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Items: 1 to 50 of 118

1.

Identification and structural analysis of the tripartite α-pore forming toxin of Aeromonas hydrophila.

Wilson JS, Churchill-Angus AM, Davies SP, Sedelnikova SE, Tzokov SB, Rafferty JB, Bullough PA, Bisson C, Baker PJ.

Nat Commun. 2019 Jul 1;10(1):2900. doi: 10.1038/s41467-019-10777-x.

2.

Distant Non-Obvious Mutations Influence the Activity of a Hyperthermophilic Pyrococcus furiosus Phosphoglucose Isomerase.

Subramanian K, Mitusińska K, Raedts J, Almourfi F, Joosten HJ, Hendriks S, Sedelnikova SE, Kengen SWM, Hagen WR, Góra A, Martins Dos Santos VAP, Baker PJ, van der Oost J, Schaap PJ.

Biomolecules. 2019 May 31;9(6). pii: E212. doi: 10.3390/biom9060212.

3.

Structural insights into the function of type VI secretion system TssA subunits.

Dix SR, Owen HJ, Sun R, Ahmad A, Shastri S, Spiewak HL, Mosby DJ, Harris MJ, Batters SL, Brooker TA, Tzokov SB, Sedelnikova SE, Baker PJ, Bullough PA, Rice DW, Thomas MS.

Nat Commun. 2018 Nov 12;9(1):4765. doi: 10.1038/s41467-018-07247-1.

4.

TssA from Aeromonas hydrophila: expression, purification and crystallographic studies.

Dix SR, Sun R, Harris MJ, Batters SL, Sedelnikova SE, Baker PJ, Thomas MS, Rice DW.

Acta Crystallogr F Struct Biol Commun. 2018 Sep 1;74(Pt 9):578-582. doi: 10.1107/S2053230X18010439. Epub 2018 Sep 3.

5.

TssA from Burkholderia cenocepacia: expression, purification, crystallization and crystallographic analysis.

Owen HJ, Sun R, Ahmad A, Sedelnikova SE, Baker PJ, Thomas MS, Rice DW.

Acta Crystallogr F Struct Biol Commun. 2018 Sep 1;74(Pt 9):536-542. doi: 10.1107/S2053230X18009706. Epub 2018 Aug 29.

6.

Structural and functional studies of histidine biosynthesis in Acanthamoeba spp. demonstrates a novel molecular arrangement and target for antimicrobials.

Rice CA, Campbell SJ, Bisson C, Owen HJ, Sedelnikova SE, Baker PJ, Rice DW, Henriquez FL, Roberts CW.

PLoS One. 2018 Jul 3;13(7):e0198827. doi: 10.1371/journal.pone.0198827. eCollection 2018.

7.

Elucidating the structural basis for differing enzyme inhibitor potency by cryo-EM.

Rawson S, Bisson C, Hurdiss DL, Fazal A, McPhillie MJ, Sedelnikova SE, Baker PJ, Rice DW, Muench SP.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1795-1800. doi: 10.1073/pnas.1708839115. Epub 2018 Feb 6.

8.

Pnc1 piggy-back import into peroxisomes relies on Gpd1 homodimerisation.

Saryi NA, Hutchinson JD, Al-Hejjaj MY, Sedelnikova S, Baker P, Hettema EH.

Sci Rep. 2017 Feb 17;7:42579. doi: 10.1038/srep42579.

9.

The mechanism of a formaldehyde-sensing transcriptional regulator.

Denby KJ, Iwig J, Bisson C, Westwood J, Rolfe MD, Sedelnikova SE, Higgins K, Maroney MJ, Baker PJ, Chivers PT, Green J.

Sci Rep. 2016 Dec 9;6:38879. doi: 10.1038/srep38879.

10.

Structural insights into dynamics of RecU-HJ complex formation elucidates key role of NTR and stalk region toward formation of reactive state.

Khavnekar S, Dantu SC, Sedelnikova S, Ayora S, Rafferty J, Kale A.

Nucleic Acids Res. 2017 Jan 25;45(2):975-986. doi: 10.1093/nar/gkw1165. Epub 2016 Nov 29.

11.

Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.

Bisson C, Britton KL, Sedelnikova SE, Rodgers HF, Eadsforth TC, Viner RC, Hawkes TR, Baker PJ, Rice DW.

Angew Chem Int Ed Engl. 2016 Oct 17;55(43):13485-13489. doi: 10.1002/anie.201607185. Epub 2016 Sep 26.

12.

Direct observation of DNA threading in flap endonuclease complexes.

AlMalki FA, Flemming CS, Zhang J, Feng M, Sedelnikova SE, Ceska T, Rafferty JB, Sayers JR, Artymiuk PJ.

Nat Struct Mol Biol. 2016 Jul;23(7):640-6. doi: 10.1038/nsmb.3241. Epub 2016 Jun 6.

13.

Two complementary approaches for intracellular delivery of exogenous enzymes.

Rust A, Hassan HH, Sedelnikova S, Niranjan D, Hautbergue G, Abbas SA, Partridge L, Rice D, Binz T, Davletov B.

Sci Rep. 2015 Jul 24;5:12444. doi: 10.1038/srep12444.

14.

Crystal Structures Reveal that the Reaction Mechanism of Imidazoleglycerol-Phosphate Dehydratase Is Controlled by Switching Mn(II) Coordination.

Bisson C, Britton KL, Sedelnikova SE, Rodgers HF, Eadsforth TC, Viner RC, Hawkes TR, Baker PJ, Rice DW.

Structure. 2015 Jul 7;23(7):1236-45. doi: 10.1016/j.str.2015.05.012. Epub 2015 Jun 18.

15.

Crystallization and preliminary crystallographic analysis of the putative sugar-binding protein Msmeg_0515 (AgaE) from Mycobacterium smegmatis.

Almourfi FM, Rodgers HF, Sedelnikova SE, Baker PJ.

Acta Crystallogr F Struct Biol Commun. 2015 Feb;71(Pt 2):189-93. doi: 10.1107/S2053230X15000035. Epub 2015 Jan 28.

16.

Carbon monoxide-releasing molecule-3 (CORM-3; Ru(CO)3Cl(glycinate)) as a tool to study the concerted effects of carbon monoxide and nitric oxide on bacterial flavohemoglobin Hmp: applications and pitfalls.

Tinajero-Trejo M, Denby KJ, Sedelnikova SE, Hassoubah SA, Mann BE, Poole RK.

J Biol Chem. 2014 Oct 24;289(43):29471-82. doi: 10.1074/jbc.M114.573444. Epub 2014 Sep 5.

17.

Crystallization and preliminary crystallographic analysis of a surface antigen glycoprotein, SAG19, from Eimeria tenella.

Ramly NZ, Rouzheinikov SN, Sedelnikova SE, Baker PJ, Chow YP, Wan KL, Nathan S, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1380-3. doi: 10.1107/S1744309113029734. Epub 2013 Nov 29.

18.

Structure of the NheA component of the Nhe toxin from Bacillus cereus: implications for function.

Ganash M, Phung D, Sedelnikova SE, Lindbäck T, Granum PE, Artymiuk PJ.

PLoS One. 2013 Sep 10;8(9):e74748. doi: 10.1371/journal.pone.0074748. eCollection 2013.

19.

Mutants of phage bIL67 RuvC with enhanced Holliday junction binding selectivity and resolution symmetry.

Green V, Curtis FA, Sedelnikova S, Rafferty JB, Sharples GJ.

Mol Microbiol. 2013 Sep;89(6):1240-58. doi: 10.1111/mmi.12343. Epub 2013 Aug 14.

20.

The structure of Escherichia coli ExoIX--implications for DNA binding and catalysis in flap endonucleases.

Anstey-Gilbert CS, Hemsworth GR, Flemming CS, Hodskinson MR, Zhang J, Sedelnikova SE, Stillman TJ, Sayers JR, Artymiuk PJ.

Nucleic Acids Res. 2013 Sep;41(17):8357-67. doi: 10.1093/nar/gkt591. Epub 2013 Jul 2.

21.

Nitric oxide reactivities of the two globins of the foodborne pathogen Campylobacter jejuni: roles in protection from nitrosative stress and analysis of potential reductants.

Tinajero-Trejo M, Vreugdenhil A, Sedelnikova SE, Davidge KS, Poole RK.

Nitric Oxide. 2013 Nov 1;34:65-75. doi: 10.1016/j.niox.2013.06.002. Epub 2013 Jun 11.

PMID:
23764490
22.

Insights into the structure and assembly of the Bacillus subtilis clamp-loader complex and its interaction with the replicative helicase.

Afonso JP, Chintakayala K, Suwannachart C, Sedelnikova S, Giles K, Hoyes JB, Soultanas P, Rafferty JB, Oldham NJ.

Nucleic Acids Res. 2013 May;41(9):5115-26. doi: 10.1093/nar/gkt173. Epub 2013 Mar 21.

23.

Crystallization and preliminary crystallographic analysis of the NheA component of the Nhe toxin from Bacillus cereus.

Phung D, Ganash M, Sedelnikova SE, Lindbäck T, Granum PE, Artymiuk PJ.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1073-6. doi: 10.1107/S1744309112030813. Epub 2012 Aug 31.

24.

Crystallization and preliminary X-ray analysis of the receiver domain of a putative response regulator, BPSL0128, from Burkholderia pseudomallei.

Abd Aziz AG, Sedelnikova SE, Ruzheinikov SN, Thorpe S, Mohamed R, Nathan S, Rafferty JB, Baker PJ, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Aug 1;68(Pt 8):917-22. doi: 10.1107/S1744309112025791. Epub 2012 Jul 31.

25.

Cloning, purification, crystallization and preliminary X-ray analysis of the Burkholderia pseudomallei L1 ribosomal protein.

Abd Aziz AG, Ruzheinikov SN, Sedelnikova SE, Mohamed R, Nathan S, Baker PJ, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Mar 1;68(Pt 3):347-50. doi: 10.1107/S1744309112004800. Epub 2012 Feb 22.

26.

Cloning, purification and crystallographic analysis of a hypothetical protein, BPSL1549, from Burkholderia pseudomallei.

Cruz-Migoni A, Ruzheinikov SN, Sedelnikova SE, Obeng B, Chieng S, Mohamed R, Nathan S, Baker PJ, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1;67(Pt 12):1623-6. doi: 10.1107/S1744309111028995. Epub 2011 Nov 30.

27.

A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.

Cruz-Migoni A, Hautbergue GM, Artymiuk PJ, Baker PJ, Bokori-Brown M, Chang CT, Dickman MJ, Essex-Lopresti A, Harding SV, Mahadi NM, Marshall LE, Mobbs GW, Mohamed R, Nathan S, Ngugi SA, Ong C, Ooi WF, Partridge LJ, Phillips HL, Raih MF, Ruzheinikov S, Sarkar-Tyson M, Sedelnikova SE, Smither SJ, Tan P, Titball RW, Wilson SA, Rice DW.

Science. 2011 Nov 11;334(6057):821-4. doi: 10.1126/science.1211915.

28.

The single-domain globin from the pathogenic bacterium Campylobacter jejuni: novel D-helix conformation, proximal hydrogen bonding that influences ligand binding, and peroxidase-like redox properties.

Shepherd M, Barynin V, Lu C, Bernhardt PV, Wu G, Yeh SR, Egawa T, Sedelnikova SE, Rice DW, Wilson JL, Poole RK.

J Biol Chem. 2010 Apr 23;285(17):12747-54. doi: 10.1074/jbc.M109.084509. Epub 2010 Feb 17.

29.

Crystallization and preliminary X-ray analysis of D-2-hydroxyacid dehydrogenase from Haloferax mediterranei.

Domenech J, Baker PJ, Sedelnikova SE, Rodgers HF, Rice DW, Ferrer J.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Apr 1;65(Pt 4):415-8. doi: 10.1107/S174430910900863X. Epub 2009 Mar 26.

30.

An inhibitor of FtsZ with potent and selective anti-staphylococcal activity.

Haydon DJ, Stokes NR, Ure R, Galbraith G, Bennett JM, Brown DR, Baker PJ, Barynin VV, Rice DW, Sedelnikova SE, Heal JR, Sheridan JM, Aiwale ST, Chauhan PK, Srivastava A, Taneja A, Collins I, Errington J, Czaplewski LG.

Science. 2008 Sep 19;321(5896):1673-5. doi: 10.1126/science.1159961.

31.

Cloning, purification and preliminary crystallographic analysis of a putative DNA-binding membrane protein, YmfM, from Staphylococcus aureus.

Xu L, Sedelnikova SE, Baker PJ, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Jul 1;64(Pt 7):656-8. doi: 10.1107/S1744309108016734. Epub 2008 Jun 28.

32.

Crystal structure of S. aureus YlaN, an essential leucine rich protein involved in the control of cell shape.

Xu L, Sedelnikova SE, Baker PJ, Hunt A, Errington J, Rice DW.

Proteins. 2007 Aug 1;68(2):438-45.

PMID:
17469204
33.

RusA Holliday junction resolvase: DNA complex structure--insights into selectivity and specificity.

Macmaster R, Sedelnikova S, Baker PJ, Bolt EL, Lloyd RG, Rafferty JB.

Nucleic Acids Res. 2006;34(19):5577-84. Epub 2006 Oct 5.

34.

Cloning, purification and preliminary crystallographic analysis of a putative pyridoxal kinase from Bacillus subtilis.

Newman JA, Das SK, Sedelnikova SE, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Oct 1;62(Pt 10):1006-9. Epub 2006 Sep 30.

35.
36.

The essential GTPase YphC displays a major domain rearrangement associated with nucleotide binding.

Muench SP, Xu L, Sedelnikova SE, Rice DW.

Proc Natl Acad Sci U S A. 2006 Aug 15;103(33):12359-64. Epub 2006 Aug 7.

37.

Cloning, purification and preliminary crystallographic analysis of a conserved hypothetical protein, SA0961 (YlaN), from Staphylococcus aureus.

Xu L, Sedelnikova SE, Baker PJ, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 1;62(Pt 8):778-80. Epub 2006 Jul 24.

38.

Cloning, purification and preliminary crystallographic analysis of the Bacillus subtilis GTPase YphC-GDP complex.

Xu L, Muench SP, Roujeinikova A, Sedelnikova SE, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 May 1;62(Pt 5):435-7. Epub 2006 Apr 12.

39.

Structural insight into gene transcriptional regulation and effector binding by the Lrp/AsnC family.

Thaw P, Sedelnikova SE, Muranova T, Wiese S, Ayora S, Alonso JC, Brinkman AB, Akerboom J, van der Oost J, Rafferty JB.

Nucleic Acids Res. 2006 Mar 9;34(5):1439-49. Print 2006. Erratum in: Nucleic Acids Res. 2006;34(6):1944.

40.

Purification, crystallization and preliminary crystallographic analysis of Arabidopsis thaliana imidazoleglycerol-phosphate dehydratase.

Glynn SE, Baker PJ, Sedelnikova SE, Levy CW, Rodgers HF, Blank J, Hawkes TR, Rice DW.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Aug 1;61(Pt 8):776-8. Epub 2005 Jul 30.

41.

Structure and dynamics of coxsackievirus B4 2A proteinase, an enyzme involved in the etiology of heart disease.

Baxter NJ, Roetzer A, Liebig HD, Sedelnikova SE, Hounslow AM, Skern T, Waltho JP.

J Virol. 2006 Feb;80(3):1451-62.

42.

Structure and mechanism of imidazoleglycerol-phosphate dehydratase.

Glynn SE, Baker PJ, Sedelnikova SE, Davies CL, Eadsforth TC, Levy CW, Rodgers HF, Blackburn GM, Hawkes TR, Viner R, Rice DW.

Structure. 2005 Dec;13(12):1809-17.

43.

Substrate-induced conformational changes in Bacillus subtilis glutamate racemase and their implications for drug discovery.

Ruzheinikov SN, Taal MA, Sedelnikova SE, Baker PJ, Rice DW.

Structure. 2005 Nov;13(11):1707-13.

44.

Amplification of bifunctional ligands for calmodulin from a dynamic combinatorial library.

Milanesi L, Hunter CA, Sedelnikova SE, Waltho JP.

Chemistry. 2006 Jan 23;12(4):1081-7.

PMID:
16240315
45.

The structure of Bacillus subtilis RecU Holliday junction resolvase and its role in substrate selection and sequence-specific cleavage.

McGregor N, Ayora S, Sedelnikova S, Carrasco B, Alonso JC, Thaw P, Rafferty J.

Structure. 2005 Sep;13(9):1341-51.

46.

The crystal structures of Lactococcus lactis MG1363 Dps proteins reveal the presence of an N-terminal helix that is required for DNA binding.

Stillman TJ, Upadhyay M, Norte VA, Sedelnikova SE, Carradus M, Tzokov S, Bullough PA, Shearman CA, Gasson MJ, Williams CH, Artymiuk PJ, Green J.

Mol Microbiol. 2005 Aug;57(4):1101-12.

47.

Expression, purification and preliminary X-ray analysis of crystals of Bacillus subtilis glutamate racemase.

Taal MA, Sedelnikova SE, Ruzheinikov SN, Baker PJ, Rice DW.

Acta Crystallogr D Biol Crystallogr. 2004 Nov;60(Pt 11):2031-4. Epub 2004 Oct 20.

PMID:
15502318
48.

The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.

Berrisford JM, Akerboom J, Brouns S, Sedelnikova SE, Turnbull AP, van der Oost J, Salmon L, Hardré R, Murray IA, Blackburn GM, Rice DW, Baker PJ.

J Mol Biol. 2004 Oct 22;343(3):649-57.

PMID:
15465052
49.

Analysis of the open and closed conformations of the GTP-binding protein YsxC from Bacillus subtilis.

Ruzheinikov SN, Das SK, Sedelnikova SE, Baker PJ, Artymiuk PJ, García-Lara J, Foster SJ, Rice DW.

J Mol Biol. 2004 May 28;339(2):265-78.

PMID:
15136032
50.

Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase.

Hartley A, Glynn SE, Barynin V, Baker PJ, Sedelnikova SE, Verhees C, de Geus D, van der Oost J, Timson DJ, Reece RJ, Rice DW.

J Mol Biol. 2004 Mar 19;337(2):387-98.

PMID:
15003454

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