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Items: 36

1.

Ribosome Biogenesis in Plants: From Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors.

Sáez-Vásquez J, Delseny M.

Plant Cell. 2019 Sep;31(9):1945-1967. doi: 10.1105/tpc.18.00874. Epub 2019 Jun 25. Review.

2.

Phenotypic Trait Variation as a Response to Altitude-Related Constraints in Arabidopsis Populations.

Duruflé H, Ranocha P, Mbadinga Mbadinga DL, Déjean S, Bonhomme M, San Clemente H, Viudes S, Eljebbawi A, Delorme-Hinoux V, Sáez-Vásquez J, Reichheld JP, Escaravage N, Burrus M, Dunand C.

Front Plant Sci. 2019 Apr 9;10:430. doi: 10.3389/fpls.2019.00430. eCollection 2019.

3.

Arabidopsis RIBOSOMAL RNA PROCESSING7 Is Required for 18S rRNA Maturation.

Micol-Ponce R, Sarmiento-Mañús R, Ruiz-Bayón A, Montacié C, Sáez-Vasquez J, Ponce MR.

Plant Cell. 2018 Nov;30(11):2855-2872. doi: 10.1105/tpc.18.00245. Epub 2018 Oct 25.

4.

Nucleolar Proteome Analysis and Proteasomal Activity Assays Reveal a Link between Nucleolus and 26S Proteasome in A. thaliana.

Montacié C, Durut N, Opsomer A, Palm D, Comella P, Picart C, Carpentier MC, Pontvianne F, Carapito C, Schleiff E, Sáez-Vásquez J.

Front Plant Sci. 2017 Oct 20;8:1815. doi: 10.3389/fpls.2017.01815. eCollection 2017.

5.

The siRNA suppressor RTL1 is redox-regulated through glutathionylation of a conserved cysteine in the double-stranded-RNA-binding domain.

Charbonnel C, Niazi AK, Elvira-Matelot E, Nowak E, Zytnicki M, de Bures A, Jobet E, Opsomer A, Shamandi N, Nowotny M, Carapito C, Reichheld JP, Vaucheret H, Sáez-Vásquez J.

Nucleic Acids Res. 2017 Nov 16;45(20):11891-11907. doi: 10.1093/nar/gkx820.

6.

Functional alterations of root meristematic cells of Arabidopsis thaliana induced by a simulated microgravity environment.

Boucheron-Dubuisson E, Manzano AI, Le Disquet I, Matía I, Sáez-Vasquez J, van Loon JJ, Herranz R, Carnero-Diaz E, Medina FJ.

J Plant Physiol. 2016 Dec 1;207:30-41. doi: 10.1016/j.jplph.2016.09.011. Epub 2016 Oct 19.

PMID:
27792899
7.

Fluorescence-Activated Nucleolus Sorting in Arabidopsis.

Pontvianne F, Boyer-Clavel M, Sáez-Vásquez J.

Methods Mol Biol. 2016;1455:203-11. doi: 10.1007/978-1-4939-3792-9_15.

PMID:
27576720
8.

Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.

Pontvianne F, Carpentier MC, Durut N, Pavlištová V, Jaške K, Schořová Š, Parrinello H, Rohmer M, Pikaard CS, Fojtová M, Fajkus J, Sáez-Vásquez J.

Cell Rep. 2016 Aug 9;16(6):1574-1587. doi: 10.1016/j.celrep.2016.07.016. Epub 2016 Jul 28.

9.

A genetic link between epigenetic repressor AS1-AS2 and a putative small subunit processome in leaf polarity establishment of Arabidopsis.

Matsumura Y, Ohbayashi I, Takahashi H, Kojima S, Ishibashi N, Keta S, Nakagawa A, Hayashi R, Saéz-Vásquez J, Echeverria M, Sugiyama M, Nakamura K, Machida C, Machida Y.

Biol Open. 2016 Jul 15;5(7):942-54. doi: 10.1242/bio.019109.

10.

Arabidopsis RNASE THREE LIKE2 Modulates the Expression of Protein-Coding Genes via 24-Nucleotide Small Interfering RNA-Directed DNA Methylation.

Elvira-Matelot E, Hachet M, Shamandi N, Comella P, Sáez-Vásquez J, Zytnicki M, Vaucheret H.

Plant Cell. 2016 Feb;28(2):406-25. doi: 10.1105/tpc.15.00540. Epub 2016 Jan 13.

11.

Plants Encode a General siRNA Suppressor That Is Induced and Suppressed by Viruses.

Shamandi N, Zytnicki M, Charbonnel C, Elvira-Matelot E, Bochnakian A, Comella P, Mallory AC, Lepère G, Sáez-Vásquez J, Vaucheret H.

PLoS Biol. 2015 Dec 22;13(12):e1002326. doi: 10.1371/journal.pbio.1002326. eCollection 2015 Dec.

12.

Parallel action of AtDRB2 and RdDM in the control of transposable element expression.

Clavel M, Pélissier T, Descombin J, Jean V, Picart C, Charbonel C, Saez-Vásquez J, Bousquet-Antonelli C, Deragon JM.

BMC Plant Biol. 2015 Mar 3;15:70. doi: 10.1186/s12870-015-0455-z.

13.

Nucleolin: dual roles in rDNA chromatin transcription.

Durut N, Sáez-Vásquez J.

Gene. 2015 Feb 1;556(1):7-12. doi: 10.1016/j.gene.2014.09.023. Epub 2014 Sep 16. Review.

PMID:
25225127
14.

A duplicated NUCLEOLIN gene with antagonistic activity is required for chromatin organization of silent 45S rDNA in Arabidopsis.

Durut N, Abou-Ellail M, Pontvianne F, Das S, Kojima H, Ukai S, de Bures A, Comella P, Nidelet S, Rialle S, Merret R, Echeverria M, Bouvet P, Nakamura K, Sáez-Vásquez J.

Plant Cell. 2014 Mar;26(3):1330-44. doi: 10.1105/tpc.114.123893. Epub 2014 Mar 25.

15.

NTR/NRX define a new thioredoxin system in the nucleus of Arabidopsis thaliana cells.

Marchal C, Delorme-Hinoux V, Bariat L, Siala W, Belin C, Saez-Vasquez J, Riondet C, Reichheld JP.

Mol Plant. 2014 Jan;7(1):30-44. doi: 10.1093/mp/sst162. Epub 2013 Nov 19.

16.

Regulation of Pol I-transcribed 45S rDNA and Pol III-transcribed 5S rDNA in Arabidopsis.

Layat E, Sáez-Vásquez J, Tourmente S.

Plant Cell Physiol. 2012 Feb;53(2):267-76. doi: 10.1093/pcp/pcr177. Epub 2011 Dec 14. Review.

PMID:
22173098
17.

Variations in a team: major and minor variants of Arabidopsis thaliana rDNA genes.

Abou-Ellail M, Cooke R, Sáez-Vásquez J.

Nucleus. 2011 Jul-Aug;2(4):294-9. doi: 10.4161/nucl.2.4.16561. Epub 2011 Jul 1.

PMID:
21941113
18.

Sublethal cadmium intoxication in Arabidopsis thaliana impacts translation at multiple levels.

Sormani R, Delannoy E, Lageix S, Bitton F, Lanet E, Saez-Vasquez J, Deragon JM, Renou JP, Robaglia C.

Plant Cell Physiol. 2011 Feb;52(2):436-47. doi: 10.1093/pcp/pcr001. Epub 2011 Jan 19.

PMID:
21252299
19.

Nucleolin is required for DNA methylation state and the expression of rRNA gene variants in Arabidopsis thaliana.

Pontvianne F, Abou-Ellail M, Douet J, Comella P, Matia I, Chandrasekhara C, Debures A, Blevins T, Cooke R, Medina FJ, Tourmente S, Pikaard CS, Sáez-Vásquez J.

PLoS Genet. 2010 Nov 24;6(11):e1001225. doi: 10.1371/journal.pgen.1001225.

20.

Genome organization and function: a view from yeast and Arabidopsis.

Sáez-Vásquez J, Gadal O.

Mol Plant. 2010 Jul;3(4):678-90. doi: 10.1093/mp/ssq034. Epub 2010 Jul 1. Review.

21.

Identification of protein factors and U3 snoRNAs from a Brassica oleracea RNP complex involved in the processing of pre-rRNA.

Samaha H, Delorme V, Pontvianne F, Cooke R, Delalande F, Van Dorsselaer A, Echeverria M, Sáez-Vásquez J.

Plant J. 2010 Feb 1;61(3):383-98. doi: 10.1111/j.1365-313X.2009.04061.x. Epub 2009 Nov 3.

22.

Processing of a dicistronic tRNA-snoRNA precursor: combined analysis in vitro and in vivo reveals alternate pathways and coupling to assembly of snoRNP.

Barbezier N, Canino G, Rodor J, Jobet E, Saez-Vasquez J, Marchfelder A, Echeverría M.

Plant Physiol. 2009 Jul;150(3):1598-610. doi: 10.1104/pp.109.137968. Epub 2009 May 6.

23.

Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3'ETS in Arabidopsis.

Comella P, Pontvianne F, Lahmy S, Vignols F, Barbezier N, Debures A, Jobet E, Brugidou E, Echeverria M, Sáez-Vásquez J.

Nucleic Acids Res. 2008 Mar;36(4):1163-75. Epub 2007 Dec 23.

24.

Sugar-inducible expression of the nucleolin-1 gene of Arabidopsis thaliana and its role in ribosome synthesis, growth and development.

Kojima H, Suzuki T, Kato T, Enomoto K, Sato S, Kato T, Tabata S, Sáez-Vasquez J, Echeverría M, Nakagawa T, Ishiguro S, Nakamura K.

Plant J. 2007 Mar;49(6):1053-63. Epub 2007 Feb 7.

25.

Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis.

Pontvianne F, Matía I, Douet J, Tourmente S, Medina FJ, Echeverria M, Sáez-Vásquez J.

Mol Biol Cell. 2007 Feb;18(2):369-79. Epub 2006 Nov 15.

26.

Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

Pontier D, Yahubyan G, Vega D, Bulski A, Saez-Vasquez J, Hakimi MA, Lerbs-Mache S, Colot V, Lagrange T.

Genes Dev. 2005 Sep 1;19(17):2030-40.

27.
28.

Characterization of a crucifer plant pre-rRNA processing complex.

Sáez-Vasquez J, Caparros-Ruiz D, Barneche F, Echeverría M.

Biochem Soc Trans. 2004 Aug;32(Pt 4):578-80.

PMID:
15270680
29.

Purification and transcriptional analysis of RNA polymerase I holoenzymes from broccoli (Brassica oleracea) and frog (Xenopus laevis).

Saez-Vasquez J, Albert AC, Earley K, Pikaard CS.

Methods Enzymol. 2003;370:121-38. No abstract available.

PMID:
14712639
30.

RNA polymerase I holoenzyme-promoter complexes include an associated CK2-like protein kinase.

Saez-Vasquez J, Meissner M, Pikaard CS.

Plant Mol Biol. 2001 Oct;47(3):449-59.

PMID:
11587515
31.

RNA polymerase I holoenzyme-promoter interactions.

Saez-Vasquez J, Pikaard CS.

J Biol Chem. 2000 Nov 24;275(47):37173-80.

32.
33.

cDNA sequence, genomic organization and differential expression of three Arabidopsis genes for germin/oxalate oxidase-like proteins.

Membré N, Berna A, Neutelings G, David A, David H, Staiger D, Sáez Vásquez J, Raynal M, Delseny M, Bernier F.

Plant Mol Biol. 1997 Nov;35(4):459-69.

PMID:
9349269
34.
35.

A rapeseed cold-inducible transcript encodes a phosphoenolpyruvate carboxykinase.

Sáez-Vásquez J, Raynal M, Delseny M.

Plant Physiol. 1995 Oct;109(2):611-8.

36.

Two related, low-temperature-induced genes from Brassica napus are homologous to the human tumour bbc1 (breast basic conserved) gene.

Sáez-Vásquez J, Raynal M, Meza-Basso L, Delseny M.

Plant Mol Biol. 1993 Dec;23(6):1211-21.

PMID:
8292785

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