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Items: 22

1.

Programmable DNA cleavage by Ago nucleases from mesophilic bacteria Clostridium butyricum and Limnothrix rosea.

Kuzmenko A, Yudin D, Ryazansky S, Kulbachinskiy A, Aravin AA.

Nucleic Acids Res. 2019 May 22. pii: gkz379. doi: 10.1093/nar/gkz379. [Epub ahead of print]

PMID:
31114878
2.

The Integrity of piRNA Clusters is Abolished by Insulators in the Drosophila Germline.

Radion E, Sokolova O, Ryazansky S, Komarov PA, Abramov Y, Kalmykova A.

Genes (Basel). 2019 Mar 11;10(3). pii: E209. doi: 10.3390/genes10030209.

3.

The Expanded Universe of Prokaryotic Argonaute Proteins.

Ryazansky S, Kulbachinskiy A, Aravin AA.

MBio. 2018 Dec 18;9(6). pii: e01935-18. doi: 10.1128/mBio.01935-18.

4.

Key role of piRNAs in telomeric chromatin maintenance and telomere nuclear positioning in Drosophila germline.

Radion E, Morgunova V, Ryazansky S, Akulenko N, Lavrov S, Abramov Y, Komarov PA, Glukhov SI, Olovnikov I, Kalmykova A.

Epigenetics Chromatin. 2018 Jul 12;11(1):40. doi: 10.1186/s13072-018-0210-4.

5.

Transcriptional and chromatin changes accompanying de novo formation of transgenic piRNA clusters.

Akulenko N, Ryazansky S, Morgunova V, Komarov PA, Olovnikov I, Vaury C, Jensen S, Kalmykova A.

RNA. 2018 Apr;24(4):574-584. doi: 10.1261/rna.062851.117. Epub 2018 Jan 22.

6.

Drosophila Model for the Analysis of Genesis of LIM-kinase 1-Dependent Williams-Beuren Syndrome Cognitive Phenotypes: INDELs, Transposable Elements of the Tc1/Mariner Superfamily and MicroRNAs.

Savvateeva-Popova EV, Zhuravlev AV, Brázda V, Zakharov GA, Kaminskaya AN, Medvedeva AV, Nikitina EA, Tokmatcheva EV, Dolgaya JF, Kulikova DA, Zatsepina OG, Funikov SY, Ryazansky SS, Evgen'ev MB.

Front Genet. 2017 Sep 20;8:123. doi: 10.3389/fgene.2017.00123. eCollection 2017.

7.

Induction of Transposon Silencing in the Drosophila Germline.

Ryazansky SS, Stolyarenko AD, Klenov MS, Gvozdev VA.

Biochemistry (Mosc). 2017 May;82(5):565-571. doi: 10.1134/S0006297917050042. Review.

PMID:
28601066
8.

Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells.

Ilyin AA, Ryazansky SS, Doronin SA, Olenkina OM, Mikhaleva EA, Yakushev EY, Abramov YA, Belyakin SN, Ivankin AV, Pindyurin AV, Gvozdev VA, Klenov MS, Shevelyov YY.

Nucleic Acids Res. 2017 Jul 27;45(13):7666-7680. doi: 10.1093/nar/gkx355.

9.

Natural variation of piRNA expression affects immunity to transposable elements.

Ryazansky S, Radion E, Mironova A, Akulenko N, Abramov Y, Morgunova V, Kordyukova MY, Olovnikov I, Kalmykova A.

PLoS Genet. 2017 Apr 27;13(4):e1006731. doi: 10.1371/journal.pgen.1006731. eCollection 2017 Apr.

10.

Telomeric Retrotransposon HeT-A Contains a Bidirectional Promoter that Initiates Divergent Transcription of piRNA Precursors in Drosophila Germline.

Radion E, Ryazansky S, Akulenko N, Rozovsky Y, Kwon D, Morgunova V, Olovnikov I, Kalmykova A.

J Mol Biol. 2017 Oct 27;429(21):3280-3289. doi: 10.1016/j.jmb.2016.12.002. Epub 2016 Dec 7.

PMID:
27939293
11.

Interplay between RNA interference and heat shock response systems in Drosophila melanogaster.

Funikov SY, Ryazansky SS, Kanapin AA, Logacheva MD, Penin AA, Snezhkina AV, Shilova VY, Garbuz DG, Evgen'ev MB, Zatsepina OG.

Open Biol. 2016 Oct;6(10). pii: 160224.

12.

RNA helicase Spn-E is required to maintain Aub and AGO3 protein levels for piRNA silencing in the germline of Drosophila.

Ryazansky SS, Kotov AA, Kibanov MV, Akulenko NV, Korbut AP, Lavrov SA, Gvozdev VA, Olenina LV.

Eur J Cell Biol. 2016 Sep;95(9):311-22. doi: 10.1016/j.ejcb.2016.06.001. Epub 2016 Jun 6.

PMID:
27320195
13.

The peculiarities of piRNA expression upon heat shock exposure in Drosophila melanogaster.

Funikov SY, Ryazansky SS, Zelentsova ES, Popenko VI, Leonova OG, Garbuz DG, Evgen'ev MB, Zatsepina OG.

Mob Genet Elements. 2015 Sep 11;5(5):72-80. eCollection 2015 Sep-Oct.

14.

[Essential functions of microRNAs in the reproductive organs of animals].

Ryazansky SS, Mikhaleva EA, Olenkina OM.

Mol Biol (Mosk). 2014 May-Jun;48(3):371-85. Review. Russian.

15.

Euchromatic transposon insertions trigger production of novel Pi- and endo-siRNAs at the target sites in the drosophila germline.

Shpiz S, Ryazansky S, Olovnikov I, Abramov Y, Kalmykova A.

PLoS Genet. 2014 Feb 6;10(2):e1004138. doi: 10.1371/journal.pgen.1004138. eCollection 2014 Feb.

16.

Biogenesis, evolution, and functions of plant microRNAs.

Pashkovskiy PP, Ryazansky SS.

Biochemistry (Mosc). 2013 Jun;78(6):627-37. doi: 10.1134/S0006297913060084. Review.

17.

De novo piRNA cluster formation in the Drosophila germ line triggered by transgenes containing a transcribed transposon fragment.

Olovnikov I, Ryazansky S, Shpiz S, Lavrov S, Abramov Y, Vaury C, Jensen S, Kalmykova A.

Nucleic Acids Res. 2013 Jun;41(11):5757-68. doi: 10.1093/nar/gkt310. Epub 2013 Apr 24.

18.

Expansion and evolution of the X-linked testis specific multigene families in the melanogaster species subgroup.

Kogan GL, Usakin LA, Ryazansky SS, Gvozdev VA.

PLoS One. 2012;7(5):e37738. doi: 10.1371/journal.pone.0037738. Epub 2012 May 23.

19.

A novel organelle, the piNG-body, in the nuage of Drosophila male germ cells is associated with piRNA-mediated gene silencing.

Kibanov MV, Egorova KS, Ryazansky SS, Sokolova OA, Kotov AA, Olenkina OM, Stolyarenko AD, Gvozdev VA, Olenina LV.

Mol Biol Cell. 2011 Sep;22(18):3410-9. doi: 10.1091/mbc.E11-02-0168. Epub 2011 Jul 20.

20.

Evidence for post-transcriptional regulation of clustered microRNAs in Drosophila.

Ryazansky SS, Gvozdev VA, Berezikov E.

BMC Genomics. 2011 Jul 19;12:371. doi: 10.1186/1471-2164-12-371.

21.

Small RNAs and cancerogenesis.

Ryazansky SS, Gvozdev VA.

Biochemistry (Mosc). 2008 May;73(5):514-27. Review.

22.

Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline.

Klenov MS, Lavrov SA, Stolyarenko AD, Ryazansky SS, Aravin AA, Tuschl T, Gvozdev VA.

Nucleic Acids Res. 2007;35(16):5430-8. Epub 2007 Aug 15.

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