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Items: 1 to 50 of 1022

1.

CoMPARA: Collaborative Modeling Project for Androgen Receptor Activity.

Mansouri K, Kleinstreuer N, Abdelaziz AM, Alberga D, Alves VM, Andersson PL, Andrade CH, Bai F, Balabin I, Ballabio D, Benfenati E, Bhhatarai B, Boyer S, Chen J, Consonni V, Farag S, Fourches D, García-Sosa AT, Gramatica P, Grisoni F, Grulke CM, Hong H, Horvath D, Hu X, Huang R, Jeliazkova N, Li J, Li X, Liu H, Manganelli S, Mangiatordi GF, Maran U, Marcou G, Martin T, Muratov E, Nguyen DT, Nicolotti O, Nikolov NG, Norinder U, Papa E, Petitjean M, Piir G, Pogodin P, Poroikov V, Qiao X, Richard AM, Roncaglioni A, Ruiz P, Rupakheti C, Sakkiah S, Sangion A, Schramm KW, Selvaraj C, Shah I, Sild S, Sun L, Taboureau O, Tang Y, Tetko IV, Todeschini R, Tong W, Trisciuzzi D, Tropsha A, Van Den Driessche G, Varnek A, Wang Z, Wedebye EB, Williams AJ, Xie H, Zakharov AV, Zheng Z, Judson RS.

Environ Health Perspect. 2020 Feb;128(2):27002. doi: 10.1289/EHP5580. Epub 2020 Feb 7.

2.

Effect of temperature on the formation of acrylamide in cocoa beans during drying treatment: An experimental and computational study.

Gil M, Ruiz P, Quijano J, Londono-Londono J, Jaramillo Y, Gallego V, Tessier F, Notario R.

Heliyon. 2020 Feb 10;6(2):e03312. doi: 10.1016/j.heliyon.2020.e03312. eCollection 2020 Feb.

3.

TLR7 Agonism Accelerates Disease and Causes a Fatal Myeloproliferative Disorder in NZM 2410 Lupus Mice.

Wirth JR, Molano I, Ruiz P, Coutermarsh-Ott S, Cunningham MA.

Front Immunol. 2020 Jan 10;10:3054. doi: 10.3389/fimmu.2019.03054. eCollection 2019.

4.

Activation of pH-Sensing Receptor OGR1 (GPR68) Induces ER Stress Via the IRE1α/JNK Pathway in an Intestinal Epithelial Cell Model.

Maeyashiki C, Melhem H, Hering L, Baebler K, Cosin-Roger J, Schefer F, Weder B, Hausmann M, Scharl M, Rogler G, de Vallière C, Ruiz PA.

Sci Rep. 2020 Jan 29;10(1):1438. doi: 10.1038/s41598-020-57657-9.

5.

Development of novel small molecules for the treatment of ALS.

Mathew B, Ruiz P, Pathak V, Suto MJ.

Bioorg Med Chem Lett. 2020 Feb 15;30(4):126950. doi: 10.1016/j.bmcl.2020.126950. Epub 2020 Jan 7.

PMID:
31928838
6.

Nuclear factor of activated T cells as potential pharmacodynamic biomarker for the risk of acute and subclinical rejection in de novo liver recipients.

Millán O, Ruiz P, Fortuna V, Navasa M, Brunet M.

Liver Int. 2019 Dec 28. doi: 10.1111/liv.14339. [Epub ahead of print]

PMID:
31883422
7.

Exploring Mechanistic Toxicity of Mixtures Using PBPK Modeling and Computational Systems Biology.

Ruiz P, Emond C, McLanahan ED, Joshi-Barr S, Mumtaz M.

Toxicol Sci. 2020 Mar 1;174(1):38-50. doi: 10.1093/toxsci/kfz243.

PMID:
31851354
8.

Long term recurrence free survival in a stage IV gallbladder cancer treated with chemotherapy plus trastuzumab and salvage liver resection.

Prieto M, Gastaca M, Ruiz P, Ventoso A, Palomares I, Perfecto A, Valdivieso A.

Ann Hepatobiliary Pancreat Surg. 2019 Nov;23(4):403-407. doi: 10.14701/ahbps.2019.23.4.403. Epub 2019 Nov 29.

9.

Clostridium difficile infection mimics intestinal acute cellular rejection in pediatric multivisceral transplant-A case series.

Cheung DA, Beduschi T, Tekin A, Selvaggi G, Ruiz P, Vianna RM, Garcia J.

Pediatr Transplant. 2020 Feb;24(1):e13621. doi: 10.1111/petr.13621. Epub 2019 Dec 9.

PMID:
31815352
10.

A plasma calcium-phosphorus product can be used to predict the lifespan of dogs with chronic kidney disease.

Lucero MC, Duque FJ, Gil M, Ruiz P, Macías-García B, Cristóbal JI, Zaragoza C, Barrera R.

Can Vet J. 2019 Dec;60(12):1319-1325.

PMID:
31814639
11.

GSTM1 Deletion Exaggerates Kidney Injury in Experimental Mouse Models and Confers the Protective Effect of Cruciferous Vegetables in Mice and Humans.

Gigliotti JC, Tin A, Pourafshar S, Cechova S, Wang YT, Sung SJ, Bodonyi-Kovacs G, Cross JV, Yang G, Nguyen N, Chan F, Rebholz C, Yu B, Grove ML, Grams ME, Köttgen A, Scharpf R, Ruiz P, Boerwinkle E, Coresh J, Le TH.

J Am Soc Nephrol. 2020 Jan;31(1):102-116. doi: 10.1681/ASN.2019050449. Epub 2019 Nov 14.

PMID:
31727850
12.

MacroH2A1 Regulation of Poly(ADP-Ribose) Synthesis and Stability Prevents Necrosis and Promotes DNA Repair.

Ruiz PD, Hamilton GA, Park JW, Gamble MJ.

Mol Cell Biol. 2019 Dec 11;40(1). pii: e00230-19. doi: 10.1128/MCB.00230-19. Print 2019 Dec 11.

13.

Higher frequency of hospitalization but lower relative mortality for pandemic influenza in people with type 2 diabetes.

Ruiz PLD, Bakken IJ, Håberg SE, Tapia G, Hauge SH, Birkeland KI, Gulseth HL, Stene LC.

J Intern Med. 2020 Jan;287(1):78-86. doi: 10.1111/joim.12984. Epub 2019 Oct 28.

PMID:
31587396
14.

Identification of glomerular and podocyte-specific genes and pathways activated by sera of patients with focal segmental glomerulosclerosis.

Otalora L, Chavez E, Watford D, Tueros L, Correa M, Nair V, Ruiz P, Wahl P, Eddy S, Martini S, Kretzler M, Burke GW 3rd, Fornoni A, Merscher S.

PLoS One. 2019 Oct 3;14(10):e0222948. doi: 10.1371/journal.pone.0222948. eCollection 2019.

15.

Controlled donation after circulatory death up to 80 years for liver transplantation: Pushing the limit again.

Gastaca M, Ruiz P, Bustamante J, Valdivieso A.

Am J Transplant. 2020 Feb;20(2):614. doi: 10.1111/ajt.15600. Epub 2019 Oct 18. No abstract available.

PMID:
31531946
16.

Computed Tomography-Guided Kidney Transplant Biopsy Outcomes: A Single-Center Experience.

Cortesi C, Sedki M, Ruiz P, Salsamendi J, Mattiazzi A.

Exp Clin Transplant. 2019 Sep 16. doi: 10.6002/ect.2019.0111. [Epub ahead of print]

17.
18.

The Fish Pathogen Vibrio ordalii Under Iron Deprivation Produces the Siderophore Piscibactin.

Ruiz P, Balado M, Fuentes-Monteverde JC, Toranzo AE, Rodríguez J, Jiménez C, Avendaño-Herrera R, Lemos ML.

Microorganisms. 2019 Sep 3;7(9). pii: E313. doi: 10.3390/microorganisms7090313.

19.

The Authors' Reply: To NRP or Not to NRP, That Is the Question….

Ruiz P, Gastaca M, Bustamante FJ, Valdivieso A.

Transplantation. 2019 Dec;103(12):e400. doi: 10.1097/TP.0000000000002878. No abstract available.

PMID:
31385926
20.

Differential homotypic and heterotypic interactions of antigen 43 (Ag43) variants in autotransporter-mediated bacterial autoaggregation.

Ageorges V, Schiavone M, Jubelin G, Caccia N, Ruiz P, Chafsey I, Bailly X, Dague E, Leroy S, Paxman J, Heras B, Chaucheyras-Durand F, Rossiter AE, Henderson IR, Desvaux M.

Sci Rep. 2019 Jul 31;9(1):11100. doi: 10.1038/s41598-019-47608-4.

21.

Incidence, Predictors, and Impact on Survival of Long-term Cardiovascular Events After Liver Transplantation.

Sastre L, García R, Gándara JG, Ruiz P, Lombardo J, Colmenero J, Navasa M, Crespo G.

Transplantation. 2020 Feb;104(2):317-325. doi: 10.1097/TP.0000000000002852.

PMID:
31335770
22.

Surgical Outcome and Treatment of Thyrotropin-Secreting Pituitary Tumors in a Tertiary Referral Center.

Herguido NG, Fuentes ED, Venegas-Moreno E, Maorad LB, Flores-Martinez A, Ruiz PR, Dueñas MC, Roldán F, Fajardo E, Ruiz-Valdepeñas EC, Kaen A, Martín Schrader I, Cano DA, Soto-Moreno A.

World Neurosurg. 2019 Oct;130:e634-e639. doi: 10.1016/j.wneu.2019.06.180. Epub 2019 Jul 2.

PMID:
31276853
23.

Combined lung and liver procurement in controlled donation after circulatory death using normothermic abdominal perfusion. Initial experience in two Spanish centers.

Miñambres E, Ruiz P, Ballesteros MA, Álvarez C, Cifrián JM, Atutxa L, Ventoso A, Castillo F, Gastaca M.

Am J Transplant. 2020 Jan;20(1):231-240. doi: 10.1111/ajt.15520. Epub 2019 Jul 29.

PMID:
31265753
24.

DNAvisualization.org: a serverless web tool for DNA sequence visualization.

Lee BD, Timony MA, Ruiz P.

Nucleic Acids Res. 2019 Jul 2;47(W1):W20-W25. doi: 10.1093/nar/gkz404.

25.

Reply to: "Normothermic regional perfusion - What is the benefit?"

Hessheimer AJ, Coll E, Ruíz P, Gastaca M, Rivas JI, Gómez M, Sánchez B, Santoyo J, Ramírez P, Parrilla P, Marín LM, Gómez-Bravo MÁ, García-Valdecasas JC, López-Monclús J, Boscá A, López-Andújar R, Fundora-Suárez Y, Villar J, García-Sesma Á, Jiménez C, Rodríguez-Laíz G, Lladó L, Rodríguez JC, Barrera M, Charco R, López-Baena JÁ, Briceño J, Pardo F, Blanco G, Pacheco D, Domínguez-Gil B, Sánchez Turrión V, Fondevila C.

J Hepatol. 2019 Aug;71(2):443-445. doi: 10.1016/j.jhep.2019.04.005. Epub 2019 May 23. No abstract available.

PMID:
31130439
26.

Contamination rate of the surgical gowns during total hip arthroplasty.

Klaber I, Ruiz P, Schweitzer D, Lira MJ, Botello E, Wozniak A.

Arch Orthop Trauma Surg. 2019 Jul;139(7):1015-1019. doi: 10.1007/s00402-019-03211-w. Epub 2019 May 24.

PMID:
31127407
27.

The Virgin Islands National Information Systems for Health: vision, actions, and lessons learned for advancing the national public health agenda.

Potter I, Petersen T, D'Agostino M, Doane D, Ruiz P, Marti M, Fitzgerald J, Del Riego A, de Cosio FG, Espinal M.

Rev Panam Salud Publica. 2018 Sep 24;42:e156. doi: 10.26633/RPSP.2018.156. eCollection 2018.

28.

Exploring current read-across applications and needs among selected U.S. Federal Agencies.

Patlewicz G, Lizarraga LE, Rua D, Allen DG, Daniel AB, Fitzpatrick SC, Garcia-Reyero N, Gordon J, Hakkinen P, Howard AS, Karmaus A, Matheson J, Mumtaz M, Richarz AN, Ruiz P, Scarano L, Yamada T, Kleinstreuer N.

Regul Toxicol Pharmacol. 2019 Aug;106:197-209. doi: 10.1016/j.yrtph.2019.05.011. Epub 2019 May 10.

PMID:
31078681
29.

Monitoring of miR-181a-5p and miR-155-5p Plasmatic Expression as Prognostic Biomarkers for Acute and Subclinical Rejection in de novo Adult Liver Transplant Recipients.

Millán O, Ruiz P, Orts L, Ferré P, Crespo G, Santana M, Fortuna V, Quintairos L, Navasa M, Brunet M.

Front Immunol. 2019 Apr 24;10:873. doi: 10.3389/fimmu.2019.00873. eCollection 2019.

30.

Computational multifocal microscopy.

He K, Wang Z, Huang X, Wang X, Yoo S, Ruiz P, Gdor I, Selewa A, Ferrier NJ, Scherer N, Hereld M, Katsaggelos AK, Cossairt O.

Biomed Opt Express. 2018 Nov 28;9(12):6477-6496. doi: 10.1364/BOE.9.006477. eCollection 2018 Dec 1.

31.

Distal femoral hemiepiphysiodesis with screws and suture versus 8-plate for the treatment of genu valgum in children.

Martínez G, Gündel A, Ruiz P, Cañete I, Hodgson F.

Orthop Traumatol Surg Res. 2019 Jun;105(4):751-755. doi: 10.1016/j.otsr.2019.02.019. Epub 2019 Apr 15.

PMID:
31000342
32.

Procyanidin-Cell Wall Interactions within Apple Matrices Decrease the Metabolization of Procyanidins by the Human Gut Microbiota and the Anti-Inflammatory Effect of the Resulting Microbial Metabolome In Vitro.

Le Bourvellec C, Bagano Vilas Boas P, Lepercq P, Comtet-Marre S, Auffret P, Ruiz P, Bott R, Renard CMGC, Dufour C, Chatel JM, Mosoni P.

Nutrients. 2019 Mar 19;11(3). pii: E664. doi: 10.3390/nu11030664.

33.

The macroH2A1.2 histone variant links ATRX loss to alternative telomere lengthening.

Kim J, Sun C, Tran AD, Chin PJ, Ruiz PD, Wang K, Gibbons RJ, Gamble MJ, Liu Y, Oberdoerffer P.

Nat Struct Mol Biol. 2019 Mar;26(3):213-219. doi: 10.1038/s41594-019-0192-3. Epub 2019 Mar 4.

34.

The UK DCD Risk Score: Still no consensus on futility in DCD liver transplantation.

Hessheimer AJ, Coll E, Ruíz P, Gastaca M, Rivas JI, Gómez M, Sánchez B, Santoyo J, Ramírez P, Parrilla P, Marín LM, Gómez-Bravo MÁ, García-Valdecasas JC, López-Monclús J, Boscá A, López-Andújar R, Fundora-Suárez J, Villar J, García-Sesma Á, Jiménez C, Rodríguez-Laíz G, Lladó L, Rodríguez JC, Barrera M, Charco R, López-Baena JÁ, Briceño J, Pardo F, Blanco G, Pacheco D, Domínguez-Gil B, Sánchez Turrión V, Fondevila C.

J Hepatol. 2019 May;70(5):1034-1035. doi: 10.1016/j.jhep.2019.01.004. Epub 2019 Feb 16. No abstract available.

PMID:
30782424
35.

Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop.

Osoegawa K, Vayntrub TA, Wenda S, De Santis D, Barsakis K, Ivanova M, Hsu S, Barone J, Holdsworth R, Diviney M, Askar M, Willis A, Railton D, Laflin S, Gendzekhadze K, Oki A, Sacchi N, Mazzocco M, Andreani M, Ameen R, Stavropoulos-Giokas C, Dinou A, Torres M, Dos Santos Francisco R, Serra-Pages C, Goodridge D, Balladares S, Bettinotti MP, Iglehart B, Kashi Z, Martin R, Saw CL, Ragoussis J, Downing J, Navarrete C, Chong W, Saito K, Petrek M, Tokic S, Padros K, Beatriz Rodriguez M, Zakharova V, Shragina O, Marino SR, Brown NK, Shiina T, Suzuki S, Spierings E, Zhang Q, Yin Y, Morris GP, Hernandez A, Ruiz P, Khor SS, Tokunaga K, Geretz A, Thomas R, Yamamoto F, Mallempati KC, Gangavarapu S, Kanga U, Tyagi S, Marsh SGE, Bultitude WP, Liu X, Cao D, Penning M, Hurley CK, Cesbron A, Mueller C, Mytilineos J, Weimer ET, Bengtsson M, Fischer G, Hansen JA, Chang CJ, Mack SJ, Creary LE, Fernandez-Viña MA.

Hum Immunol. 2019 Apr;80(4):228-236. doi: 10.1016/j.humimm.2019.01.009. Epub 2019 Feb 6. Review.

36.

Iron Prevents Hypoxia-Associated Inflammation Through the Regulation of Nuclear Factor-κB in the Intestinal Epithelium.

Simmen S, Cosin-Roger J, Melhem H, Maliachovas N, Maane M, Baebler K, Weder B, Maeyashiki C, Spanaus K, Scharl M, de Vallière C, Zeitz J, Vavricka SR, Hausmann M, Rogler G, Ruiz PA.

Cell Mol Gastroenterol Hepatol. 2019;7(2):339-355. doi: 10.1016/j.jcmgh.2018.10.006. Epub 2018 Oct 17.

37.

Steroid-Free Immune Suppression Impairs Glycemic Control in a Healthy Cynomolgus Monkey.

Berman DM, Ruiz P Jr, Blandino-Rosano M, Bernal-Mizrachi E, Kenyon NS.

Cell Transplant. 2019 Mar;28(3):262-268. doi: 10.1177/0963689718823505. Epub 2019 Jan 24.

38.

In Vitro Activity of Tedizolid against Mycobacterium tuberculosis.

Ruiz P, Causse M, Vaquero M, Casal M.

Antimicrob Agents Chemother. 2019 Mar 27;63(4). pii: e01939-18. doi: 10.1128/AAC.01939-18. Print 2019 Apr.

39.

Hepaticojejunostomy in Orthotopic Liver Transplant: A Retrospective Case Control Study.

Prieto M, Valdivieso A, Gastaca M, Pijoan JI, Ruiz P, Ventoso A, Palomares I, Ortiz de Urbina J.

Transplant Proc. 2019 Jan - Feb;51(1):58-61. doi: 10.1016/j.transproceed.2018.03.135. Epub 2018 Jun 30.

PMID:
30661893
40.

The impact of the rs8005161 polymorphism on G protein-coupled receptor GPR65 (TDAG8) pH-associated activation in intestinal inflammation.

Tcymbarevich IV, Eloranta JJ, Rossel JB, Obialo N, Spalinger M, Cosin-Roger J, Lang S, Kullak-Ublick GA, Wagner CA, Scharl M, Seuwen K, Ruiz PA, Rogler G, de Vallière C, Misselwitz B; Swiss IBD Cohort Study Group.

BMC Gastroenterol. 2019 Jan 7;19(1):2. doi: 10.1186/s12876-018-0922-8.

41.

Development, validation and integration of in silico models to identify androgen active chemicals.

Manganelli S, Roncaglioni A, Mansouri K, Judson RS, Benfenati E, Manganaro A, Ruiz P.

Chemosphere. 2019 Apr;220:204-215. doi: 10.1016/j.chemosphere.2018.12.131. Epub 2018 Dec 19.

PMID:
30584954
42.

Normothermic regional perfusion vs. super-rapid recovery in controlled donation after circulatory death liver transplantation.

Hessheimer AJ, Coll E, Torres F, Ruíz P, Gastaca M, Rivas JI, Gómez M, Sánchez B, Santoyo J, Ramírez P, Parrilla P, Marín LM, Gómez-Bravo MÁ, García-Valdecasas JC, López-Monclús J, Boscá A, López-Andújar R, Fundora-Suárez J, Villar J, García-Sesma Á, Jiménez C, Rodríguez-Laíz G, Lladó L, Rodríguez JC, Barrera M, Charco R, López-Baena JÁ, Briceño J, Pardo F, Blanco G, Pacheco D, Domínguez-Gil B, Sánchez Turrión V, Fondevila C.

J Hepatol. 2019 Apr;70(4):658-665. doi: 10.1016/j.jhep.2018.12.013. Epub 2018 Dec 22.

PMID:
30582980
43.

Human CYP2A6, CYP2B6, AND CYP2E1 Atropselectively Metabolize Polychlorinated Biphenyls to Hydroxylated Metabolites.

Uwimana E, Ruiz P, Li X, Lehmler HJ.

Environ Sci Technol. 2019 Feb 19;53(4):2114-2123. doi: 10.1021/acs.est.8b05250. Epub 2019 Feb 8.

44.

Lack of the pH-sensing Receptor TDAG8 [GPR65] in Macrophages Plays a Detrimental Role in Murine Models of Inflammatory Bowel Disease.

Tcymbarevich I, Richards SM, Russo G, Kühn-Georgijevic J, Cosin-Roger J, Baebler K, Lang S, Bengs S, Atrott K, Bettoni C, Gruber S, Frey-Wagner I, Scharl M, Misselwitz B, Wagner CA, Seuwen K, Rogler G, Ruiz PA, Spalinger M, de Vallière C.

J Crohns Colitis. 2019 Feb 1;13(2):245-258. doi: 10.1093/ecco-jcc/jjy152.

PMID:
30535144
45.

MacroH2A1 chromatin specification requires its docking domain and acetylation of H2B lysine 20.

Ruiz PD, Gamble MJ.

Nat Commun. 2018 Dec 3;9(1):5143. doi: 10.1038/s41467-018-07189-8.

46.

Severe hepatitis B reactivation during direct-acting antiviral treatment in "the absence" of hepatitis B surface antigen.

Sastre L, Ruiz P, Costa J, Forns X.

Int J Infect Dis. 2019 Feb;79:47-49. doi: 10.1016/j.ijid.2018.11.014. Epub 2018 Nov 26.

47.

MYH9 Associated nephropathy.

Furlano M, Arlandis R, Venegas MDP, Novelli S, Crespi J, Bullich G, Ayasreh N, Remacha Á, Ruiz P, Lorente L, Ballarín J, Matamala A, Ars E, Torra R.

Nefrologia. 2019 Mar - Apr;39(2):133-140. doi: 10.1016/j.nefro.2018.08.008. Epub 2018 Nov 22. Review. English, Spanish.

48.

Design and simulation of a snapshot multi-focal interferometric microscope.

He K, Huang X, Wang X, Yoo S, Ruiz P, Gdor I, Ferrier NJ, Scherer N, Hereld M, Katsaggelos AK, Cossairt O.

Opt Express. 2018 Oct 15;26(21):27381-27402. doi: 10.1364/OE.26.027381.

PMID:
30469808
49.

Impact of an acute hemodynamic response-guided protocol for primary prophylaxis of variceal bleeding.

Fortea JI, Puente Á, Ruiz P, Ezcurra I, Vaquero J, Cuadrado A, Arias-Loste MT, Cabezas J, Llerena S, Iruzubieta P, Rodríguez-Lope C, Huelin P, Casafont F, Fábrega E, Crespo J.

World J Clin Cases. 2018 Nov 6;6(13):611-623. doi: 10.12998/wjcc.v6.i13.611.

50.

Novel mechanism for estrogen receptor alpha modulation of murine lupus.

Cunningham MA, Richard ML, Wirth JR, Scott JL, Eudaly J, Ruiz P, Gilkeson GS.

J Autoimmun. 2019 Feb;97:59-69. doi: 10.1016/j.jaut.2018.10.011. Epub 2018 Nov 8.

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