y, Osaki M, Katoh M, Hiratsuka M, Shirayoshi Y, Hiramatsu K, Ueno E, Kajitani N, Yoshino T, Kazuki K, Ishihara C, Takehara S, Tsuji S, Ejima F, Toyoda A, Sakaki Y, Larionov V, Kouprina N, Oshimura M.

Gene Ther. 2011 Apr;18(4):384-93. doi: 10.1038/gt.2010.147. Epub 2010 Nov 18.

31.

Small RNA class transition from siRNA/piRNA to miRNA during pre-implantation mouse development.

Ohnishi Y, Totoki Y, Toyoda A, Watanabe T, Yamamoto Y, Tokunaga K, Sakaki Y, Sasaki H, Hohjoh H.

Nucleic Acids Res. 2010 Aug;38(15):5141-51. doi: 10.1093/nar/gkq229. Epub 2010 Apr 12.

32.

Biochemical characterization of a novel indole prenyltransferase from Streptomyces sp. SN-593.

Takahashi S, Takagi H, Toyoda A, Uramoto M, Nogawa T, Ueki M, Sakaki Y, Osada H.

J Bacteriol. 2010 Jun;192(11):2839-51. doi: 10.1128/JB.01557-09. Epub 2010 Mar 26.

33.

Mapping human genetic diversity in Asia.

HUGO Pan-Asian SNP Consortium, Abdulla MA, Ahmed I, Assawamakin A, Bhak J, Brahmachari SK, Calacal GC, Chaurasia A, Chen CH, Chen J, Chen YT, Chu J, Cutiongco-de la Paz EM, De Ungria MC, Delfin FC, Edo J, Fuchareon S, Ghang H, Gojobori T, Han J, Ho SF, Hoh BP, Huang W, Inoko H, Jha P, Jinam TA, Jin L, Jung J, Kangwanpong D, Kampuansai J, Kennedy GC, Khurana P, Kim HL, Kim K, Kim S, Kim WY, Kimm K, Kimura R, Koike T, Kulawonganunchai S, Kumar V, Lai PS, Lee JY, Lee S, Liu ET, Majumder PP, Mandapati KK, Marzuki S, Mitchell W, Mukerji M, Naritomi K, Ngamphiw C, Niikawa N, Nishida N, Oh B, Oh S, Ohashi J, Oka A, Ong R, Padilla CD, Palittapongarnpim P, Perdigon HB, Phipps ME, Png E, Sakaki Y, Salvador JM, Sandraling Y, Scaria V, Seielstad M, Sidek MR, Sinha A, Srikummool M, Sudoyo H, Sugano S, Suryadi H, Suzuki Y, Tabbada KA, Tan A, Tokunaga K, Tongsima S, Villamor LP, Wang E, Wang Y, Wang H, Wu JY, Xiao H, Xu S, Yang JO, Shugart YY, Yoo HS, Yuan W, Zhao G, Zilfalil BA; Indian Genome Variation Consortium.

Science. 2009 Dec 11;326(5959):1541-5. doi: 10.1126/science.1177074.

34.

Ligand-specific sequential regulation of transcription factors for differentiation of MCF-7 cells.

Saeki Y, Endo T, Ide K, Nagashima T, Yumoto N, Toyoda T, Suzuki H, Hayashizaki Y, Sakaki Y, Okada-Hatakeyama M.

BMC Genomics. 2009 Nov 20;10:545. doi: 10.1186/1471-2164-10-545.

35.

Loss of PINK1 in medaka fish (Oryzias latipes) causes late-onset decrease in spontaneous movement.

Matsui H, Taniguchi Y, Inoue H, Kobayashi Y, Sakaki Y, Toyoda A, Uemura K, Kobayashi D, Takeda S, Takahashi R.

Neurosci Res. 2010 Feb;66(2):151-61. doi: 10.1016/j.neures.2009.10.010. Epub 2009 Nov 4.

PMID:
19895857
36.

CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock.

Isojima Y, Nakajima M, Ukai H, Fujishima H, Yamada RG, Masumoto KH, Kiuchi R, Ishida M, Ukai-Tadenuma M, Minami Y, Kito R, Nakao K, Kishimoto W, Yoo SH, Shimomura K, Takao T, Takano A, Kojima T, Nagai K, Sakaki Y, Takahashi JS, Ueda HR.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15744-9. doi: 10.1073/pnas.0908733106. Epub 2009 Sep 2.

37.

The identification and functional implications of human-specific "fixed" amino acid substitutions in the glutamate receptor family.

Goto H, Watanabe K, Araragi N, Kageyama R, Tanaka K, Kuroki Y, Toyoda A, Hattori M, Sakaki Y, Fujiyama A, Fukumaki Y, Shibata H.

BMC Evol Biol. 2009 Sep 8;9:224. doi: 10.1186/1471-2148-9-224.

38.

Assessment of adaptive evolution between wheat and rice as deduced from full-length common wheat cDNA sequence data and expression patterns.

Kawaura K, Mochida K, Enju A, Totoki Y, Toyoda A, Sakaki Y, Kai C, Kawai J, Hayashizaki Y, Seki M, Shinozaki K, Ogihara Y.

BMC Genomics. 2009 Jun 18;10:271. doi: 10.1186/1471-2164-10-271.

39.

Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs.

Iida K, Fukami-Kobayashi K, Toyoda A, Sakaki Y, Kobayashi M, Seki M, Shinozaki K.

DNA Res. 2009 Jun;16(3):155-64. doi: 10.1093/dnares/dsp009. Epub 2009 May 7.

40.

Ontogeny of circadian organization in the rat.

Yamazaki S, Yoshikawa T, Biscoe EW, Numano R, Gallaspy LM, Soulsby S, Papadimas E, Pezuk P, Doyle SE, Tei H, Sakaki Y, Block GD, Menaker M.

J Biol Rhythms. 2009 Feb;24(1):55-63. doi: 10.1177/0748730408328438.

41.

Amyloid precursor protein is a primary androgen target gene that promotes prostate cancer growth.

Takayama K, Tsutsumi S, Suzuki T, Horie-Inoue K, Ikeda K, Kaneshiro K, Fujimura T, Kumagai J, Urano T, Sakaki Y, Shirahige K, Sasano H, Takahashi S, Kitamura T, Ouchi Y, Aburatani H, Inoue S.

Cancer Res. 2009 Jan 1;69(1):137-42. doi: 10.1158/0008-5472.CAN-08-3633.

42.

Differences in serum phospholipid fatty acid compositions and estimated desaturase activities between Japanese men with and without metabolic syndrome.

Maruyama C, Yoneyama M, Suyama N, Yoshimi K, Teramoto A, Sakaki Y, Suto Y, Takahashi K, Araki R, Ishizaka Y, Yamakado M, Teramoto T.

J Atheroscler Thromb. 2008 Dec;15(6):306-13. Epub 2008 Dec 6.

43.

Absolute quantification of the budding yeast transcriptome by means of competitive PCR between genomic and complementary DNAs.

Miura F, Kawaguchi N, Yoshida M, Uematsu C, Kito K, Sakaki Y, Ito T.

BMC Genomics. 2008 Nov 29;9:574. doi: 10.1186/1471-2164-9-574.

44.

Large-scale microfabricated channel plates for high-throughput, fully automated DNA sequencing.

Kumagai H, Utsunomiya S, Nakamura S, Yamamoto R, Harada A, Kaji T, Hazama M, Ohashi T, Inami A, Ikegami T, Miyamoto K, Endo N, Yoshimi K, Toyoda A, Hattori M, Sakaki Y.

Electrophoresis. 2008 Dec;29(23):4723-32. doi: 10.1002/elps.200800301.

PMID:
19016243
45.

Identification and characterization of new long conserved noncoding sequences in vertebrates.

Sakuraba Y, Kimura T, Masuya H, Noguchi H, Sezutsu H, Takahasi KR, Toyoda A, Fukumura R, Murata T, Sakaki Y, Yamamura M, Wakana S, Noda T, Shiroishi T, Gondo Y.

Mamm Genome. 2008 Oct-Dec;19(10-12):703-12. doi: 10.1007/s00335-008-9152-7. Epub 2008 Nov 18.

PMID:
19015917
46.

Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila.

Taji T, Sakurai T, Mochida K, Ishiwata A, Kurotani A, Totoki Y, Toyoda A, Sakaki Y, Seki M, Ono H, Sakata Y, Tanaka S, Shinozaki K.

BMC Plant Biol. 2008 Nov 12;8:115. doi: 10.1186/1471-2229-8-115.

47.

Genome of an endosymbiont coupling N2 fixation to cellulolysis within protist cells in termite gut.

Hongoh Y, Sharma VK, Prakash T, Noda S, Toh H, Taylor TD, Kudo T, Sakaki Y, Toyoda A, Hattori M, Ohkuma M.

Science. 2008 Nov 14;322(5904):1108-9. doi: 10.1126/science.1165578.

49.

Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library.

Umezawa T, Sakurai T, Totoki Y, Toyoda A, Seki M, Ishiwata A, Akiyama K, Kurotani A, Yoshida T, Mochida K, Kasuga M, Todaka D, Maruyama K, Nakashima K, Enju A, Mizukado S, Ahmed S, Yoshiwara K, Harada K, Tsubokura Y, Hayashi M, Sato S, Anai T, Ishimoto M, Funatsuki H, Teraishi M, Osaki M, Shinano T, Akashi R, Sakaki Y, Yamaguchi-Shinozaki K, Shinozaki K.

DNA Res. 2008 Dec;15(6):333-46. doi: 10.1093/dnares/dsn024. Epub 2008 Oct 16.

50.

Phosphoproteome and transcriptome analyses of ErbB ligand-stimulated MCF-7 cells.

Nagashima T, Oyama M, Kozuka-Hata H, Yumoto N, Sakaki Y, Hatakeyama M.

Cancer Genomics Proteomics. 2008 May-Aug;5(3-4):161-8.

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