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It takes two to tango: two Aeromonas isolates combine virulence and multidrug resistance in flap infection following leech therapy.

Barraud O, Robert A, Laval L, Ruimy R, Morquin D, Boyer L, Lamy B.

Clin Microbiol Infect. 2020 Jan 9. pii: S1198-743X(19)30680-9. doi: 10.1016/j.cmi.2019.12.021. [Epub ahead of print]


Antibiotic prophylaxis after open fractures needs to be (re)assessed.

Manuello R, Ruimy R, Boileau P, Trojani C, Courjon J.

Clin Microbiol Infect. 2019 Oct 9. pii: S1198-743X(19)30526-9. doi: 10.1016/j.cmi.2019.09.025. [Epub ahead of print] No abstract available.


Co-culture of Methanobrevibacter smithii with enterobacteria during urinary infection.

Grine G, Lotte R, Chirio D, Chevalier A, Raoult D, Drancourt M, Ruimy R.

EBioMedicine. 2019 May;43:333-337. doi: 10.1016/j.ebiom.2019.04.037. Epub 2019 May 7.


Adherence to antibiotic guidelines for erysipelas or cellulitis is associated with a favorable outcome.

Klotz C, Courjon J, Michelangeli C, Demonchy E, Ruimy R, Roger PM.

Eur J Clin Microbiol Infect Dis. 2019 Apr;38(4):703-709. doi: 10.1007/s10096-019-03490-6. Epub 2019 Jan 26.


Enterobacteria vaginal colonization among patients with preterm premature rupture of membranes from 24 to 34 weeks of gestation and neonatal infection risk.

Merello M, Lotte L, Gonfrier S, Eleni Dit Trolli S, Casagrande F, Ruimy R, Bongain A.

J Gynecol Obstet Hum Reprod. 2019 Mar;48(3):187-191. doi: 10.1016/j.jogoh.2018.12.007. Epub 2018 Dec 16.


Oceanobacillus timonensis sp. nov. and Oceanobacillus senegalensis sp. nov., two new moderately halophilic, Gram-stain positive bacteria isolated from stools sample of healthy young Senegalese.

Senghor B, Bassène H, Khelaifia S, Robert C, Fournier PE, Ruimy R, Sokhna C, Raoult D, Lagier JC.

Antonie Van Leeuwenhoek. 2019 May;112(5):785-796. doi: 10.1007/s10482-018-01212-0. Epub 2018 Dec 15.


Direct Identification of 80 Percent of Bacteria from Blood Culture Bottles by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Using a 10-Minute Extraction Protocol.

Simon L, Ughetto E, Gaudart A, Degand N, Lotte R, Ruimy R.

J Clin Microbiol. 2019 Jan 30;57(2). pii: e01278-18. doi: 10.1128/JCM.01278-18. Print 2019 Feb.


Tobacco-smoking-related prevalence of methanogens in the oral fluid microbiota.

Grine G, Terrer E, Boualam MA, Aboudharam G, Chaudet H, Ruimy R, Drancourt M.

Sci Rep. 2018 Jun 15;8(1):9197. doi: 10.1038/s41598-018-27372-7.


Bacillus cereus, a serious cause of nosocomial infections: Epidemiologic and genetic survey.

Glasset B, Herbin S, Granier SA, Cavalié L, Lafeuille E, Guérin C, Ruimy R, Casagrande-Magne F, Levast M, Chautemps N, Decousser JW, Belotti L, Pelloux I, Robert J, Brisabois A, Ramarao N.

PLoS One. 2018 May 23;13(5):e0194346. doi: 10.1371/journal.pone.0194346. eCollection 2018.


Rapid phenotypic methods to improve the diagnosis of bacterial bloodstream infections: meeting the challenge to reduce the time to result.

Dubourg G, Lamy B, Ruimy R.

Clin Microbiol Infect. 2018 Sep;24(9):935-943. doi: 10.1016/j.cmi.2018.03.031. Epub 2018 Mar 29. Review.


Improved quality of care for patients infected or colonised with ESBL-producing Enterobacteriaceae in a French teaching hospital: impact of an interventional prospective study and development of specific tools.

Mondain V, Lieutier F, Pulcini C, Degand N, Landraud L, Ruimy R, Fosse T, Roger PM.

Eur J Clin Microbiol Infect Dis. 2018 May;37(5):977-981. doi: 10.1007/s10096-018-3234-6. Epub 2018 Mar 28.


Sediminibacillus massiliensis sp. nov., a moderately halophilic, Gram-positive bacterium isolated from a stool sample of a young Senegalese man.

Senghor B, Bassène H, Khelaifia S, Robert C, Fournier PE, Ruimy R, Sokhna C, Raoult D, Lagier JC.

Antonie Van Leeuwenhoek. 2018 Jul;111(7):1225-1236. doi: 10.1007/s10482-018-1032-x. Epub 2018 Feb 7.


Decreased susceptibility to chlorhexidine affects a quarter of Escherichia coli isolates responsible for pneumonia in ICU patients.

La Combe B, Bleibtreu A, Messika J, Fernandes R, Clermont O, Branger C, Billard-Pomares T, Barnaud G, Magdoud F, Eveillard M, Kouatchet A, Lasocki S, Asfar P, Corvec S, Lakhal K, Armand-Lefevre L, Wolff M, Timsit JF, Bourdon S, Reignier J, Martin S, Fihman V, de Prost N, Bador J, Charles PE, Goret J, Boyer A, Wallet F, Jaillette E, Nseir S, Landraud L, Ruimy R, Danin PE, Dellamonica J, Cremniter J, Frat JP, Jauréguy F, Clec'h C, Decré D, Maury E, Dreyfuss D, Denamur E, Ricard JD.

Intensive Care Med. 2018 Apr;44(4):531-533. doi: 10.1007/s00134-018-5061-8. Epub 2018 Jan 29. No abstract available.


Methanobrevibacter oralis detected along with Aggregatibacter actinomycetemcomitans in a series of community-acquired brain abscesses.

Nkamga VD, Lotte R, Chirio D, Lonjon M, Roger PM, Drancourt M, Ruimy R.

Clin Microbiol Infect. 2018 Feb;24(2):207-208. doi: 10.1016/j.cmi.2017.08.021. Epub 2017 Sep 4. No abstract available.


Using MALDI-TOF MS typing method to decipher outbreak: the case of Staphylococcus saprophyticus causing urinary tract infections (UTIs) in Marseille, France.

Mlaga KD, Dubourg G, Abat C, Chaudet H, Lotte L, Diene SM, Raoult D, Ruimy R, Rolain JM.

Eur J Clin Microbiol Infect Dis. 2017 Dec;36(12):2371-2377. doi: 10.1007/s10096-017-3069-6. Epub 2017 Aug 22.


Patients with community-acquired bacteremia of unknown origin: clinical characteristics and usefulness of microbiological results for therapeutic issues: a single-center cohort study.

Courjon J, Demonchy E, Degand N, Risso K, Ruimy R, Roger PM.

Ann Clin Microbiol Antimicrob. 2017 May 19;16(1):40. doi: 10.1186/s12941-017-0214-0.


An update on bacterial brain abscess in immunocompetent patients.

Sonneville R, Ruimy R, Benzonana N, Riffaud L, Carsin A, Tadié JM, Piau C, Revest M, Tattevin P; ESCMID Study Group for Infectious Diseases of the Brain (ESGIB).

Clin Microbiol Infect. 2017 Sep;23(9):614-620. doi: 10.1016/j.cmi.2017.05.004. Epub 2017 May 10. Review.


Seawater drowning-associated pneumonia: a 10-year descriptive cohort in intensive care unit.

Robert A, Danin PÉ, Quintard H, Degand N, Martis N, Doyen D, Pulcini C, Ruimy R, Ichai C, Bernardin G, Dellamonica J.

Ann Intensive Care. 2017 Dec;7(1):45. doi: 10.1186/s13613-017-0267-4. Epub 2017 Apr 26.


Virulence Analysis of Bacillus cereus Isolated after Death of Preterm Neonates, Nice, France, 2013.

Lotte R, Hérissé AL, Berrouane Y, Lotte L, Casagrande F, Landraud L, Herbin S, Ramarao N, Boyer L, Ruimy R.

Emerg Infect Dis. 2017 May;23(5):845-848. doi: 10.3201/eid2305.161788.


'Nissabacter archeti' gen. nov., sp. nov., a new member of Enterobacteriaceae family, isolated from human sample at Archet 2 Hospital, Nice, France.

Mlaga KD, Lotte R, Montaudié H, Rolain JM, Ruimy R.

New Microbes New Infect. 2017 Mar 1;17:81-83. doi: 10.1016/j.nmni.2017.02.001. eCollection 2017 May.


Identification of cancer-associated missense mutations in hace1 that impair cell growth control and Rac1 ubiquitylation.

Andrio E, Lotte R, Hamaoui D, Cherfils J, Doye A, Daugaard M, Sorensen PH, Bost F, Ruimy R, Mettouchi A, Lemichez E.

Sci Rep. 2017 Mar 20;7:44779. doi: 10.1038/srep44779.


First isolation of Clostridium indolis in a patient with chronic osteitis: a case report and literature review of human infections related to Clostridium saccharolyticum group species.

Lotte R, Lotte L, Bouvet P, Degand N, Bal A, Carles M, de Dompsure RB, Popoff MR, Ruimy R.

Anaerobe. 2016 Dec;42:44-49. doi: 10.1016/j.anaerobe.2016.08.001. Epub 2016 Aug 7.


Methanobrevibacter smithii and Bacteroides thetaiotaomicron cultivated from a chronic paravertebral muscle abscess.

Nkamga VD, Lotte R, Roger PM, Drancourt M, Ruimy R.

Clin Microbiol Infect. 2016 Dec;22(12):1008-1009. doi: 10.1016/j.cmi.2016.09.007. Epub 2016 Sep 21. No abstract available.


Outbreak of diarrhoeal illness in participants in an obstacle adventure race, Alpes-Maritimes, France, June 2015.

Six C, Aboukais S, Giron S, D'Oliveira JC, Peloux-Petiot F, Franke F, Terrien H, Dassonville F, Deniau J, Ambert-Balay K, Chesnot T, Ruimy R, Pélandakis M, Basset P, Munoz Rivero M, Malfait P.

Euro Surveill. 2016 Jun 9;21(23). doi: 10.2807/1560-7917.ES.2016.21.23.30253.


Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe.

Aanensen DM, Feil EJ, Holden MT, Dordel J, Yeats CA, Fedosejev A, Goater R, Castillo-Ramírez S, Corander J, Colijn C, Chlebowicz MA, Schouls L, Heck M, Pluister G, Ruimy R, Kahlmeter G, Åhman J, Matuschek E, Friedrich AW, Parkhill J, Bentley SD, Spratt BG, Grundmann H; European SRL Working Group.

mBio. 2016 May 5;7(3). pii: e00444-16. doi: 10.1128/mBio.00444-16.


Actinotignum schaalii (formerly Actinobaculum schaalii): a newly recognized pathogen-review of the literature.

Lotte R, Lotte L, Ruimy R.

Clin Microbiol Infect. 2016 Jan;22(1):28-36. doi: 10.1016/j.cmi.2015.10.038. Epub 2015 Nov 11. Review.


Infections related to Actinotignum schaalii (formerly Actinobaculum schaalii): a 3-year prospective observational study on 50 cases.

Lotte L, Lotte R, Durand M, Degand N, Ambrosetti D, Michiels JF, Amiel J, Cattoir V, Ruimy R.

Clin Microbiol Infect. 2016 Apr;22(4):388-390. doi: 10.1016/j.cmi.2015.10.030. Epub 2015 Nov 10. No abstract available.


Comparative dynamics of the emergence of fluoroquinolone resistance in staphylococci from the nasal microbiota of patients treated with fluoroquinolones according to their environment.

Munier AL, de Lastours V, Barbier F, Chau F, Fantin B, Ruimy R.

Int J Antimicrob Agents. 2015 Dec;46(6):653-9. doi: 10.1016/j.ijantimicag.2015.09.004. Epub 2015 Oct 9.


RNY-derived small RNAs as a signature of coronary artery disease.

Repetto E, Lichtenstein L, Hizir Z, Tekaya N, Benahmed M, Ruidavets JB, Zaragosi LE, Perret B, Bouchareychas L, Genoux A, Lotte R, Ruimy R, Ferrières J, Barbry P, Martinez LO, Trabucchi M.

BMC Med. 2015 Oct 8;13:259. doi: 10.1186/s12916-015-0489-y.


Relationship between Distinct African Cholera Epidemics Revealed via MLVA Haplotyping of 337 Vibrio cholerae Isolates.

Moore S, Miwanda B, Sadji AY, Thefenne H, Jeddi F, Rebaudet S, de Boeck H, Bidjada B, Depina JJ, Bompangue D, Abedi AA, Koivogui L, Keita S, Garnotel E, Plisnier PD, Ruimy R, Thomson N, Muyembe JJ, Piarroux R.

PLoS Negl Trop Dis. 2015 Jun 25;9(6):e0003817. doi: 10.1371/journal.pntd.0003817. eCollection 2015.


Infectious endocarditis caused by Helcococcus kunzii in a vascular patient: a case report and literature review.

Lotte R, Lotte L, Degand N, Gaudart A, Gabriel S, Ben H'dech M, Blois M, Rinaldi JP, Ruimy R.

BMC Infect Dis. 2015 Jun 23;15:238. doi: 10.1186/s12879-015-0984-y. Review.


Impact of the 13-valent pneumococcal conjugate vaccine on nasopharyngeal carriage of Streptococcus pneumoniae among children attending group daycare in southeastern France.

Dunais B, Bruno P, Touboul P, Degand N, Sakarovitch C, Fontas E, Haas H, Girard-Pipau F, Ruimy R, Pradier C.

Pediatr Infect Dis J. 2015 Mar;34(3):286-8. doi: 10.1097/INF.0000000000000559.


Diversity of human-associated Methanobrevibacter smithii isolates revealed by multispacer sequence typing.

Nkamga VD, Huynh HT, Aboudharam G, Ruimy R, Drancourt M.

Curr Microbiol. 2015 Jun;70(6):810-5. doi: 10.1007/s00284-015-0787-9. Epub 2015 Feb 24.


Community-acquired pneumonia: impact of empirical antibiotic therapy without respiratory fluoroquinolones nor third-generation cephalosporins.

Pradelli J, Risso K, de Salvador FG, Cua E, Ruimy R, Roger PM.

Eur J Clin Microbiol Infect Dis. 2015 Mar;34(3):511-8. doi: 10.1007/s10096-014-2254-0. Epub 2014 Oct 2.


Lumbar discitis caused by Clostridium perfringens.

Lotte R, Popoff MR, Degand N, Lotte L, Bouvet P, Baudin G, Cua E, Roger PM, Ruimy R.

J Clin Microbiol. 2014 Oct;52(10):3813-5. doi: 10.1128/JCM.00983-14. Epub 2014 Jul 23.


Tuberculosis in the intensive care unit: a descriptive analysis in a low-burden country.

Lanoix JP, Gaudry S, Flicoteaux R, Ruimy R, Wolff M.

Int J Tuberc Lung Dis. 2014 May;18(5):581-7. doi: 10.5588/ijtld.13.0901.


First autochthonous familial cluster of invasive community-acquired leukocidin-positive methicillin-resistant USA300 Staphylococcus aureus in France.

Traore P, Bourgeois-Nicolaos N, Ruimy R, Laurent F, Labrune P, Doucet-Populaire F, Decousser JW.

Folia Microbiol (Praha). 2014 Nov;59(6):473-6. doi: 10.1007/s12223-014-0322-6. Epub 2014 May 24.


A rare case of histopathological bladder necrosis associated with Actinobaculum schaalii: the incremental value of an accurate microbiological diagnosis using 16S rDNA sequencing.

Lotte R, Durand M, Mbeutcha A, Ambrosetti D, Pulcini C, Degand N, Loeffler J, Ruimy R, Amiel J.

Anaerobe. 2014 Apr;26:46-8. doi: 10.1016/j.anaerobe.2014.01.005. Epub 2014 Jan 29.


Rapid detection of glycopeptide-resistant enterococci: impact on decision-making and costs.

Birgand G, Ruimy R, Schwarzinger M, Lolom I, Bendjelloul G, Houhou N, Armand-Lefevre L, Andremont A, Yazdanpanah Y, Lucet JC.

Antimicrob Resist Infect Control. 2013 Nov 4;2(1):30. doi: 10.1186/2047-2994-2-30.


An atypical Clostridium strain related to the Clostridium botulinum group III strain isolated from a human blood culture.

Bouvet P, Ruimy R, Bouchier C, Faucher N, Mazuet C, Popoff MR.

J Clin Microbiol. 2014 Jan;52(1):339-43. doi: 10.1128/JCM.00390-13. Epub 2013 Oct 2.


Determinants of cerebral lesions in endocarditis on systematic cerebral magnetic resonance imaging: a prospective study.

Iung B, Tubiana S, Klein I, Messika-Zeitoun D, Brochet E, Lepage L, Al-Attar N, Ruimy R, Leport C, Wolff M, Duval X; ECHO-IMAGE Study Group.

Stroke. 2013 Nov;44(11):3056-62. doi: 10.1161/STROKEAHA.113.001470. Epub 2013 Sep 3.


Time-to-positivity-based discrimination between Enterobacteriaceae, Pseudomonas aeruginosa and strictly anaerobic Gram-negative bacilli in aerobic and anaerobic blood culture vials.

Defrance G, Birgand G, Ruppé E, Billard M, Ruimy R, Bonnal C, Andremont A, Armand-Lefèvre L.

J Microbiol Methods. 2013 May;93(2):77-9. doi: 10.1016/j.mimet.2013.02.005. Epub 2013 Feb 28.


Clinical outcome after a totally implantable venous access port-related infection in cancer patients: a prospective study and review of the literature.

Lebeaux D, Larroque B, Gellen-Dautremer J, Leflon-Guibout V, Dreyer C, Bialek S, Froissart A, Hentic O, Tessier C, Ruimy R, Pelletier AL, Crestani B, Fournier M, Papo T, Barry B, Zarrouk V, Fantin B.

Medicine (Baltimore). 2012 Nov;91(6):309-18. doi: 10.1097/MD.0b013e318275ffe1. Review.


Pulmonary sequestration syndrome diagnosed from a Nocardia infection.

Foucrier A, Woerther PL, Le Dorze M, Ruimy R, Laissy JP, Castier Y, Mourvillier B.

Am J Respir Crit Care Med. 2012 Aug 1;186(3):288. doi: 10.1164/rccm.201112-2111IM. No abstract available.


Relapsing Mycobacterium genavense infection as a cause of late death in a lung transplant recipient: case report and review of the literature.

Lhuillier E, Brugière O, Veziris N, Danel C, Mourvilliers B, Mal H, Dauriat G, Ruimy R.

Exp Clin Transplant. 2012 Dec;10(6):618-20. doi: 10.6002/ect.2012.0052. Epub 2012 Jul 4. Review.


The importance of colonization pressure in multiresistant Acinetobacter baumannii acquisition in a Greek intensive care unit.

Arvaniti K, Lathyris D, Ruimy R, Haidich AB, Koulourida V, Nikolaidis P, Matamis D, Miyakis S.

Crit Care. 2012 Jun 13;16(3):R102. doi: 10.1186/cc11383.


Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock.

Price LB, Stegger M, Hasman H, Aziz M, Larsen J, Andersen PS, Pearson T, Waters AE, Foster JT, Schupp J, Gillece J, Driebe E, Liu CM, Springer B, Zdovc I, Battisti A, Franco A, Zmudzki J, Schwarz S, Butaye P, Jouy E, Pomba C, Porrero MC, Ruimy R, Smith TC, Robinson DA, Weese JS, Arriola CS, Yu F, Laurent F, Keim P, Skov R, Aarestrup FM.

mBio. 2012 Feb 21;3(1). pii: e00305-11. doi: 10.1128/mBio.00305-11. Print 2012. Erratum in: MBio. 2013;4(1):doi/10.1128/mBio.00520-12.


Respective effects of early cerebral and abdominal magnetic resonance imaging on clinical decisions in infective endocarditis.

Iung B, Klein I, Mourvillier B, Olivot JM, Détaint D, Longuet P, Ruimy R, Fourchy D, Laurichesse JJ, Laissy JP, Escoubet B, Duval X; Study Group.

Eur Heart J Cardiovasc Imaging. 2012 Aug;13(8):703-10. doi: 10.1093/ehjci/jes023. Epub 2012 Feb 14.


Evolution of nasal carriage of methicillin-resistant coagulase-negative staphylococci in a remote population.

Lebeaux D, Barbier F, Angebault C, Benmahdi L, Ruppé E, Felix B, Gaillard K, Djossou F, Epelboin L, Dupont C, Renard M, Peroz G, Vandenesch F, Wolff M, Andremont A, Ruimy R.

Antimicrob Agents Chemother. 2012 Jan;56(1):315-23. doi: 10.1128/AAC.00547-11. Epub 2011 Nov 7.


Development of a phenotypic method for detection of fecal carriage of OXA-48-producing enterobacteriaceae after incidental detection from clinical specimen.

Ruppé E, Armand-Lefèvre L, Lolom I, El Mniai A, Muller-Serieys C, Ruimy R, Woerther PL, Bilariki K, Marre M, Massin P, Andremont A, Lucet JC.

J Clin Microbiol. 2011 Jul;49(7):2761-2. doi: 10.1128/JCM.00055-11. Epub 2011 May 11.

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