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Genotyping-in-Thousands by sequencing (GT-seq) panel development and application to minimally-invasive DNA samples to support studies in molecular ecology.

Schmidt D, Campbell NR, Govindarajulu P, Larsen KW, Russello MA.

Mol Ecol Resour. 2019 Sep 4. doi: 10.1111/1755-0998.13090. [Epub ahead of print]


Patterns, Mechanisms and Genetics of Speciation in Reptiles and Amphibians.

Wollenberg Valero KC, Marshall JC, Bastiaans E, Caccone A, Camargo A, Morando M, Niemiller ML, Pabijan M, Russello MA, Sinervo B, Werneck FP, Sites JW; Jr, Wiens JJ, Steinfartz S.

Genes (Basel). 2019 Aug 26;10(9). pii: E646. doi: 10.3390/genes10090646. Review.


Genetically informed captive breeding of hybrids of an extinct species of Galapagos tortoise.

Quinzin MC, Sandoval-Castillo J, Miller JM, Beheregaray LB, Russello MA, Hunter EA, Gibbs JP, Tapia W, Villalva F, Caccone A.

Conserv Biol. 2019 Mar 22. doi: 10.1111/cobi.13319. [Epub ahead of print]


Giant tortoise genomes provide insights into longevity and age-related disease.

Quesada V, Freitas-Rodríguez S, Miller J, Pérez-Silva JG, Jiang ZF, Tapia W, Santiago-Fernández O, Campos-Iglesias D, Kuderna LFK, Quinzin M, Álvarez MG, Carrero D, Beheregaray LB, Gibbs JP, Chiari Y, Glaberman S, Ciofi C, Araujo-Voces M, Mayoral P, Arango JR, Tamargo-Gómez I, Roiz-Valle D, Pascual-Torner M, Evans BR, Edwards DL, Garrick RC, Russello MA, Poulakakis N, Gaughran SJ, Rueda DO, Bretones G, Marquès-Bonet T, White KP, Caccone A, López-Otín C.

Nat Ecol Evol. 2019 Jan;3(1):87-95. doi: 10.1038/s41559-018-0733-x. Epub 2018 Dec 3.


Genetic evidence supports a distinct lineage of American crocodile (Crocodylus acutus) in the Greater Antilles.

Milián-García Y, Russello MA, Castellanos-Labarcena J, Cichon M, Kumar V, Espinosa G, Rossi N, Mazzotti F, Hekkala E, Amato G, Janke A.

PeerJ. 2018 Nov 12;6:e5836. doi: 10.7717/peerj.5836. eCollection 2018.


Population genomics through time provides insights into the consequences of decline and rapid demographic recovery through head-starting in a Galapagos giant tortoise.

Jensen EL, Edwards DL, Garrick RC, Miller JM, Gibbs JP, Cayot LJ, Tapia W, Caccone A, Russello MA.

Evol Appl. 2018 Aug 13;11(10):1811-1821. doi: 10.1111/eva.12682. eCollection 2018 Dec.


Disentangling the genetic effects of refugial isolation and range expansion in a trans-continentally distributed species.

Reid BN, Kass JM, Wollney S, Jensen EL, Russello MA, Viola EM, Pantophlet J, Iverson JB, Peery MZ, Raxworthy CJ, Naro-Maciel E.

Heredity (Edinb). 2019 Apr;122(4):441-457. doi: 10.1038/s41437-018-0135-5. Epub 2018 Aug 31.


Theory, practice, and conservation in the age of genomics: The Galápagos giant tortoise as a case study.

Gaughran SJ, Quinzin MC, Miller JM, Garrick RC, Edwards DL, Russello MA, Poulakakis N, Ciofi C, Beheregaray LB, Caccone A.

Evol Appl. 2017 Oct 23;11(7):1084-1093. doi: 10.1111/eva.12551. eCollection 2018 Aug.


Genome-Wide Assessment of Diversity and Divergence Among Extant Galapagos Giant Tortoise Species.

Miller JM, Quinzin MC, Edwards DL, Eaton DAR, Jensen EL, Russello MA, Gibbs JP, Tapia W, Rueda D, Caccone A.

J Hered. 2018 Aug 24;109(6):611-619. doi: 10.1093/jhered/esy031.


Adaptive population divergence and directional gene flow across steep elevational gradients in a climate-sensitive mammal.

Waterhouse MD, Erb LP, Beever EA, Russello MA.

Mol Ecol. 2018 Jun;27(11):2512-2528. doi: 10.1111/mec.14701. Epub 2018 May 15.


Temporal Mitogenomics of the Galapagos Giant Tortoise from Pinzón Reveals Potential Biases in Population Genetic Inference.

Jensen EL, Miller JM, Edwards DL, Garrick RC, Tapia W, Caccone A, Russello MA.

J Hered. 2018 Aug 24;109(6):631-640. doi: 10.1093/jhered/esy016.


Author Correction: Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provides Founders for Species Restoration Program.

Miller JM, Quinzin MC, Poulakakis N, Gibbs JP, Beheregaray LB, Garrick RC, Russello MA, Ciofi C, Edwards DL, Hunter EA, Tapia W, Rueda D, Carrión J, Valdivieso AA, Caccone A.

Sci Rep. 2018 Mar 12;8(1):4568. doi: 10.1038/s41598-018-22519-y.


Genomic Changes Associated with Reproductive and Migratory Ecotypes in Sockeye Salmon (Oncorhynchus nerka).

Veale AJ, Russello MA.

Genome Biol Evol. 2017 Oct 1;9(10):2921-2939. doi: 10.1093/gbe/evx215.


Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provide Founders for Species Restoration Program.

Miller JM, Quinzin MC, Poulakakis N, Gibbs JP, Beheregaray LB, Garrick RC, Russello MA, Ciofi C, Edwards DL, Hunter EA, Tapia W, Rueda D, Carrión J, Valdivieso AA, Caccone A.

Sci Rep. 2017 Sep 13;7(1):11471. doi: 10.1038/s41598-017-11516-2. Erratum in: Sci Rep. 2018 Mar 12;8(1):4568.


Individual-based analysis of hair corticosterone reveals factors influencing chronic stress in the American pika.

Waterhouse MD, Sjodin B, Ray C, Erb L, Wilkening J, Russello MA.

Ecol Evol. 2017 Apr 26;7(12):4099-4108. doi: 10.1002/ece3.3009. eCollection 2017 Jun.


An ancient selective sweep linked to reproductive life history evolution in sockeye salmon.

Veale AJ, Russello MA.

Sci Rep. 2017 May 11;7(1):1747. doi: 10.1038/s41598-017-01890-2.


Sockeye salmon repatriation leads to population re-establishment and rapid introgression with native kokanee.

Veale AJ, Russello MA.

Evol Appl. 2016 Oct 21;9(10):1301-1311. eCollection 2016 Dec.


I-HEDGE: determining the optimum complementary sets of taxa for conservation using evolutionary isolation.

Jensen EL, Mooers AØ, Caccone A, Russello MA.

PeerJ. 2016 Aug 23;4:e2350. doi: 10.7717/peerj.2350. eCollection 2016.


Description of a New Galapagos Giant Tortoise Species (Chelonoidis; Testudines: Testudinidae) from Cerro Fatal on Santa Cruz Island.

Poulakakis N, Edwards DL, Chiari Y, Garrick RC, Russello MA, Benavides E, Watkins-Colwell GJ, Glaberman S, Tapia W, Gibbs JP, Cayot LJ, Caccone A.

PLoS One. 2015 Oct 21;10(10):e0138779. doi: 10.1371/journal.pone.0138779. eCollection 2015.


Founded: Genetic Reconstruction of Lineage Diversity and Kinship Informs Ex situ Conservation of Cuban Amazon Parrots (Amazona leucocephala).

Milián-García Y, Jensen EL, Madsen J, Álvarez Alonso S, Serrano Rodríguez A, Espinosa López G, Russello MA.

J Hered. 2015;106 Suppl 1:573-9. doi: 10.1093/jhered/esv012.


From promise to practice: pairing non-invasive sampling with genomics in conservation.

Russello MA, Waterhouse MD, Etter PD, Johnson EA.

PeerJ. 2015 Jul 21;3:e1106. doi: 10.7717/peerj.1106. eCollection 2015.


Shared genetic diversity across the global invasive range of the monk parakeet suggests a common restricted geographic origin and the possibility of convergent selection.

Edelaar P, Roques S, Hobson EA, Gonçalves da Silva A, Avery ML, Russello MA, Senar JC, Wright TF, Carrete M, Tella JL.

Mol Ecol. 2015 May;24(9):2164-76. doi: 10.1111/mec.13157. Epub 2015 Apr 15.


Naturally rare versus newly rare: demographic inferences on two timescales inform conservation of Galápagos giant tortoises.

Garrick RC, Kajdacsi B, Russello MA, Benavides E, Hyseni C, Gibbs JP, Tapia W, Caccone A.

Ecol Evol. 2015 Feb;5(3):676-94. doi: 10.1002/ece3.1388. Epub 2015 Jan 13.


Genetic evidence for ecological divergence in kokanee salmon.

Lemay MA, Russello MA.

Mol Ecol. 2015 Feb;24(4):798-811. doi: 10.1111/mec.13066. Epub 2015 Feb 3.


Time scale matters: genetic analysis does not support adaptation-by-time as the mechanism for adaptive seasonal declines in kokanee reproductive life span.

Morbey YE, Jensen EL, Russello MA.

Ecol Evol. 2014 Sep;4(18):3714-22. doi: 10.1002/ece3.1214. Epub 2014 Sep 5.


Genetic evidence of hybridization between the critically endangered Cuban crocodile and the American crocodile: implications for population history and in situ/ex situ conservation.

Milián-García Y, Ramos-Targarona R, Pérez-Fleitas E, Sosa-Rodríguez G, Guerra-Manchena L, Alonso-Tabet M, Espinosa-López G, Russello MA.

Heredity (Edinb). 2015 Mar;114(3):272-80. doi: 10.1038/hdy.2014.96. Epub 2014 Oct 22.


Lineage fusion in Galápagos giant tortoises.

Garrick RC, Benavides E, Russello MA, Hyseni C, Edwards DL, Gibbs JP, Tapia W, Ciofi C, Caccone A.

Mol Ecol. 2014 Nov;23(21):5276-90. doi: 10.1111/mec.12919. Epub 2014 Oct 4.


Adaptive divergence along environmental gradients in a climate-change-sensitive mammal.

Henry P, Russello MA.

Ecol Evol. 2013 Oct;3(11):3906-17. doi: 10.1002/ece3.776. Epub 2013 Sep 16.


Lack of parallel genetic patterns underlying the repeated ecological divergence of beach and stream-spawning kokanee salmon.

Frazer KK, Russello MA.

J Evol Biol. 2013 Dec;26(12):2606-21. doi: 10.1111/jeb.12250. Epub 2013 Oct 1.


Novel genomic resources for a climate change sensitive mammal: characterization of the American pika transcriptome.

Lemay MA, Henry P, Lamb CT, Robson KM, Russello MA.

BMC Genomics. 2013 May 10;14:311. doi: 10.1186/1471-2164-14-311.


Transcriptome-wide comparison of sequence variation in divergent ecotypes of kokanee salmon.

Lemay MA, Donnelly DJ, Russello MA.

BMC Genomics. 2013 May 7;14:308. doi: 10.1186/1471-2164-14-308.


Genetic evidence for restricted dispersal along continuous altitudinal gradients in a climate change-sensitive mammal: the American Pika.

Henry P, Sim Z, Russello MA.

PLoS One. 2012;7(6):e39077. doi: 10.1371/journal.pone.0039077. Epub 2012 Jun 15.


Genetic rediscovery of an 'extinct' Galápagos giant tortoise species.

Garrick RC, Benavides E, Russello MA, Gibbs JP, Poulakakis N, Dion KB, Hyseni C, Kajdacsi B, Márquez L, Bahan S, Ciofi C, Tapia W, Caccone A.

Curr Biol. 2012 Jan 10;22(1):R10-1. doi: 10.1016/j.cub.2011.12.004. No abstract available.


Detection of outlier loci and their utility for fisheries management.

Russello MA, Kirk SL, Frazer KK, Askey PJ.

Evol Appl. 2012 Jan;5(1):39-52. doi: 10.1111/j.1752-4571.2011.00206.x. Epub 2011 Sep 17.


Reconstructing genetic mating systems in the absence of parental information in colonially breeding waterbirds.

Miño CI, Russello MA, Mussi Gonçalves PF, Del Lama SN.

BMC Evol Biol. 2011 Jul 8;11:196. doi: 10.1186/1471-2148-11-196.


A noninvasive hair sampling technique to obtain high quality DNA from elusive small mammals.

Henry P, Henry A, Russello MA.

J Vis Exp. 2011 Mar 13;(49). pii: 2791. doi: 10.3791/2791.


Genetic evidence for high propagule pressure and long-distance dispersal in monk parakeet (Myiopsitta monachus) invasive populations.

Gonçalves da Silva A, Eberhard JR, Wright TF, Avery ML, Russello MA.

Mol Ecol. 2010 Aug;19(16):3336-50. doi: 10.1111/j.1365-294X.2010.04749.x. Epub 2010 Jul 26.


Genetic approaches refine ex situ lowland tapir (Tapirus terrestris) conservation.

Gonçalves da Silva A, Lalonde DR, Quse V, Shoemaker A, Russello MA.

J Hered. 2010 Sep-Oct;101(5):581-90. doi: 10.1093/jhered/esq055. Epub 2010 May 19.


DNA from the past informs ex situ conservation for the future: an "extinct" species of Galápagos tortoise identified in captivity.

Russello MA, Poulakakis N, Gibbs JP, Tapia W, Benavides E, Powell JR, Caccone A.

PLoS One. 2010 Jan 13;5(1):e8683. doi: 10.1371/journal.pone.0008683.


Progressive colonization and restricted gene flow shape island-dependent population structure in Galápagos marine iguanas (Amblyrhynchus cristatus).

Steinfartz S, Glaberman S, Lanterbecq D, Russello MA, Rosa S, Hanley TC, Marquez C, Snell HL, Snell HM, Gentile G, Dell'Olmo G, Powell AM, Caccone A.

BMC Evol Biol. 2009 Dec 22;9:297. doi: 10.1186/1471-2148-9-297.


In situ population structure and ex situ representation of the endangered Amur tiger.

Henry P, Miquelle D, Sugimoto T, McCullough DR, Caccone A, Russello MA.

Mol Ecol. 2009 Aug;18(15):3173-84. doi: 10.1111/j.1365-294X.2009.04266.x. Epub 2009 Jun 23.


Genetic evidence links invasive monk parakeet populations in the United States to the international pet trade.

Russello MA, Avery ML, Wright TF.

BMC Evol Biol. 2008 Jul 24;8:217. doi: 10.1186/1471-2148-8-217.


Historical analysis of a near disaster: Anopheles gambiae in Brazil.

Parmakelis A, Russello MA, Caccone A, Marcondes CB, Costa J, Forattini OP, Sallum MA, Wilkerson RC, Powell JR.

Am J Trop Med Hyg. 2008 Jan;78(1):176-8.


On the horns of a dilemma: molecular approaches refine ex situ conservation in crisis.

Russello MA, Amato G.

Mol Ecol. 2007 Jun;16(12):2405-6.


Lonesome George is not alone among Galápagos tortoises.

Russello MA, Beheregaray LB, Gibbs JP, Fritts T, Havill N, Powell JR, Caccone A.

Curr Biol. 2007 May 1;17(9):R317-8. No abstract available.


A cryptic taxon of Galápagos tortoise in conservation peril.

Russello MA, Glaberman S, Gibbs JP, Marquez C, Powell JR, Caccone A.

Biol Lett. 2005 Sep 22;1(3):287-90.


Ex situ population management in the absence of pedigree information.

Russello MA, Amato G.

Mol Ecol. 2004 Sep;13(9):2829-40.


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