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Greenland Ice Sheet surface melt amplified by snowline migration and bare ice exposure.

Ryan JC, Smith LC, van As D, Cooley SW, Cooper MG, Pitcher LH, Hubbard A.

Sci Adv. 2019 Mar 6;5(3):eaav3738. doi: 10.1126/sciadv.aav3738. eCollection 2019 Mar.


Management of Older Patients With Metastatic Renal Cell Carcinoma Receiving Sunitinib: A Hypothetical, Illustrative Case Scenario.

Roethke SK, Ryan JC, Wood SY.

J Adv Pract Oncol. 2018 Jan-Feb;9(1):67-76. Epub 2018 Jan 1. Review.


Role of the Advanced Practice Provider in Clinical Trials: Contributions to the Management of Patients Receiving Inotuzumab Ozogamicin.

Welch MA, Ryan JC, Galinsky IA.

J Adv Pract Oncol. 2017 Sep-Oct;8(6):631-636. Epub 2017 Sep 1. Review. No abstract available.


Updates on managing advanced breast cancer with palbociclib combination therapy.

McShane TM, Wolfe TA, Ryan JC.

Ther Adv Med Oncol. 2018 Sep 3;10:1758835918793849. doi: 10.1177/1758835918793849. eCollection 2018. Review. Erratum in: Ther Adv Med Oncol. 2018 Dec 03;10:1758835918810117.


Research methods and reporting practices in zoo and aquarium conservation-education evaluation.

Mellish S, Ryan JC, Pearson EL, Tuckey MR.

Conserv Biol. 2019 Feb;33(1):40-52. doi: 10.1111/cobi.13177. Epub 2018 Jul 25. Review.


Treatment of paediatric trigger finger: a systematic review and treatment algorithm.

Womack ME, Ryan JC, Shillingford-Cole V, Speicher S, Hogue GD.

J Child Orthop. 2018 Jun 1;12(3):209-217. doi: 10.1302/1863-2548.12.180058.


SHIP1 Deficiency in Inflammatory Bowel Disease Is Associated With Severe Crohn's Disease and Peripheral T Cell Reduction.

Fernandes S, Srivastava N, Sudan R, Middleton FA, Shergill AK, Ryan JC, Kerr WG.

Front Immunol. 2018 May 22;9:1100. doi: 10.3389/fimmu.2018.01100. eCollection 2018.


Dark zone of the Greenland Ice Sheet controlled by distributed biologically-active impurities.

Ryan JC, Hubbard A, Stibal M, Irvine-Fynn TD, Cook J, Smith LC, Cameron K, Box J.

Nat Commun. 2018 Mar 14;9(1):1065. doi: 10.1038/s41467-018-03353-2.


Identification of MHC Class Ib Ligands for Stimulatory and Inhibitory Ly49 Receptors and Induction of Potent NK Cell Alloresponses in Rats.

Dai KZ, Ryan JC, Naper C, Vaage JT.

J Immunol. 2018 Apr 15;200(8):2847-2859. doi: 10.4049/jimmunol.1701464. Epub 2018 Mar 12.


Memory T Cell Proliferation before Hepatitis C Virus Therapy Predicts Antiviral Immune Responses and Treatment Success.

Méndez-Lagares G, Lu D, Chen C, Terrault N, Segal MR, Khalili M, Monto A, Shen H, Manos MM, Lanier LL, Ryan JC, McCune JM, Hartigan-O'Connor DJ.

J Immunol. 2018 Feb 1;200(3):1124-1132. doi: 10.4049/jimmunol.1701364. Epub 2017 Dec 20.


Direct measurements of meltwater runoff on the Greenland ice sheet surface.

Smith LC, Yang K, Pitcher LH, Overstreet BT, Chu VW, Rennermalm ÅK, Ryan JC, Cooper MG, Gleason CJ, Tedesco M, Jeyaratnam J, van As D, van den Broeke MR, van de Berg WJ, Noël B, Langen PL, Cullather RI, Zhao B, Willis MJ, Hubbard A, Box JE, Jenner BA, Behar AE.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):E10622-E10631. doi: 10.1073/pnas.1707743114. Epub 2017 Dec 5. Erratum in: Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):E6097.


NKG2D ligand expression in Crohn's disease and NKG2D-dependent stimulation of CD8+ T cell migration.

Vadstrup K, Galsgaard ED, Jensen H, Lanier LL, Ryan JC, Chen SY, Nolan GP, Vester-Andersen MK, Pedersen JS, Gerwien J, Jensen T, Bendtsen F.

Exp Mol Pathol. 2017 Aug;103(1):56-70. doi: 10.1016/j.yexmp.2017.06.010. Epub 2017 Jul 3.


Using quantitative intravital multiphoton microscopy to dissect hepatic transport in rats.

Dunn KW, Ryan JC.

Methods. 2017 Sep 1;128:40-51. doi: 10.1016/j.ymeth.2017.04.015. Epub 2017 Apr 21.


Palbociclib Plus Letrozole for the Treatment of Metastatic Breast Cancer: An Illustrative Case Scenario.

Orbaugh K, Ryan JC, Pfeuffer L.

J Adv Pract Oncol. 2016 Jul-Aug;7(5):550-561. Epub 2016 Jul 1. Review.


IL-33 promotes growth and liver metastasis of colorectal cancer in mice by remodeling the tumor microenvironment and inducing angiogenesis.

Zhang Y, Davis C, Shah S, Hughes D, Ryan JC, Altomare D, Peña MM.

Mol Carcinog. 2017 Jan;56(1):272-287. doi: 10.1002/mc.22491. Epub 2016 Apr 27.


Improved Survival Among all Interferon-α-Treated Patients in HCV-002, a Veterans Affairs Hepatitis C Cohort of 2211 Patients, Despite Increased Cirrhosis Among Nonresponders.

Cozen ML, Ryan JC, Shen H, Cheung R, Kaplan DE, Pocha C, Brau N, Aytaman A, Schmidt WN, Pedrosa M, Anand BS, Chang KM, Morgan T, Monto A.

Dig Dis Sci. 2016 Jun;61(6):1744-56. doi: 10.1007/s10620-016-4122-5. Epub 2016 Apr 8.


Protective association of colonoscopy against proximal and distal colon cancer and patterns in interval cancer.

Shergill AK, Conners EE, McQuaid KR, Epstein S, Ryan JC, Shah JN, Inadomi J, Somsouk M.

Gastrointest Endosc. 2015 Sep;82(3):529-37.e1. doi: 10.1016/j.gie.2015.01.053. Epub 2015 May 1.


Microarray applications to understand the impact of exposure to environmental contaminants in wild dolphins (Tursiops truncatus).

Mancia A, Abelli L, Kucklick JR, Rowles TK, Wells RS, Balmer BC, Hohn AA, Baatz JE, Ryan JC.

Mar Genomics. 2015 Feb;19:47-57. doi: 10.1016/j.margen.2014.11.002. Epub 2014 Nov 17.


Effects of chronic kidney disease on liver transport: quantitative intravital microscopy of fluorescein transport in the rat liver.

Ryan JC, Dunn KW, Decker BS.

Am J Physiol Regul Integr Comp Physiol. 2014 Dec 15;307(12):R1488-92. doi: 10.1152/ajpregu.00371.2014. Epub 2014 Oct 22.


Structural brain abnormalities in patients with inflammatory illness acquired following exposure to water-damaged buildings: a volumetric MRI study using NeuroQuant®.

Shoemaker RC, House D, Ryan JC.

Neurotoxicol Teratol. 2014 Sep-Oct;45:18-26. doi: 10.1016/ Epub 2014 Jun 17.


Machine learning approaches to investigate the impact of PCBs on the transcriptome of the common bottlenose dolphin (Tursiops truncatus).

Mancia A, Ryan JC, Van Dolah FM, Kucklick JR, Rowles TK, Wells RS, Rosel PE, Hohn AA, Schwacke LH.

Mar Environ Res. 2014 Sep;100:57-67. doi: 10.1016/j.marenvres.2014.03.007. Epub 2014 Mar 20.


Expanded use of aggressive therapies improves survival in early and intermediate hepatocellular carcinoma.

Ho EY, Cozen ML, Shen H, Lerrigo R, Trimble E, Ryan JC, Corvera CU, Monto A; HOVAS Group (Hepatocellular Carcinoma Treatment Outcome at VA San Francisco).

HPB (Oxford). 2014 Aug;16(8):758-67. doi: 10.1111/hpb.12214. Epub 2014 Jan 28.


Monocyte activation by interferon α is associated with failure to achieve a sustained virologic response after treatment for hepatitis C virus infection.

Hartigan-O'Connor DJ, Lin D, Ryan JC, Shvachko VA, Cozen ML, Segal MR, Terrault NA, Lanier LL, Manos MM, McCune JM.

J Infect Dis. 2014 May 15;209(10):1602-12. doi: 10.1093/infdis/jit801. Epub 2013 Dec 10.


Comparing the performance of expert user heuristics and an integer linear program in aircraft carrier deck operations.

Ryan JC, Banerjee AG, Cummings ML, Roy N.

IEEE Trans Cybern. 2014 Jun;44(6):761-73. doi: 10.1109/TCYB.2013.2271694. Epub 2013 Aug 7.


Transcriptomic responses of juvenile Pacific whiteleg shrimp, Litopenaeus vannamei, to hypoxia and hypercapnic hypoxia.

Rathburn CK, Sharp NJ, Ryan JC, Neely MG, Cook M, Chapman RW, Burnett LE, Burnett KG.

Physiol Genomics. 2013 Sep 3;45(17):794-807. doi: 10.1152/physiolgenomics.00043.2013. Epub 2013 Jul 2.


Nonresponse to interferon-α based treatment for chronic hepatitis C infection is associated with increased hazard of cirrhosis.

Cozen ML, Ryan JC, Shen H, Lerrigo R, Yee RM, Sheen E, Wu R, Monto A.

PLoS One. 2013 Apr 25;8(4):e61568. doi: 10.1371/journal.pone.0061568. Print 2013.


Impaired lymphocyte reactivity measured by immune function testing in untransplanted patients with cirrhosis.

Yee RM, Lehil MS, Rongey C, Shen H, Cozen ML, Monto A, Ryan JC.

Clin Vaccine Immunol. 2013 Apr;20(4):526-9. doi: 10.1128/CVI.00595-12. Epub 2013 Feb 6.


Predictors of practice patterns for lymphedema care among oncology advanced practice nurses.

Ryan JC, Cleland CM, Fu MR.

J Adv Pract Oncol. 2012 Sep;3(5):307-18. Review.


Transcriptome remodeling associated with chronological aging in the dinoflagellate, Karenia brevis.

Johnson JG, Morey JS, Neely MG, Ryan JC, Van Dolah FM.

Mar Genomics. 2012 Mar;5:15-25. doi: 10.1016/j.margen.2011.08.005. Epub 2011 Sep 22.


Health status, infection and disease in California sea lions (Zalophus californianus) studied using a canine microarray platform and machine-learning approaches.

Mancia A, Ryan JC, Chapman RW, Wu Q, Warr GW, Gulland FM, Van Dolah FM.

Dev Comp Immunol. 2012 Apr;36(4):629-37. doi: 10.1016/j.dci.2011.10.011. Epub 2011 Oct 31.


The rat NK cell receptors Ly49s4 and Ly49i4 recognize nonclassical MHC-I molecules on Listeria monocytogenes-infected macrophages.

Shegarfi H, Dai KZ, Daws MR, Ryan JC, Vaage JT, Rolstad B, Naper C.

J Leukoc Biol. 2011 Apr;89(4):617-23. doi: 10.1189/jlb.1010593. Epub 2011 Jan 19.


The activating rat Ly49s5 receptor responds to increased levels of MHC class Ib molecules on Listeria monocytogenes-infected enteric epithelial cells.

Shegarfi H, Dai KZ, Inngjerdingen M, Ryan JC, Vaage JT, Rolstad B, Naper C.

Eur J Immunol. 2010 Dec;40(12):3535-43. doi: 10.1002/eji.201040651. Epub 2010 Nov 11.


Effects of COX inhibitors on neurodegeneration and survival in mice exposed to the marine neurotoxin domoic acid.

Ryan JC, Cross CA, Van Dolah FM.

Neurosci Lett. 2011 Jan 3;487(1):83-7. doi: 10.1016/j.neulet.2010.10.001. Epub 2010 Oct 8.


Gene expression profiling in brain of mice exposed to the marine neurotoxin ciguatoxin reveals an acute anti-inflammatory, neuroprotective response.

Ryan JC, Morey JS, Bottein MY, Ramsdell JS, Van Dolah FM.

BMC Neurosci. 2010 Aug 26;11:107. doi: 10.1186/1471-2202-11-107.


Defining the neurotoxin derived illness chronic ciguatera using markers of chronic systemic inflammatory disturbances: a case/control study.

Shoemaker RC, House D, Ryan JC.

Neurotoxicol Teratol. 2010 Nov-Dec;32(6):633-9. doi: 10.1016/ Epub 2010 Jun 4.


Binding and uptake of H-ferritin are mediated by human transferrin receptor-1.

Li L, Fang CJ, Ryan JC, Niemi EC, Lebrón JA, Björkman PJ, Arase H, Torti FM, Torti SV, Nakamura MC, Seaman WE.

Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3505-10. doi: 10.1073/pnas.0913192107. Epub 2010 Feb 4.


Sudden hearing loss following non-petrous craniotomy.

Ryan JC, Bird PA, Bonkowski JA.

J Clin Neurosci. 2010 Jan;17(1):146-9. doi: 10.1016/j.jocn.2009.02.037. Epub 2009 Nov 3.


Pinch force and forearm-muscle load during routine colonoscopy: a pilot study.

Shergill AK, Asundi KR, Barr A, Shah JN, Ryan JC, McQuaid KR, Rempel D.

Gastrointest Endosc. 2009 Jan;69(1):142-6. doi: 10.1016/j.gie.2008.09.030.


Beyond insulin resistance: Innate immunity in nonalcoholic steatohepatitis.

Maher JJ, Leon P, Ryan JC.

Hepatology. 2008 Aug;48(2):670-8. doi: 10.1002/hep.22399. Review.


Liver genomic responses to ciguatoxin: evidence for activation of phase I and phase II detoxification pathways following an acute hypothermic response in mice.

Morey JS, Ryan JC, Bottein Dechraoui MY, Rezvani AH, Levin ED, Gordon CJ, Ramsdell JS, Van Dolah FM.

Toxicol Sci. 2008 Jun;103(2):298-310. doi: 10.1093/toxsci/kfn055. Epub 2008 Mar 18.


Role of cricothyroid cannulation in head and neck surgery.

Ryan JC, McGuire B.

J Laryngol Otol. 2008 Oct;122(10):1096-9. doi: 10.1017/S0022215107001594. Epub 2008 Feb 20.


Transcriptional profiling and inhibition of cholesterol biosynthesis in human T lymphocyte cells by the marine toxin azaspiracid.

Twiner MJ, Ryan JC, Morey JS, Smith KJ, Hammad SM, Van Dolah FM, Hess P, McMahon T, Satake M, Yasumoto T, Doucette GJ.

Genomics. 2008 Mar;91(3):289-300. doi: 10.1016/j.ygeno.2007.10.015. Epub 2008 Jan 11.


Bleomycin-induced "flagellate dermatitis".

Arseculeratne G, Berroeta L, Meiklejohn D, Mountain RE, Ryan JC, Spinou C, Das SN, Evans AT, Lowe JG.

Arch Dermatol. 2007 Nov;143(11):1461-2. No abstract available.


A prospective study to examine persistent HCV reinfection in injection drug users who have previously cleared the virus.

Currie SL, Ryan JC, Tracy D, Wright TL, George S, McQuaid R, Kim M, Shen H, Monto A.

Drug Alcohol Depend. 2008 Jan 11;93(1-2):148-54. Epub 2007 Oct 30. Erratum in: Drug Alcohol Depend. 2008 Jul;96(1-2):192.


Transcriptional profiling of whole blood and serum protein analysis of mice exposed to the neurotoxin Pacific Ciguatoxin-1.

Ryan JC, Bottein Dechraoui MY, Morey JS, Rezvani A, Levin ED, Gordon CJ, Ramsdell JS, Van Dolah FM.

Neurotoxicology. 2007 Nov;28(6):1099-109. Epub 2007 Jun 16.


Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR.

Morey JS, Ryan JC, Van Dolah FM.

Biol Proced Online. 2006;8:175-93. Epub 2006 Dec 12.


Strain-dependent expression of four structurally related rat Ly49 receptors; correlation with NK gene complex haplotype and NK alloreactivity.

Kveberg L, Dai KZ, Dissen E, Ryan JC, Rolstad B, Vaage JT, Naper C.

Immunogenetics. 2006 Nov;58(11):905-16. Epub 2006 Oct 7.


The novel inhibitory NKR-P1C receptor and Ly49s3 identify two complementary, functionally distinct NK cell subsets in rats.

Kveberg L, Bäck CJ, Dai KZ, Inngjerdingen M, Rolstad B, Ryan JC, Vaage JT, Naper C.

J Immunol. 2006 Apr 1;176(7):4133-40.

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