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Items: 25

1.

Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar.

Clifton-Brown J, Harfouche A, Casler MD, Dylan Jones H, Macalpine WJ, Murphy-Bokern D, Smart LB, Adler A, Ashman C, Awty-Carroll D, Bastien C, Bopper S, Botnari V, Brancourt-Hulmel M, Chen Z, Clark LV, Cosentino S, Dalton S, Davey C, Dolstra O, Donnison I, Flavell R, Greef J, Hanley S, Hastings A, Hertzberg M, Hsu TW, Huang LS, Iurato A, Jensen E, Jin X, Jørgensen U, Kiesel A, Kim DS, Liu J, McCalmont JP, McMahon BG, Mos M, Robson P, Sacks EJ, Sandu A, Scalici G, Schwarz K, Scordia D, Shafiei R, Shield I, Slavov G, Stanton BJ, Swaminathan K, Taylor G, Torres AF, Trindade LM, Tschaplinski T, Tuskan GA, Yamada T, Yeon Yu C, Zalesny RS Jr, Zong J, Lewandowski I.

Glob Change Biol Bioenergy. 2019 Jan;11(1):118-151. doi: 10.1111/gcbb.12566. Epub 2018 Oct 23.

2.

polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids.

Clark LV, Lipka AE, Sacks EJ.

G3 (Bethesda). 2019 Mar 7;9(3):663-673. doi: 10.1534/g3.118.200913.

3.

Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. sinensis, and diversity centred around the Yellow Sea.

Clark LV, Jin X, Petersen KK, Anzoua KG, Bagmet L, Chebukin P, Deuter M, Dzyubenko E, Dzyubenko N, Heo K, Johnson DA, Jørgensen U, Kjeldsen JB, Nagano H, Peng J, Sabitov A, Yamada T, Yoo JH, Yu CY, Long SP, Sacks EJ.

Ann Bot. 2018 Sep 20. doi: 10.1093/aob/mcy161. [Epub ahead of print]

PMID:
30247525
4.

Determination of hemicellulose, cellulose and lignin content using visible and near infrared spectroscopy in Miscanthus sinensis.

Jin X, Chen X, Shi C, Li M, Guan Y, Yu CY, Yamada T, Sacks EJ, Peng J.

Bioresour Technol. 2017 Oct;241:603-609. doi: 10.1016/j.biortech.2017.05.047. Epub 2017 May 10.

PMID:
28601778
5.

Determination of Leaf Water Content by Visible and Near-Infrared Spectrometry and Multivariate Calibration in Miscanthus.

Jin X, Shi C, Yu CY, Yamada T, Sacks EJ.

Front Plant Sci. 2017 May 19;8:721. doi: 10.3389/fpls.2017.00721. eCollection 2017.

6.

Application of visible and near-infrared spectroscopy to classification of Miscanthus species.

Jin X, Chen X, Xiao L, Shi C, Chen L, Yu B, Yi Z, Yoo JH, Heo K, Yu CY, Yamada T, Sacks EJ, Peng J.

PLoS One. 2017 Apr 3;12(4):e0171360. doi: 10.1371/journal.pone.0171360. eCollection 2017.

7.

Ecological characteristics and in situ genetic associations for yield-component traits of wild Miscanthus from eastern Russia.

Clark LV, Dzyubenko E, Dzyubenko N, Bagmet L, Sabitov A, Chebukin P, Johnson DA, Kjeldsen JB, Petersen KK, Jørgensen U, Yoo JH, Heo K, Yu CY, Zhao H, Jin X, Peng J, Yamada T, Sacks EJ.

Ann Bot. 2016 Jul 24. pii: mcw137. [Epub ahead of print]

8.

TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data.

Clark LV, Sacks EJ.

Source Code Biol Med. 2016 Jul 11;11:11. doi: 10.1186/s13029-016-0057-7. eCollection 2016.

9.

Contrasting allelic distribution of CO/Hd1 homologues in Miscanthus sinensis from the East Asian mainland and the Japanese archipelago.

Nagano H, Clark LV, Zhao H, Peng J, Yoo JH, Heo K, Yu CY, Anzoua KG, Matsuo T, Sacks EJ, Yamada T.

J Exp Bot. 2015 Jul;66(14):4227-37. doi: 10.1093/jxb/erv292. Epub 2015 Jun 18.

10.

Can the exceptional chilling tolerance of C4 photosynthesis found in Miscanthus × giganteus be exceeded? Screening of a novel Miscanthus Japanese germplasm collection.

Głowacka K, Jørgensen U, Kjeldsen JB, Kørup K, Spitz I, Sacks EJ, Long SP.

Ann Bot. 2015 May;115(6):981-90. doi: 10.1093/aob/mcv035. Epub 2015 Apr 7.

11.

Genetic structure of Miscanthus sinensis and Miscanthus sacchariflorus in Japan indicates a gradient of bidirectional but asymmetric introgression.

Clark LV, Stewart JR, Nishiwaki A, Toma Y, Kjeldsen JB, Jørgensen U, Zhao H, Peng J, Yoo JH, Heo K, Yu CY, Yamada T, Sacks EJ.

J Exp Bot. 2015 Jul;66(14):4213-25. doi: 10.1093/jxb/eru511. Epub 2015 Jan 24.

12.

Variation in chilling tolerance for photosynthesis and leaf extension growth among genotypes related to the C4 grass Miscanthus ×giganteus.

Głowacka K, Adhikari S, Peng J, Gifford J, Juvik JA, Long SP, Sacks EJ.

J Exp Bot. 2014 Oct;65(18):5267-78. doi: 10.1093/jxb/eru287. Epub 2014 Jul 19.

13.

A footprint of past climate change on the diversity and population structure of Miscanthus sinensis.

Clark LV, Brummer JE, Głowacka K, Hall MC, Heo K, Peng J, Yamada T, Yoo JH, Yu CY, Zhao H, Long SP, Sacks EJ.

Ann Bot. 2014 Jul;114(1):97-107. doi: 10.1093/aob/mcu084. Epub 2014 Jun 10.

14.

Antisense-overexpression of the MsCOMT gene induces changes in lignin and total phenol contents in transgenic tobacco plants.

Seong ES, Yoo JH, Lee JG, Kim HY, Hwang IS, Heo K, Kim JK, Lim JD, Sacks EJ, Yu CY.

Mol Biol Rep. 2013 Feb;40(2):1979-86. doi: 10.1007/s11033-012-2255-y. Epub 2012 Nov 16.

PMID:
23160900
15.

SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum.

Kim C, Zhang D, Auckland SA, Rainville LK, Jakob K, Kronmiller B, Sacks EJ, Deuter M, Paterson AH.

Theor Appl Genet. 2012 May;124(7):1325-38. doi: 10.1007/s00122-012-1790-1. Epub 2012 Jan 25.

PMID:
22274765
16.

Agriculture. Increased food and ecosystem security via perennial grains.

Glover JD, Reganold JP, Bell LW, Borevitz J, Brummer EC, Buckler ES, Cox CM, Cox TS, Crews TE, Culman SW, DeHaan LR, Eriksson D, Gill BS, Holland J, Hu F, Hulke BS, Ibrahim AM, Jackson W, Jones SS, Murray SC, Paterson AH, Ploschuk E, Sacks EJ, Snapp S, Tao D, Van Tassel DL, Wade LJ, Wyse DL, Xu Y.

Science. 2010 Jun 25;328(5986):1638-9. doi: 10.1126/science.1188761. No abstract available.

PMID:
20576874
17.

Identification and genomic location of a reniform nematode (Rotylenchulus reniformis) resistance locus (Ren ari) introgressed from Gossypium aridum into upland cotton (G. hirsutum).

Romano GB, Sacks EJ, Stetina SR, Robinson AF, Fang DD, Gutierrez OA, Scheffler JA.

Theor Appl Genet. 2009 Dec;120(1):139-50. doi: 10.1007/s00122-009-1165-4. Epub 2009 Oct 14.

18.

Resistance in Lycopersicon esculentum Intraspecific Crosses to Race T1 Strains of Xanthomonas campestris pv. vesicatoria Causing Bacterial Spot of Tomato.

Yang W, Sacks EJ, Lewis Ivey ML, Miller SA, Francis DM.

Phytopathology. 2005 May;95(5):519-27. doi: 10.1094/PHYTO-95-0519.

19.

First Report of Endophytic Candida ipomoeae Isolated from Ovules of Upland Cotton in Mississippi.

Sacks EJ, Abbas HK, Mengistu A.

Plant Dis. 2006 Oct;90(10):1362. doi: 10.1094/PD-90-1362B.

PMID:
30780959
20.

Evaluation of an aviator with chronic disequilibrium, oscillopsia, and central sleep apnea.

De Voll JR, Sacks EJ.

Aviat Space Environ Med. 1994 Mar;65(3):263-6.

PMID:
8185560
21.
22.

Ectopic automatic atrial tachycardia in children: clinical characteristics, management and follow-up.

Mehta AV, Sanchez GR, Sacks EJ, Casta A, Dunn JM, Donner RM.

J Am Coll Cardiol. 1988 Feb;11(2):379-85.

23.

Medical barofunction testing of aviators with otorhinolaryngologic disease.

Emery JC, Furry DE, Sacks EJ, Kapadia AS, Smolensky MH.

Aviat Space Environ Med. 1979 Oct;50(10):1062-6.

PMID:
518451
24.

Pulmonary venoocclusive disease: case report and review of the literature.

Shackelford GD, Sacks EJ, Mullins JD, McAlister WH.

AJR Am J Roentgenol. 1977 Apr;128(4):643-8.

PMID:
403796
25.

Cardiovascular responses to hypoxemia and acidemia in fetal lambs.

Cohn HE, Sacks EJ, Heymann MA, Rudolph AM.

Am J Obstet Gynecol. 1974 Nov 15;120(6):817-24. No abstract available.

PMID:
4429091

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