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Author Correction: Interaction between the microbiome and TP53 in human lung cancer.

Greathouse KL, White JR, Vargas AJ, Bliskovsky VV, Beck JA, von Muhlinen N, Polley EC, Bowman ED, Khan MA, Robles AI, Cooks T, Ryan BM, Padgett N, Dzutsev AH, Trinchieri G, Pineda MA, Bilke S, Meltzer PS, Hokenstad AN, Stickrod TM, Walther-Antonio MR, Earl JP, Mell JC, Krol JE, Balashov SV, Bhat AS, Ehrlich GD, Valm A, Deming C, Conlan S, Oh J, Segre JA, Harris CC.

Genome Biol. 2020 Feb 20;21(1):41. doi: 10.1186/s13059-020-01961-0.


Author Correction: Recurrent PTPRT/JAK2 mutations in lung adenocarcinoma among African Americans.

Mitchell KA, Nichols N, Tang W, Walling J, Stevenson H, Pineda M, Stefanescu R, Edelman DC, Girvin AT, Zingone A, Sinha S, Bowman E, Rossi EL, Arauz RF, Zhu YJ, Lack J, Weingartner E, Waterfall JJ, Pine SR, Simmons J, Meltzer P, Ryan BM.

Nat Commun. 2020 Jan 30;11(1):700. doi: 10.1038/s41467-020-14448-0.


Recurrent PTPRT/JAK2 mutations in lung adenocarcinoma among African Americans.

Mitchell KA, Nichols N, Tang W, Walling J, Stevenson H, Pineda M, Stefanescu R, Edelman DC, Girvin AT, Zingone A, Sinha S, Bowman E, Rossi EL, Arauz RF, Jack Zhu Y, Lack J, Weingartner E, Waterfall JJ, Pine SR, Simmons J, Meltzer P, Ryan BM.

Nat Commun. 2019 Dec 16;10(1):5735. doi: 10.1038/s41467-019-13732-y. Erratum in: Nat Commun. 2020 Jan 30;11(1):700.


Autoimmune pancreatitis in a child: a challenging diagnosis.

King G, O'Toole E, O'Hare K, Ryan BM, Elnazir B, Quinn S.

Arch Dis Child. 2019 Nov 13. pii: archdischild-2019-318287. doi: 10.1136/archdischild-2019-318287. [Epub ahead of print] No abstract available.


Relationship between West African ancestry with lung cancer risk and survival in African Americans.

Mitchell KA, Shah E, Bowman ED, Zingone A, Nichols N, Pine SR, Kittles RA, Ryan BM.

Cancer Causes Control. 2019 Nov;30(11):1259-1268. doi: 10.1007/s10552-019-01212-z. Epub 2019 Aug 29.


Body Mass Index (BMI), BMI Change, and Overall Survival in Patients With SCLC and NSCLC: A Pooled Analysis of the International Lung Cancer Consortium.

Shepshelovich D, Xu W, Lu L, Fares A, Yang P, Christiani D, Zhang J, Shiraishi K, Ryan BM, Chen C, Schwartz AG, Tardon A, Wu X, Schabath MB, Teare MD, Le Marchand L, Zhang ZF, Field JK, Brenner H, Diao N, Xie J, Kohno T, Harris CC, Wenzlaff AS, Fernandez-Tardon G, Ye Y, Taylor F, Wilkens LR, Davies M, Liu Y, Barnett MJ, Goodman GE, Morgenstern H, Holleczek B, Brown MC, Liu G, Hung RJ.

J Thorac Oncol. 2019 Sep;14(9):1594-1607. doi: 10.1016/j.jtho.2019.05.031. Epub 2019 Jun 1. Erratum in: J Thorac Oncol. 2019 Nov;14(11):2024.


Lung Cancer Risk in Never-Smokers of European Descent is Associated With Genetic Variation in the 5p15.33 TERT-CLPTM1Ll Region.

Hung RJ, Spitz MR, Houlston RS, Schwartz AG, Field JK, Ying J, Li Y, Han Y, Ji X, Chen W, Wu X, Gorlov IP, Na J, de Andrade M, Liu G, Brhane Y, Diao N, Wenzlaff A, Davies MPA, Liloglou T, Timofeeva M, Muley T, Rennert H, Saliba W, Ryan BM, Bowman E, Barros-Dios JM, Pérez-Ríos M, Morgenstern H, Zienolddiny S, Skaug V, Ugolini D, Bonassi S, van der Heijden EHFM, Tardon A, Bojesen SE, Landi MT, Johansson M, Bickeböller H, Arnold S, Le Marchand L, Melander O, Andrew A, Grankvist K, Caporaso N, Teare MD, Schabath MB, Aldrich MC, Kiemeney LA, Wichmann HE, Lazarus P, Mayordomo J, Neri M, Haugen A, Zhang ZF, Ruano-Raviña A, Brenner H, Harris CC, Orlow I, Rennert G, Risch A, Brennan P, Christiani DC, Amos CI, Yang P, Gorlova OY.

J Thorac Oncol. 2019 Aug;14(8):1360-1369. doi: 10.1016/j.jtho.2019.04.008. Epub 2019 Apr 19.


Adherence to European Polypectomy Guidelines: Retrospective Experience from a Tertiary Irish Hospital.

Parihar V, Sopheno-Falco J, Maheshwari P, O'Moran N, Graziadei V, O'Grady Walshe A, O'Dwyer O, Kumar L, Fennessy S, Breslin N, Ryan BM, McNamara D.

Gastrointest Tumors. 2019 Feb;5(3-4):82-89. doi: 10.1159/000494351. Epub 2018 Nov 22.


Circulating Inflammation Proteins Associated With Lung Cancer in African Americans.

Meaney CL, Mitchell KA, Zingone A, Brown D, Bowman E, Yu Y, Wenzlaff AS, Neslund-Dudas C, Pine SR, Cao L, Schwartz AG, Ryan BM.

J Thorac Oncol. 2019 Jul;14(7):1192-1203. doi: 10.1016/j.jtho.2019.03.014. Epub 2019 Apr 3.


Prenatal smoke exposure, DNA methylation and a link between DRD1 and lung cancer.

Ryan BM, Robles AI.

Int J Epidemiol. 2019 Aug 1;48(4):1377-1378. doi: 10.1093/ije/dyz035. No abstract available.


Extracranial and Intracranial Vasculopathy With "Moyamoya Phenomenon" in Association With Alagille Syndrome.

Delaney S, O'Connor G, Reardon W, Murphy SJX, Tierney S, Ryan BM, Delaney H, Doherty CP, Guiney M, Brennan P, Tobin WO, McCabe DJH.

Front Neurol. 2019 Jan 29;9:1194. doi: 10.3389/fneur.2018.01194. eCollection 2018.


A Case of Primary Gastric Melanoma Exhibiting a Rare BRAF V600R Mutation.

Callaghan GM, Kelleher FC, Ridgway PF, Crowther S, Alakkari A, Ryan BM.

Eur J Case Rep Intern Med. 2018 Mar 21;5(3):000749. doi: 10.12890/2018_000749. eCollection 2018.


The future of nanomedicine in optimising the treatment of inflammatory bowel disease.

Mohan LJ, Daly JS, Ryan BM, Ramtoola Z.

Scand J Gastroenterol. 2019 Jan;54(1):18-26. doi: 10.1080/00365521.2018.1563805. Epub 2019 Jan 24. Review.


IFNL4-ΔG is associated with prostate cancer among men at increased risk of sexually transmitted infections.

Minas TZ, Tang W, Smith CJ, Onabajo OO, Obajemu A, Dorsey TH, Jordan SV, Obadi OM, Ryan BM, Prokunina-Olsson L, Loffredo CA, Ambs S.

Commun Biol. 2018 Nov 14;1:191. doi: 10.1038/s42003-018-0193-5. eCollection 2018.


Identifying therapeutic vulnerabilities in lung cancer: application of a chemistry-first approach.

Pine SR, Ryan BM.

Transl Lung Cancer Res. 2018 Sep;7(Suppl 3):S265-S269. doi: 10.21037/tlcr.2018.09.10. No abstract available.


Elevated Serum Megakaryocyte Potentiating Factor as a Predictor of Poor Survival in Patients with Mesothelioma and Primary Lung Cancer.

Yu Y, Ryan BM, Thomas A, Morrow B, Zhang J, Kang Z, Zingone A, Onda M, Hassan R, Pastan I, Cao L.

J Appl Lab Med. 2018 Sep;3(2):166-177. doi: 10.1373/jalm.2017.025015.


Relationship between Circulating Inflammation Proteins and Lung Cancer Diagnosis in the National Lung Screening Trial.

Brown D, Zingone A, Yu Y, Zhu B, Candia J, Cao L, Ryan BM.

Cancer Epidemiol Biomarkers Prev. 2019 Jan;28(1):110-118. doi: 10.1158/1055-9965.EPI-18-0598. Epub 2018 Oct 8.


Racial and Ethnic Differences in the Relationship between Aspirin Use and Non-Small Cell Lung Cancer Risk and Survival.

Erickson P, Gardner LD, Loffredo CA, St George DM, Bowman ED, Deepak J, Mitchell K, Meaney CL, Langenberg P, Bernat DH, Amr S, Ryan BM.

Cancer Epidemiol Biomarkers Prev. 2018 Dec;27(12):1518-1526. doi: 10.1158/1055-9965.EPI-18-0366. Epub 2018 Aug 31.


Interaction between the microbiome and TP53 in human lung cancer.

Greathouse KL, White JR, Vargas AJ, Bliskovsky VV, Beck JA, von Muhlinen N, Polley EC, Bowman ED, Khan MA, Robles AI, Cooks T, Ryan BM, Padgett N, Dzutsev AH, Trinchieri G, Pineda MA, Bilke S, Meltzer PS, Hokenstad AN, Stickrod TM, Walther-Antonio MR, Earl JP, Mell JC, Krol JE, Balashov SV, Bhat AS, Ehrlich GD, Valm A, Deming C, Conlan S, Oh J, Segre JA, Harris CC.

Genome Biol. 2018 Aug 24;19(1):123. doi: 10.1186/s13059-018-1501-6. Erratum in: Genome Biol. 2020 Feb 20;21(1):41.


Rickettsia Species Isolated from Dermacentor occidentalis (Acari: Ixodidae) from California.

Paddock CD, Yoshimizu MH, Zambrano ML, Lane RS, Ryan BM, Espinosa A, Hacker JK, Karpathy SE, Padgett KA.

J Med Entomol. 2018 Oct 25;55(6):1555-1560. doi: 10.1093/jme/tjy100. Erratum in: J Med Entomol. 2018 Oct 25;55(6):1664.


Stressing the need to overcome EGFR tyrosine kinase inhibitor resistance.

Toulabi L, Ryan BM.

Transl Lung Cancer Res. 2018 Apr;7(Suppl 2):S123-S126. doi: 10.21037/tlcr.2018.03.05. No abstract available.


Inverse association of vitamin D3 levels with lung cancer mediated by genetic variation.

Haznadar M, Krausz KW, Margono E, Diehl CM, Bowman ED, Manna SK, Robles AI, Ryan BM, Gonzalez FJ, Harris CC.

Cancer Med. 2018 Jun;7(6):2764-2775. doi: 10.1002/cam4.1444. Epub 2018 May 3.


Lung cancer health disparities.

Ryan BM.

Carcinogenesis. 2018 May 28;39(6):741-751. doi: 10.1093/carcin/bgy047. Review.


The prevalence of small intestinal bacterial overgrowth in non-surgical patients with chronic pancreatitis and pancreatic exocrine insufficiency (PEI).

Ní Chonchubhair HM, Bashir Y, Dobson M, Ryan BM, Duggan SN, Conlon KC.

Pancreatology. 2018 Jun;18(4):379-385. doi: 10.1016/j.pan.2018.02.010. Epub 2018 Feb 24.


Histologic Lung Cancer Incidence Rates and Trends Vary by Race/Ethnicity and Residential County.

Houston KA, Mitchell KA, King J, White A, Ryan BM.

J Thorac Oncol. 2018 Apr;13(4):497-509. doi: 10.1016/j.jtho.2017.12.010. Epub 2018 Jan 31.


Comparative Transcriptome Profiling Reveals Coding and Noncoding RNA Differences in NSCLC from African Americans and European Americans.

Mitchell KA, Zingone A, Toulabi L, Boeckelman J, Ryan BM.

Clin Cancer Res. 2017 Dec 1;23(23):7412-7425. doi: 10.1158/1078-0432.CCR-17-0527.


Assessment of Variability in the SOMAscan Assay.

Candia J, Cheung F, Kotliarov Y, Fantoni G, Sellers B, Griesman T, Huang J, Stuccio S, Zingone A, Ryan BM, Tsang JS, Biancotto A.

Sci Rep. 2017 Oct 27;7(1):14248. doi: 10.1038/s41598-017-14755-5.


Relationship between anti-depressant use and lung cancer survival.

Zingone A, Brown D, Bowman ED, Vidal O, Sage J, Neal J, Ryan BM.

Cancer Treat Res Commun. 2017;10:33-39. doi: 10.1016/j.ctarc.2017.01.001. Epub 2017 Jan 29.


The potential role of gut microbiota in pancreatic disease: A systematic review.

Memba R, Duggan SN, Ni Chonchubhair HM, Griffin OM, Bashir Y, O'Connor DB, Murphy A, McMahon J, Volcov Y, Ryan BM, Conlon KC.

Pancreatology. 2017 Nov - Dec;17(6):867-874. doi: 10.1016/j.pan.2017.09.002. Epub 2017 Sep 6. Review.


microRNAs in Cancer Susceptibility.

Ryan BM.

Adv Cancer Res. 2017;135:151-171. doi: 10.1016/bs.acr.2017.06.004. Epub 2017 Aug 4. Review.


Abundance and Bloodfeeding Patterns of Mosquitoes (Diptera: Culicidae) in an Oak Woodland on the Eastern Slope of the Northern Coast Range of California.

Thiemann TC, Woodward DL, Fang Y, Ryan BM, Nelms BM, Scott JJ, Reisen WK.

J Med Entomol. 2017 Sep 1;54(5):1344-1353. doi: 10.1093/jme/tjx078.


Clinical Outcome of Patients with Raised Intraepithelial Lymphocytes with Normal Villous Architecture on Duodenal Biopsy.

Parihar V, Stack R, Alakkari A, Breslin N, Ryan BM, Crowther S, McNamara D.

Digestion. 2017;95(4):288-292. doi: 10.1159/000476061. Epub 2017 May 17.


Post-ERCP Emphysematous Cholecystitis in a Young Woman: A Rare and Potentially Fatal Complication.

Stack R, McLoughlin J, Gillis A, Ryan BM.

Case Rep Gastrointest Med. 2017;2017:1971457. doi: 10.1155/2017/1971457. Epub 2017 Mar 21.


Identification of serum inflammatory markers as classifiers of lung cancer mortality for stage I adenocarcinoma.

Meaney CL, Zingone A, Brown D, Yu Y, Cao L, Ryan BM.

Oncotarget. 2017 Jun 20;8(25):40946-40957. doi: 10.18632/oncotarget.16784.


Picky eaters are rare: DNA-based blood meal analysis of Culicoides (Diptera: Ceratopogonidae) species from the United States.

Hopken MW, Ryan BM, Huyvaert KP, Piaggio AJ.

Parasit Vectors. 2017 Apr 4;10(1):169. doi: 10.1186/s13071-017-2099-3.


The role of endoscopic intervention in the management of inflammatory pancreatic fluid collections.

Parihar V, Ridgway PF, Conlon KC, Huggett M, Ryan BM.

Eur J Gastroenterol Hepatol. 2017 Apr;29(4):371-379. doi: 10.1097/MEG.0000000000000818. Review.


Safety of lumen-apposing metal stents (LAMS) for pancreatic fluid collection drainage.

Ryan BM, Venkatachalapathy SV, Huggett MT; UK and Ireland Hot AXIOS Study Group; UK and Ireland Hot AXIOS Study Group.

Gut. 2017 Aug;66(8):1530-1531. doi: 10.1136/gutjnl-2016-313388. Epub 2016 Dec 16. No abstract available.


MDM2 promoter SNP55 (rs2870820) affects risk of colon cancer but not breast-, lung-, or prostate cancer.

Helwa R, Gansmo LB, Romundstad P, Hveem K, Vatten L, Ryan BM, Harris CC, Lønning PE, Knappskog S.

Sci Rep. 2016 Sep 14;6:33153. doi: 10.1038/srep33153.


A Two-Gene Prognostic Classifier for Early-Stage Lung Squamous Cell Carcinoma in Multiple Large-Scale and Geographically Diverse Cohorts.

Noro R, Ishigame T, Walsh N, Shiraishi K, Robles AI, Ryan BM, Schetter AJ, Bowman ED, Welsh JA, Seike M, Gemma A, Skaug V, Mollerup S, Haugen A, Yokota J, Kohno T, Harris CC.

J Thorac Oncol. 2017 Jan;12(1):65-76. doi: 10.1016/j.jtho.2016.08.141. Epub 2016 Sep 6.


A 1-year prospective study of the effect of infliximab on bone metabolism in inflammatory bowel disease patients.

Veerappan SG, Healy M, Walsh B, O'Morain CA, Daly JS, Ryan BM.

Eur J Gastroenterol Hepatol. 2016 Nov;28(11):1335-44. doi: 10.1097/MEG.0000000000000719.


Bionomics and Vector Potential of Culex thriambus (Diptera: Culicidae) Mosquitoes in Lake County, California.

Nelms BM, Thiemann TC, Bridges DN, Williams AE, Koschik ML, Ryan BM, Scott JJ.

J Med Entomol. 2016 Nov;53(6):1473-1481. Epub 2016 Aug 4.


Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population.

Zanetti KA, Wang Z, Aldrich M, Amos CI, Blot WJ, Bowman ED, Burdette L, Cai Q, Caporaso N, Chung CC, Gillanders EM, Haiman CA, Hansen HM, Henderson BE, Kolonel LN, Marchand LL, Li S, McNeill LH, Ryan BM, Schwartz AG, Sison JD, Spitz MR, Tucker M, Wenzlaff AS, Wiencke JK, Wilkens L, Wrensch MR, Wu X, Zheng W, Zhou W, Christiani D, Palmer JR, Penning TM, Rieber AG, Rosenberg L, Ruiz-Narvaez EA, Su L, Vachani A, Wei Y, Whitehead AS, Chanock SJ, Harris CC.

Lung Cancer. 2016 Aug;98:33-42. doi: 10.1016/j.lungcan.2016.05.008. Epub 2016 May 13.


Associations between the MDM2 promoter P1 polymorphism del1518 (rs3730485) and incidence of cancer of the breast, lung, colon and prostate.

Gansmo LB, Vatten L, Romundstad P, Hveem K, Ryan BM, Harris CC, Knappskog S, Lønning PE.

Oncotarget. 2016 May 10;7(19):28637-46. doi: 10.18632/oncotarget.8705.


The hallmarks of premalignant conditions: a molecular basis for cancer prevention.

Ryan BM, Faupel-Badger JM.

Semin Oncol. 2016 Feb;43(1):22-35. doi: 10.1053/j.seminoncol.2015.09.007. Epub 2015 Sep 8. Review.


Differential Serum Cytokine Levels and Risk of Lung Cancer Between African and European Americans.

Pine SR, Mechanic LE, Enewold L, Bowman ED, Ryan BM, Cote ML, Wenzlaff AS, Loffredo CA, Olivo-Marston S, Chaturvedi A, Caporaso NE, Schwartz AG, Harris CC.

Cancer Epidemiol Biomarkers Prev. 2016 Mar;25(3):488-97. doi: 10.1158/1055-9965.EPI-15-0378. Epub 2015 Dec 28.


KRT81 miR-SNP rs3660 is associated with risk and survival of NSCLC.

Robles AI, Ryan BM.

Ann Oncol. 2016 Feb;27(2):360-1. doi: 10.1093/annonc/mdv552. Epub 2015 Nov 16. No abstract available.


Adalimumab Therapy Has a Beneficial Effect on Bone Metabolism in Patients with Crohn's Disease.

Veerappan SG, Healy M, Walsh BJ, O'Morain CA, Daly JS, Ryan BM.

Dig Dis Sci. 2015 Jul;60(7):2119-29. doi: 10.1007/s10620-015-3606-z. Epub 2015 Mar 3.


Identification of a functional SNP in the 3'UTR of CXCR2 that is associated with reduced risk of lung cancer.

Ryan BM, Robles AI, McClary AC, Haznadar M, Bowman ED, Pine SR, Brown D, Khan M, Shiraishi K, Kohno T, Okayama H, Modali R, Yokota J, Harris CC.

Cancer Res. 2015 Feb 1;75(3):566-75. doi: 10.1158/0008-5472.CAN-14-2101. Epub 2014 Dec 5.


A DRD1 polymorphism predisposes to lung cancer among those exposed to secondhand smoke during childhood.

Robles AI, Yang P, Jen J, McClary AC, Calhoun K, Bowman ED, Vähäkangas K, Greathouse KL, Wang Y, Olivo-Marston S, Wenzlaff AS, Deng B, Schwartz AG, Ryan BM.

Cancer Prev Res (Phila). 2014 Dec;7(12):1210-8. doi: 10.1158/1940-6207.CAPR-14-0158. Epub 2014 Oct 3.

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