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Items: 28

1.

Identification of molecular integrators shows that nitrogen actively controls the phosphate starvation response in plants.

Medici A, Szponarski W, Dangeville P, Safi A, Dissanayake IM, Saenchai C, Emanuel A, Rubio V, Lacombe B, Ruffel S, Tanurdzic M, Rouached H, Krouk G.

Plant Cell. 2019 Mar 14. pii: tpc.00656.2018. doi: 10.1105/tpc.18.00656. [Epub ahead of print]

PMID:
30872321
2.

Nutrient-related Long-Distance Signals: common players and possible crosstalk.

Ruffel S.

Plant Cell Physiol. 2018 Jul 31. doi: 10.1093/pcp/pcy152. [Epub ahead of print]

PMID:
30085239
3.

Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants.

Varala K, Marshall-Colón A, Cirrone J, Brooks MD, Pasquino AV, Léran S, Mittal S, Rock TM, Edwards MB, Kim GJ, Ruffel S, McCombie WR, Shasha D, Coruzzi GM.

Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):6494-6499. doi: 10.1073/pnas.1721487115. Epub 2018 May 16.

4.

Responses to Systemic Nitrogen Signaling in Arabidopsis Roots Involve trans-Zeatin in Shoots.

Poitout A, Crabos A, Petřík I, Novák O, Krouk G, Lacombe B, Ruffel S.

Plant Cell. 2018 Jun;30(6):1243-1257. doi: 10.1105/tpc.18.00011. Epub 2018 May 15.

PMID:
29764985
5.

Nitrate supply to grapevine rootstocks - new genome-wide findings.

Medici A, Lacombe B, Ruffel S.

J Exp Bot. 2017 Jul 10;68(15):3999-4001. doi: 10.1093/jxb/erx273. No abstract available.

6.

The world according to GARP transcription factors.

Safi A, Medici A, Szponarski W, Ruffel S, Lacombe B, Krouk G.

Curr Opin Plant Biol. 2017 Oct;39:159-167. doi: 10.1016/j.pbi.2017.07.006. Epub 2017 Aug 10. Review.

PMID:
28802165
7.

Systemic nutrient signalling: On the road for nitrate.

Ruffel S, Gojon A.

Nat Plants. 2017 Mar 20;3:17040. doi: 10.1038/nplants.2017.40. No abstract available.

PMID:
28319110
8.

Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root.

Ristova D, Carré C, Pervent M, Medici A, Kim GJ, Scalia D, Ruffel S, Birnbaum KD, Lacombe B, Busch W, Coruzzi GM, Krouk G.

Sci Signal. 2016 Oct 25;9(451):rs13.

PMID:
27811143
9.

Long-distance nitrate signaling displays cytokinin dependent and independent branches.

Ruffel S, Poitout A, Krouk G, Coruzzi GM, Lacombe B.

J Integr Plant Biol. 2016 Mar;58(3):226-9. doi: 10.1111/jipb.12453. Epub 2016 Feb 23.

PMID:
26619818
10.

AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip.

Medici A, Marshall-Colon A, Ronzier E, Szponarski W, Wang R, Gojon A, Crawford NM, Ruffel S, Coruzzi GM, Krouk G.

Nat Commun. 2015 Feb 27;6:6274. doi: 10.1038/ncomms7274.

11.

GeneCloud Reveals Semantic Enrichment in Lists of Gene Descriptions.

Krouk G, Carré C, Fizames C, Gojon A, Ruffel S, Lacombe B.

Mol Plant. 2015 Jun;8(6):971-3. doi: 10.1016/j.molp.2015.02.005. Epub 2015 Feb 21. No abstract available.

12.

Signal interactions in the regulation of root nitrate uptake.

Ruffel S, Gojon A, Lejay L.

J Exp Bot. 2014 Oct;65(19):5509-17. doi: 10.1093/jxb/eru321. Epub 2014 Aug 27. Review.

PMID:
25165146
13.

Systems approach identifies TGA1 and TGA4 transcription factors as important regulatory components of the nitrate response of Arabidopsis thaliana roots.

Alvarez JM, Riveras E, Vidal EA, Gras DE, Contreras-López O, Tamayo KP, Aceituno F, Gómez I, Ruffel S, Lejay L, Jordana X, Gutiérrez RA.

Plant J. 2014 Oct;80(1):1-13. doi: 10.1111/tpj.12618. Epub 2014 Aug 25.

14.

Finding a nitrogen niche: a systems integration of local and systemic nitrogen signalling in plants.

Li Y, Krouk G, Coruzzi GM, Ruffel S.

J Exp Bot. 2014 Oct;65(19):5601-10. doi: 10.1093/jxb/eru263. Epub 2014 Jun 24. Review.

PMID:
24963003
15.

TARGET: a transient transformation system for genome-wide transcription factor target discovery.

Bargmann BO, Marshall-Colon A, Efroni I, Ruffel S, Birnbaum KD, Coruzzi GM, Krouk G.

Mol Plant. 2013 May;6(3):978-80. doi: 10.1093/mp/sst010. Epub 2013 Jan 18. No abstract available.

16.

RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis.

Ristova D, Rosas U, Krouk G, Ruffel S, Birnbaum KD, Coruzzi GM.

Plant Physiol. 2013 Mar;161(3):1086-96. doi: 10.1104/pp.112.210872. Epub 2013 Jan 18.

17.

Nitrogen economics of root foraging: transitive closure of the nitrate-cytokinin relay and distinct systemic signaling for N supply vs. demand.

Ruffel S, Krouk G, Ristova D, Shasha D, Birnbaum KD, Coruzzi GM.

Proc Natl Acad Sci U S A. 2011 Nov 8;108(45):18524-9. doi: 10.1073/pnas.1108684108. Epub 2011 Oct 24.

18.

High nitrogen insensitive 9 (HNI9)-mediated systemic repression of root NO3- uptake is associated with changes in histone methylation.

Widiez T, El Kafafi el S, Girin T, Berr A, Ruffel S, Krouk G, Vayssières A, Shen WH, Coruzzi GM, Gojon A, Lepetit M.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13329-34. doi: 10.1073/pnas.1017863108. Epub 2011 Jul 25.

19.

A framework integrating plant growth with hormones and nutrients.

Krouk G, Ruffel S, Gutiérrez RA, Gojon A, Crawford NM, Coruzzi GM, Lacombe B.

Trends Plant Sci. 2011 Apr;16(4):178-82. doi: 10.1016/j.tplants.2011.02.004. Epub 2011 Mar 9.

PMID:
21393048
20.

Adaptation of Medicago truncatula to nitrogen limitation is modulated via local and systemic nodule developmental responses.

Jeudy C, Ruffel S, Freixes S, Tillard P, Santoni AL, Morel S, Journet EP, Duc G, Gojon A, Lepetit M, Salon C.

New Phytol. 2010 Feb;185(3):817-28. doi: 10.1111/j.1469-8137.2009.03103.x. Epub 2009 Dec 15.

21.

A systems view of responses to nutritional cues in Arabidopsis: toward a paradigm shift for predictive network modeling.

Ruffel S, Krouk G, Coruzzi GM.

Plant Physiol. 2010 Feb;152(2):445-52. doi: 10.1104/pp.109.148502. Epub 2009 Nov 25. No abstract available.

22.

Systemic signaling of the plant nitrogen status triggers specific transcriptome responses depending on the nitrogen source in Medicago truncatula.

Ruffel S, Freixes S, Balzergue S, Tillard P, Jeudy C, Martin-Magniette ML, van der Merwe MJ, Kakar K, Gouzy J, Fernie AR, Udvardi M, Salon C, Gojon A, Lepetit M.

Plant Physiol. 2008 Apr;146(4):2020-35. doi: 10.1104/pp.107.115667. Epub 2008 Feb 20.

23.

Simultaneous mutations in translation initiation factors eIF4E and eIF(iso)4E are required to prevent pepper veinal mottle virus infection of pepper.

Ruffel S, Gallois JL, Moury B, Robaglia C, Palloix A, Caranta C.

J Gen Virol. 2006 Jul;87(Pt 7):2089-98.

PMID:
16760413
24.

The recessive potyvirus resistance gene pot-1 is the tomato orthologue of the pepper pvr2-eIF4E gene.

Ruffel S, Gallois JL, Lesage ML, Caranta C.

Mol Genet Genomics. 2005 Nov;274(4):346-53. Epub 2005 Jun 22.

PMID:
15971038
25.

Structural analysis of the eukaryotic initiation factor 4E gene controlling potyvirus resistance in pepper: exploitation of a BAC library.

Ruffel S, Caranta C, Palloix A, Lefebvre V, Caboche M, Bendahmane A.

Gene. 2004 Sep 1;338(2):209-16.

PMID:
15315824
26.

Targeted mapping of a sugarcane rust resistance gene (Bru1) using bulked segregant analysis and AFLP markers.

Asnaghi C, Roques D, Ruffel S, Kaye C, Hoarau JY, Télismart H, Girard JC, Raboin LM, Risterucci AM, Grivet L, D'Hont A.

Theor Appl Genet. 2004 Feb;108(4):759-64. Epub 2003 Oct 28.

PMID:
14586507
27.

Recessive resistance genes against potyviruses are localized in colinear genomic regions of the tomato ( Lycopersicon spp.) and pepper ( Capsicum spp.) genomes.

Parrella G, Ruffel S, Moretti A, Morel C, Palloix A, Caranta C.

Theor Appl Genet. 2002 Nov;105(6-7):855-861. Epub 2002 Jul 30.

PMID:
12582910
28.

A natural recessive resistance gene against potato virus Y in pepper corresponds to the eukaryotic initiation factor 4E (eIF4E).

Ruffel S, Dussault MH, Palloix A, Moury B, Bendahmane A, Robaglia C, Caranta C.

Plant J. 2002 Dec;32(6):1067-75.

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