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Items: 39

1.

Covalent Modification of Amino Acids and Peptides Induced by Ionizing Radiation from an Electron Beam Linear Accelerator Used in Radiotherapy.

Minkoff BB, Bruckbauer ST, Sabat G, Cox MM, Sussman MR.

Radiat Res. 2019 May;191(5):447-459. doi: 10.1667/RR15288.1. Epub 2019 Mar 8.

PMID:
30849023
2.

The Foliar Endophyte Phialocephala scopiformis DAOMC 229536 Proteome When Grown on Wood Used as the Sole Carbon Source.

Bhatnagar JM, Sabat G, Cullen D.

Microbiol Resour Announc. 2019 Feb 7;8(6). pii: e01280-18. doi: 10.1128/MRA.01280-18. eCollection 2019 Feb.

3.

Proteomic Analysis of Biomphalaria glabrata Hemocytes During in vitro Encapsulation of Schistosoma mansoni Sporocysts.

Dinguirard N, Cavalcanti MGS, Wu XJ, Bickham-Wright U, Sabat G, Yoshino TP.

Front Immunol. 2018 Nov 29;9:2773. doi: 10.3389/fimmu.2018.02773. eCollection 2018.

4.

In vivo cross-linking supports a head-to-tail mechanism for regulation of the plant plasma membrane P-type H+-ATPase.

Nguyen TT, Sabat G, Sussman MR.

J Biol Chem. 2018 Nov 2;293(44):17095-17106. doi: 10.1074/jbc.RA118.003528. Epub 2018 Sep 14.

5.

Multi-omic Analyses of Extensively Decayed Pinus contorta Reveal Expression of a Diverse Array of Lignocellulose-Degrading Enzymes.

Hori C, Gaskell J, Cullen D, Sabat G, Stewart PE, Lail K, Peng Y, Barry K, Grigoriev IV, Kohler A, Fauchery L, Martin F, Zeiner CA, Bhatnagar JM.

Appl Environ Microbiol. 2018 Oct 1;84(20). pii: e01133-18. doi: 10.1128/AEM.01133-18. Print 2018 Oct 15.

6.

A tail of two voltages: Proteomic comparison of the three electric organs of the electric eel.

Traeger LL, Sabat G, Barrett-Wilt GA, Wells GB, Sussman MR.

Sci Adv. 2017 Jul 5;3(7):e1700523. doi: 10.1126/sciadv.1700523. eCollection 2017 Jul.

7.

Proteomic analysis of Biomphalaria glabrata plasma proteins with binding affinity to those expressed by early developing larval Schistosoma mansoni.

Wu XJ, Dinguirard N, Sabat G, Lui HD, Gonzalez L, Gehring M, Bickham-Wright U, Yoshino TP.

PLoS Pathog. 2017 May 16;13(5):e1006081. doi: 10.1371/journal.ppat.1006081. eCollection 2017 May.

8.

Transcriptome and Secretome Analyses of the Wood Decay Fungus Wolfiporia cocos Support Alternative Mechanisms of Lignocellulose Conversion.

Gaskell J, Blanchette RA, Stewart PE, BonDurant SS, Adams M, Sabat G, Kersten P, Cullen D.

Appl Environ Microbiol. 2016 Jun 13;82(13):3979-3987. doi: 10.1128/AEM.00639-16. Print 2016 Jul 1.

9.

Fluorescent CSC models evidence that targeted nanomedicines improve treatment sensitivity of breast and colon cancer stem cells.

Gener P, Gouveia LP, Sabat GR, de Sousa Rafael DF, Fort NB, Arranja A, Fernández Y, Prieto RM, Ortega JS, Arango D, Abasolo I, Videira M, Schwartz S Jr.

Nanomedicine. 2015 Nov;11(8):1883-92. doi: 10.1016/j.nano.2015.07.009. Epub 2015 Jul 31.

PMID:
26238079
10.

Expression platforms for producing eukaryotic proteins: a comparison of E. coli cell-based and wheat germ cell-free synthesis, affinity and solubility tags, and cloning strategies.

Aceti DJ, Bingman CA, Wrobel RL, Frederick RO, Makino S, Nichols KW, Sahu SC, Bergeman LF, Blommel PG, Cornilescu CC, Gromek KA, Seder KD, Hwang S, Primm JG, Sabat G, Vojtik FC, Volkman BF, Zolnai Z, Phillips GN Jr, Markley JL, Fox BG.

J Struct Funct Genomics. 2015 Jun;16(2):67-80. doi: 10.1007/s10969-015-9198-1. Epub 2015 Apr 9.

11.

A RecA protein surface required for activation of DNA polymerase V.

Gruber AJ, Erdem AL, Sabat G, Karata K, Jaszczur MM, Vo DD, Olsen TM, Woodgate R, Goodman MF, Cox MM.

PLoS Genet. 2015 Mar 26;11(3):e1005066. doi: 10.1371/journal.pgen.1005066. eCollection 2015 Mar.

12.

Hippocampal increase of 5-hmC in the glucocorticoid receptor gene following acute stress.

Li S, Papale LA, Kintner DB, Sabat G, Barrett-Wilt GA, Cengiz P, Alisch RS.

Behav Brain Res. 2015 Jun 1;286:236-240. doi: 10.1016/j.bbr.2015.03.002. Epub 2015 Mar 6.

13.

Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood.

Hori C, Ishida T, Igarashi K, Samejima M, Suzuki H, Master E, Ferreira P, Ruiz-Dueñas FJ, Held B, Canessa P, Larrondo LF, Schmoll M, Druzhinina IS, Kubicek CP, Gaskell JA, Kersten P, St John F, Glasner J, Sabat G, Splinter BonDurant S, Syed K, Yadav J, Mgbeahuruike AC, Kovalchuk A, Asiegbu FO, Lackner G, Hoffmeister D, Rencoret J, Gutiérrez A, Sun H, Lindquist E, Barry K, Riley R, Grigoriev IV, Henrissat B, Kües U, Berka RM, Martínez AT, Covert SF, Blanchette RA, Cullen D.

PLoS Genet. 2014 Dec 4;10(12):e1004759. doi: 10.1371/journal.pgen.1004759. eCollection 2014 Dec.

14.

Influence of Populus genotype on gene expression by the wood decay fungus Phanerochaete chrysosporium.

Gaskell J, Marty A, Mozuch M, Kersten PJ, Splinter BonDurant S, Sabat G, Azarpira A, Ralph J, Skyba O, Mansfield SD, Blanchette RA, Cullen D.

Appl Environ Microbiol. 2014 Sep;80(18):5828-35. doi: 10.1128/AEM.01604-14. Epub 2014 Jul 11.

15.

Disrupting KATP channels diminishes the estrogen-mediated protection in female mutant mice during ischemia-reperfusion.

Gao J, Xu D, Sabat G, Valdivia H, Xu W, Shi NQ.

Clin Proteomics. 2014 May 6;11(1):19. doi: 10.1186/1559-0275-11-19. eCollection 2014.

16.

Novel downstream molecular targets of SIRT1 in melanoma: a quantitative proteomics approach.

Singh CK, George J, Nihal M, Sabat G, Kumar R, Ahmad N.

Oncotarget. 2014 Apr 15;5(7):1987-99.

17.

A peptide hormone and its receptor protein kinase regulate plant cell expansion.

Haruta M, Sabat G, Stecker K, Minkoff BB, Sussman MR.

Science. 2014 Jan 24;343(6169):408-11. doi: 10.1126/science.1244454.

18.

Expression of a translationally fused TAP-tagged plasma membrane proton pump in Arabidopsis thaliana.

Rodrigues RB, Sabat G, Minkoff BB, Burch HL, Nguyen TT, Sussman MR.

Biochemistry. 2014 Jan 28;53(3):566-78. doi: 10.1021/bi401096m. Epub 2014 Jan 15.

19.

Mutations in FLS2 Ser-938 dissect signaling activation in FLS2-mediated Arabidopsis immunity.

Cao Y, Aceti DJ, Sabat G, Song J, Makino S, Fox BG, Bent AF.

PLoS Pathog. 2013;9(4):e1003313. doi: 10.1371/journal.ppat.1003313. Epub 2013 Apr 18.

20.

Identification of ATP synthase as a lipid peroxide protein adduct in pancreatic islets from humans with and without type 2 diabetes mellitus.

MacDonald MJ, Langberg EC, Tibell A, Sabat G, Kendrick MA, Szweda LI, Ostenson CG.

J Clin Endocrinol Metab. 2013 Apr;98(4):E727-31. doi: 10.1210/jc.2012-4203. Epub 2013 Mar 5.

21.

Mass spectrometry compatible surfactant for optimized in-gel protein digestion.

Saveliev SV, Woodroofe CC, Sabat G, Adams CM, Klaubert D, Wood K, Urh M.

Anal Chem. 2013 Jan 15;85(2):907-14. doi: 10.1021/ac302423t. Epub 2013 Jan 7.

PMID:
23256507
22.

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.

Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Górecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kües U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Dueñas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS.

Science. 2012 Jun 29;336(6089):1715-9. doi: 10.1126/science.1221748.

23.

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis.

Fernandez-Fueyo E, Ruiz-Dueñas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Watanabe T, Ryu JS, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter BonDurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavín JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kües U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D.

Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):5458-63. doi: 10.1073/pnas.1119912109. Epub 2012 Mar 20. Erratum in: Proc Natl Acad Sci U S A. 2012 May 22;109(21):8352. San, Ryu Jae [corrected to Ryu, Jae San].

24.

Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species.

Vanden Wymelenberg A, Gaskell J, Mozuch M, BonDurant SS, Sabat G, Ralph J, Skyba O, Mansfield SD, Blanchette RA, Grigoriev IV, Kersten PJ, Cullen D.

Appl Environ Microbiol. 2011 Jul;77(13):4499-507. doi: 10.1128/AEM.00508-11. Epub 2011 May 6.

25.

Comparative transcriptome and secretome analysis of wood decay fungi Postia placenta and Phanerochaete chrysosporium.

Vanden Wymelenberg A, Gaskell J, Mozuch M, Sabat G, Ralph J, Skyba O, Mansfield SD, Blanchette RA, Martinez D, Grigoriev I, Kersten PJ, Cullen D.

Appl Environ Microbiol. 2010 Jun;76(11):3599-610. doi: 10.1128/AEM.00058-10. Epub 2010 Apr 16.

26.

Transcriptome and secretome analyses of Phanerochaete chrysosporium reveal complex patterns of gene expression.

Vanden Wymelenberg A, Gaskell J, Mozuch M, Kersten P, Sabat G, Martinez D, Cullen D.

Appl Environ Microbiol. 2009 Jun;75(12):4058-68. doi: 10.1128/AEM.00314-09. Epub 2009 Apr 17.

27.

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.

Martinez D, Challacombe J, Morgenstern I, Hibbett D, Schmoll M, Kubicek CP, Ferreira P, Ruiz-Duenas FJ, Martinez AT, Kersten P, Hammel KE, Vanden Wymelenberg A, Gaskell J, Lindquist E, Sabat G, Bondurant SS, Larrondo LF, Canessa P, Vicuna R, Yadav J, Doddapaneni H, Subramanian V, Pisabarro AG, Lavín JL, Oguiza JA, Master E, Henrissat B, Coutinho PM, Harris P, Magnuson JK, Baker SE, Bruno K, Kenealy W, Hoegger PJ, Kües U, Ramaiya P, Lucas S, Salamov A, Shapiro H, Tu H, Chee CL, Misra M, Xie G, Teter S, Yaver D, James T, Mokrejs M, Pospisek M, Grigoriev IV, Brettin T, Rokhsar D, Berka R, Cullen D.

Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1954-9. doi: 10.1073/pnas.0809575106. Epub 2009 Feb 4.

28.

Proteomic analysis of Schistosoma mansoni proteins released during in vitro miracidium-to-sporocyst transformation.

Wu XJ, Sabat G, Brown JF, Zhang M, Taft A, Peterson N, Harms A, Yoshino TP.

Mol Biochem Parasitol. 2009 Mar;164(1):32-44. doi: 10.1016/j.molbiopara.2008.11.005. Epub 2008 Nov 27.

29.

A novel serum-free method for culturing human prenatal retinal pigment epithelial cells.

Gamm DM, Melvan JN, Shearer RL, Pinilla I, Sabat G, Svendsen CN, Wright LS.

Invest Ophthalmol Vis Sci. 2008 Feb;49(2):788-99. doi: 10.1167/iovs.07-0777.

PMID:
18235029
30.

Feasibility of pathways for transfer of acyl groups from mitochondria to the cytosol to form short chain acyl-CoAs in the pancreatic beta cell.

MacDonald MJ, Smith AD 3rd, Hasan NM, Sabat G, Fahien LA.

J Biol Chem. 2007 Oct 19;282(42):30596-606. Epub 2007 Aug 27.

31.

Structure, organization, and transcriptional regulation of a family of copper radical oxidase genes in the lignin-degrading basidiomycete Phanerochaete chrysosporium.

Vanden Wymelenberg A, Sabat G, Mozuch M, Kersten PJ, Cullen D, Blanchette RA.

Appl Environ Microbiol. 2006 Jul;72(7):4871-7.

32.

Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveal complex mixtures of secreted proteins.

Vanden Wymelenberg A, Minges P, Sabat G, Martinez D, Aerts A, Salamov A, Grigoriev I, Shapiro H, Putnam N, Belinky P, Dosoretz C, Gaskell J, Kersten P, Cullen D.

Fungal Genet Biol. 2006 May;43(5):343-56. Epub 2006 Mar 9.

PMID:
16524749
33.

High-throughput purification and quality assurance of Arabidopsis thaliana proteins for eukaryotic structural genomics.

Jeon WB, Aceti DJ, Bingman CA, Vojtik FC, Olson AC, Ellefson JM, McCombs JE, Sreenath HK, Blommel PG, Seder KD, Burns BT, Geetha HV, Harms AC, Sabat G, Sussman MR, Fox BG, Phillips GN Jr.

J Struct Funct Genomics. 2005;6(2-3):143-7.

PMID:
16211511
34.

The Phanerochaete chrysosporium secretome: database predictions and initial mass spectrometry peptide identifications in cellulose-grown medium.

Wymelenberg AV, Sabat G, Martinez D, Rajangam AS, Teeri TT, Gaskell J, Kersten PJ, Cullen D.

J Biotechnol. 2005 Jul 21;118(1):17-34.

PMID:
15888348
35.

Transporter-mediated uptake of 2-chloro- and 2-hydroxybenzoate by Pseudomonas huttiensis strain D1.

Yuroff AS, Sabat G, Hickey WJ.

Appl Environ Microbiol. 2003 Dec;69(12):7401-8.

37.

Cloning, nucleotide sequencing, and functional analysis of a novel, mobile cluster of biodegradation genes from Pseudomonas aeruginosa strain JB2.

Hickey WJ, Sabat G, Yuroff AS, Arment AR, Pérez-Lesher J.

Appl Environ Microbiol. 2001 Oct;67(10):4603-9.

38.

Selective and sensitive method for PCR amplification of Escherichia coli 16S rRNA genes in soil.

Sabat G, Rose P, Hickey WJ, Harkin JM.

Appl Environ Microbiol. 2000 Feb;66(2):844-9.

39.

[Case of criminal poisoning by ingestion of henbane seed; renewed outbreaks of these poisonings among the Moslem population].

MICHAUX P, SABAT G.

Alger Medicale. 1957 Jan;61(1):17-26. French. No abstract available.

PMID:
13402674

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