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Items: 1 to 50 of 141

1.

Transitions in paternal social status predict patterns of offspring growth and metabolic transcription.

Cauceglia JW, Nelson AC, Rubinstein ND, Kukreja S, Sasso LN, Beaufort JA, Rando OJ, Potts WK.

Mol Ecol. 2020 Feb;29(3):624-638. doi: 10.1111/mec.15346. Epub 2020 Jan 19.

PMID:
31885115
2.

Murine single-cell RNA-seq reveals cell-identity- and tissue-specific trajectories of aging.

Kimmel JC, Penland L, Rubinstein ND, Hendrickson DG, Kelley DR, Rosenthal AZ.

Genome Res. 2019 Dec;29(12):2088-2103. doi: 10.1101/gr.253880.119. Epub 2019 Nov 21.

3.

Single-cell transcriptomics of the naked mole-rat reveals unexpected features of mammalian immunity.

Hilton HG, Rubinstein ND, Janki P, Ireland AT, Bernstein N, Fong NL, Wright KM, Smith M, Finkle D, Martin-McNulty B, Roy M, Imai DM, Jojic V, Buffenstein R.

PLoS Biol. 2019 Nov 21;17(11):e3000528. doi: 10.1371/journal.pbio.3000528. eCollection 2019 Nov.

4.

Retrospective study of the success of dental implants placed in HIV-positive patients.

Rubinstein NC, Jacobson Z, McCausland GL, Dibart S.

Int J Implant Dent. 2019 Jun 13;5(1):30. doi: 10.1186/s40729-019-0174-6.

5.

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata.

Armaleo D, Müller O, Lutzoni F, Andrésson ÓS, Blanc G, Bode HB, Collart FR, Dal Grande F, Dietrich F, Grigoriev IV, Joneson S, Kuo A, Larsen PE, Logsdon JM Jr, Lopez D, Martin F, May SP, McDonald TR, Merchant SS, Miao V, Morin E, Oono R, Pellegrini M, Rubinstein N, Sanchez-Puerta MV, Savelkoul E, Schmitt I, Slot JC, Soanes D, Szövényi P, Talbot NJ, Veneault-Fourrey C, Xavier BB.

BMC Genomics. 2019 Jul 23;20(1):605. doi: 10.1186/s12864-019-5629-x.

6.

First-Year Radiology Residents Teaching Anatomy to First-Year Medical Students: A Symbiotic Relationship.

Shah P, Zuckerman SP, Thompson C, Pantel AR, Rubinstein NA, Galperin-Aizenberg M, Scanlon MH, Nachiappan AC.

Curr Probl Diagn Radiol. 2019 Feb 10. pii: S0363-0188(18)30290-1. doi: 10.1067/j.cpradiol.2019.02.006. [Epub ahead of print]

PMID:
31010694
7.

eIF2B activator prevents neurological defects caused by a chronic integrated stress response.

Wong YL, LeBon L, Basso AM, Kohlhaas KL, Nikkel AL, Robb HM, Donnelly-Roberts DL, Prakash J, Swensen AM, Rubinstein ND, Krishnan S, McAllister FE, Haste NV, O'Brien JJ, Roy M, Ireland A, Frost JM, Shi L, Riedmaier S, Martin K, Dart MJ, Sidrauski C.

Elife. 2019 Jan 9;8. pii: e42940. doi: 10.7554/eLife.42940.

8.

Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region.

Moffitt JR, Bambah-Mukku D, Eichhorn SW, Vaughn E, Shekhar K, Perez JD, Rubinstein ND, Hao J, Regev A, Dulac C, Zhuang X.

Science. 2018 Nov 16;362(6416). pii: eaau5324. doi: 10.1126/science.aau5324. Epub 2018 Nov 1.

9.

Correction to: A window into extreme longevity; the circulating metabolomic signature of the naked mole-rat, a mammal that shows negligible senescence.

Lewis KN, Rubinstein ND, Buffenstein R.

Geroscience. 2018 Jun;40(3):357-358. doi: 10.1007/s11357-018-0023-1.

10.

R-spondin3 Is Associated with Basal-Progenitor Behavior in Normal and Tumor Mammary Cells.

Tocci JM, Felcher CM, García Solá ME, Goddio MV, Zimberlin MN, Rubinstein N, Srebrow A, Coso OA, Abba MC, Meiss RP, Kordon EC.

Cancer Res. 2018 Aug 15;78(16):4497-4511. doi: 10.1158/0008-5472.CAN-17-2676. Epub 2018 May 10.

11.

A window into extreme longevity; the circulating metabolomic signature of the naked mole-rat, a mammal that shows negligible senescence.

Lewis KN, Rubinstein ND, Buffenstein R.

Geroscience. 2018 Apr;40(2):105-121. doi: 10.1007/s11357-018-0014-2. Epub 2018 Apr 20. Erratum in: Geroscience. 2018 May 31;:.

12.

Functional circuit architecture underlying parental behaviour.

Kohl J, Babayan BM, Rubinstein ND, Autry AE, Marin-Rodriguez B, Kapoor V, Miyamishi K, Zweifel LS, Luo L, Uchida N, Dulac C.

Nature. 2018 Apr;556(7701):326-331. doi: 10.1038/s41586-018-0027-0. Epub 2018 Apr 11.

13.

Angiotensin-(1-7) counteracts the transforming effects triggered by angiotensin II in breast cancer cells.

Cambados N, Walther T, Nahmod K, Tocci JM, Rubinstein N, Böhme I, Simian M, Sampayo R, Del Valle Suberbordes M, Kordon EC, Schere-Levy C.

Oncotarget. 2017 Jul 17;8(51):88475-88487. doi: 10.18632/oncotarget.19290. eCollection 2017 Oct 24.

14.

In Search of the Perfect Photocage: Structure-Reactivity Relationships in meso-Methyl BODIPY Photoremovable Protecting Groups.

Slanina T, Shrestha P, Palao E, Kand D, Peterson JA, Dutton AS, Rubinstein N, Weinstain R, Winter AH, Klán P.

J Am Chem Soc. 2017 Oct 25;139(42):15168-15175. doi: 10.1021/jacs.7b08532. Epub 2017 Oct 17.

PMID:
29039200
15.

Benign and tumor parenchyma metabolomic profiles affect compensatory renal growth in renal cell carcinoma surgical patients.

Rosenzweig B, Rubinstein ND, Reznik E, Shingarev R, Juluru K, Akin O, Hsieh JJ, Jaimes EA, Russo P, Susztak K, Coleman JA, Hakimi AA.

PLoS One. 2017 Jul 20;12(7):e0180350. doi: 10.1371/journal.pone.0180350. eCollection 2017.

16.

The Multipartite Mitochondrial Genome of Enteromyxum leei (Myxozoa): Eight Fast-Evolving Megacircles.

Yahalomi D, Haddas-Sasson M, Rubinstein ND, Feldstein T, Diamant A, Huchon D.

Mol Biol Evol. 2017 Jul 1;34(7):1551-1556. doi: 10.1093/molbev/msx072.

PMID:
28333349
17.

New Perspectives on Genomic Imprinting, an Essential and Multifaceted Mode of Epigenetic Control in the Developing and Adult Brain.

Perez JD, Rubinstein ND, Dulac C.

Annu Rev Neurosci. 2016 Jul 8;39:347-84. doi: 10.1146/annurev-neuro-061010-113708. Epub 2016 Apr 25. Review.

18.

Incorporating Spatial Models in Visual Field Test Procedures.

Rubinstein NJ, McKendrick AM, Turpin A.

Transl Vis Sci Technol. 2016 Mar 11;5(2):7. eCollection 2016 Mar.

19.

RUNX1 and FOXP3 interplay regulates expression of breast cancer related genes.

Recouvreux MS, Grasso EN, Echeverria PC, Rocha-Viegas L, Castilla LH, Schere-Levy C, Tocci JM, Kordon EC, Rubinstein N.

Oncotarget. 2016 Feb 9;7(6):6552-65. doi: 10.18632/oncotarget.6771.

20.

Regulation of alternative splicing at the single-cell level.

Faigenbloom L, Rubinstein ND, Kloog Y, Mayrose I, Pupko T, Stein R.

Mol Syst Biol. 2015 Dec 28;11(12):845. doi: 10.15252/msb.20156278.

21.

Genomic insights into the evolutionary origin of Myxozoa within Cnidaria.

Chang ES, Neuhof M, Rubinstein ND, Diamant A, Philippe H, Huchon D, Cartwright P.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14912-7. doi: 10.1073/pnas.1511468112. Epub 2015 Nov 16.

22.

Quantitative and functional interrogation of parent-of-origin allelic expression biases in the brain.

Perez JD, Rubinstein ND, Fernandez DE, Santoro SW, Needleman LA, Ho-Shing O, Choi JJ, Zirlinger M, Chen SK, Liu JS, Dulac C.

Elife. 2015 Jul 3;4:e07860. doi: 10.7554/eLife.07860.

23.

meso-Methylhydroxy BODIPY: a scaffold for photo-labile protecting groups.

Rubinstein N, Liu P, Miller EW, Weinstain R.

Chem Commun (Camb). 2015 Apr 14;51(29):6369-72. doi: 10.1039/c5cc00550g.

PMID:
25761909
24.

Diversity and evolution of myxozoan minicollagens and nematogalectins.

Shpirer E, Chang ES, Diamant A, Rubinstein N, Cartwright P, Huchon D.

BMC Evol Biol. 2014 Sep 29;14:205. doi: 10.1186/s12862-014-0205-0.

25.

Localization of luteinizing hormone receptor protein in the human ovary.

Yung Y, Aviel-Ronen S, Maman E, Rubinstein N, Avivi C, Orvieto R, Hourvitz A.

Mol Hum Reprod. 2014 Sep;20(9):844-9. doi: 10.1093/molehr/gau041. Epub 2014 May 29.

PMID:
24874553
26.

The effects of ageing and visual field loss on pointing to visual targets.

Rubinstein NJ, Anderson AJ, Ma-Wyatt A, Walland MJ, McKendrick AM.

PLoS One. 2014 May 16;9(5):e97190. doi: 10.1371/journal.pone.0097190. eCollection 2014.

27.

Establishment and validation of a model for non-luteinized human mural granulosa cell culture.

Ophir L, Yung Y, Maman E, Rubinstein N, Yerushalmi GM, Haas J, Barzilay E, Hourvitz A.

Mol Cell Endocrinol. 2014 Mar 25;384(1-2):165-74. doi: 10.1016/j.mce.2014.01.018. Epub 2014 Feb 5.

PMID:
24508664
28.

Progesterone antagonist, RU486, represses LHCGR expression and LH/hCG signaling in cultured luteinized human mural granulosa cells.

Yung Y, Maman E, Ophir L, Rubinstein N, Barzilay E, Yerushalmi GM, Hourvitz A.

Gynecol Endocrinol. 2014 Jan;30(1):42-7. doi: 10.3109/09513590.2013.848426. Epub 2013 Oct 22.

PMID:
24147854
29.

Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes.

Rubinstein ND, Feldstein T, Shenkar N, Botero-Castro F, Griggio F, Mastrototaro F, Delsuc F, Douzery EJ, Gissi C, Huchon D.

Genome Biol Evol. 2013;5(6):1185-99. doi: 10.1093/gbe/evt081.

30.

Disrupting galectin-1 interactions with N-glycans suppresses hypoxia-driven angiogenesis and tumorigenesis in Kaposi's sarcoma.

Croci DO, Salatino M, Rubinstein N, Cerliani JP, Cavallin LE, Leung HJ, Ouyang J, Ilarregui JM, Toscano MA, Domaica CI, Croci MC, Shipp MA, Mesri EA, Albini A, Rabinovich GA.

J Exp Med. 2012 Oct 22;209(11):1985-2000. doi: 10.1084/jem.20111665. Epub 2012 Oct 1.

31.

Galectin-1 confers immune privilege to human trophoblast: implications in recurrent fetal loss.

Ramhorst RE, Giribaldi L, Fraccaroli L, Toscano MA, Stupirski JC, Romero MD, Durand ES, Rubinstein N, Blaschitz A, Sedlmayr P, Genti-Raimondi S, Fainboim L, Rabinovich GA.

Glycobiology. 2012 Oct;22(10):1374-86. doi: 10.1093/glycob/cws104. Epub 2012 Jun 28.

PMID:
22752006
32.

The interface of protein structure, protein biophysics, and molecular evolution.

Liberles DA, Teichmann SA, Bahar I, Bastolla U, Bloom J, Bornberg-Bauer E, Colwell LJ, de Koning AP, Dokholyan NV, Echave J, Elofsson A, Gerloff DL, Goldstein RA, Grahnen JA, Holder MT, Lakner C, Lartillot N, Lovell SC, Naylor G, Perica T, Pollock DD, Pupko T, Regan L, Roger A, Rubinstein N, Shakhnovich E, Sjölander K, Sunyaev S, Teufel AI, Thorne JL, Thornton JW, Weinreich DM, Whelan S.

Protein Sci. 2012 Jun;21(6):769-85. doi: 10.1002/pro.2071. Epub 2012 Apr 23. Review.

33.

Evolutionary models accounting for layers of selection in protein-coding genes and their impact on the inference of positive selection.

Rubinstein ND, Doron-Faigenboim A, Mayrose I, Pupko T.

Mol Biol Evol. 2011 Dec;28(12):3297-308. doi: 10.1093/molbev/msr162. Epub 2011 Jun 20.

PMID:
21690564
34.

The operonic location of auto-transcriptional repressors is highly conserved in bacteria.

Rubinstein ND, Zeevi D, Oren Y, Segal G, Pupko T.

Mol Biol Evol. 2011 Dec;28(12):3309-18. doi: 10.1093/molbev/msr163. Epub 2011 Jun 20.

PMID:
21690561
35.

Glucocorticoid alternative effects on proliferating and differentiated mammary epithelium are associated to opposite regulation of cell-cycle inhibitor expression.

Hoijman E, Rocha-Viegas L, Kalko SG, Rubinstein N, Morales-Ruiz M, Joffé EB, Kordon EC, Pecci A.

J Cell Physiol. 2012 Apr;227(4):1721-30. doi: 10.1002/jcp.22896.

PMID:
21688264
36.

Optokinetic nystagmus suppression as an index of the allocation of visual attention.

Rubinstein NJ, Abel LA.

Invest Ophthalmol Vis Sci. 2011 Jan 21;52(1):462-7. doi: 10.1167/iovs.10-6016.

PMID:
20811052
37.

Identification of the neuromuscular junction transcriptome of extraocular muscle by laser capture microdissection.

Ketterer C, Zeiger U, Budak MT, Rubinstein NA, Khurana TS.

Invest Ophthalmol Vis Sci. 2010 Sep;51(9):4589-99. doi: 10.1167/iovs.09-4893. Epub 2010 Apr 14.

38.

Epitopia: a web-server for predicting B-cell epitopes.

Rubinstein ND, Mayrose I, Martz E, Pupko T.

BMC Bioinformatics. 2009 Sep 14;10:287. doi: 10.1186/1471-2105-10-287.

39.

Mechanical strain induces involution-associated events in mammary epithelial cells.

Quaglino A, Salierno M, Pellegrotti J, Rubinstein N, Kordon EC.

BMC Cell Biol. 2009 Jul 17;10:55. doi: 10.1186/1471-2121-10-55.

40.

Gene expression in the lamellar dermis-epidermis during the developmental phase of carbohydrate overload-induced laminitis in the horse.

Budak MT, Orsini JA, Pollitt CC, Rubinstein NA.

Vet Immunol Immunopathol. 2009 Sep 15;131(1-2):86-96. doi: 10.1016/j.vetimm.2009.03.019. Epub 2009 Apr 5. Erratum in: Vet Immunol Immunopathol. 2010 Aug 15;136(3-4):357.

PMID:
19380162
41.

Influence of hyperthyroid conditions on gene expression in extraocular muscles of rats.

Postler TS, Budak MT, Khurana TS, Rubinstein NA.

Physiol Genomics. 2009 May 13;37(3):231-8. doi: 10.1152/physiolgenomics.00023.2009. Epub 2009 Mar 10.

42.

Transcriptional and functional differences in stem cell populations isolated from extraocular and limb muscles.

Pacheco-Pinedo EC, Budak MT, Zeiger U, Jørgensen LH, Bogdanovich S, Schrøder HD, Rubinstein NA, Khurana TS.

Physiol Genomics. 2009 Mar 3;37(1):35-42. doi: 10.1152/physiolgenomics.00051.2008. Epub 2008 Dec 30.

43.

Evolutionary modeling of rate shifts reveals specificity determinants in HIV-1 subtypes.

Penn O, Stern A, Rubinstein ND, Dutheil J, Bacharach E, Galtier N, Pupko T.

PLoS Comput Biol. 2008 Nov;4(11):e1000214. doi: 10.1371/journal.pcbi.1000214. Epub 2008 Nov 7.

44.

A machine-learning approach for predicting B-cell epitopes.

Rubinstein ND, Mayrose I, Pupko T.

Mol Immunol. 2009 Feb;46(5):840-7. doi: 10.1016/j.molimm.2008.09.009. Epub 2008 Oct 22.

PMID:
18947876
45.

A likelihood framework to analyse phyletic patterns.

Cohen O, Rubinstein ND, Stern A, Gophna U, Pupko T.

Philos Trans R Soc Lond B Biol Sci. 2008 Dec 27;363(1512):3903-11. doi: 10.1098/rstb.2008.0177.

46.

Rapid disuse atrophy of diaphragm fibers in mechanically ventilated humans.

Levine S, Nguyen T, Taylor N, Friscia ME, Budak MT, Rothenberg P, Zhu J, Sachdeva R, Sonnad S, Kaiser LR, Rubinstein NA, Powers SK, Shrager JB.

N Engl J Med. 2008 Mar 27;358(13):1327-35. doi: 10.1056/NEJMoa070447.

47.

Computational characterization of B-cell epitopes.

Rubinstein ND, Mayrose I, Halperin D, Yekutieli D, Gershoni JM, Pupko T.

Mol Immunol. 2008 Jul;45(12):3477-89. Epub 2007 Nov 26.

PMID:
18023478
48.

Pepitope: epitope mapping from affinity-selected peptides.

Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund NT, Bublil EM, Ruppin E, Sharan R, Gershoni JM, Martz E, Pupko T.

Bioinformatics. 2007 Dec 1;23(23):3244-6. Epub 2007 Oct 31.

49.

Combination of peptide OFFGEL fractionation and label-free quantitation facilitated proteomics profiling of extraocular muscle.

Fraterman S, Zeiger U, Khurana TS, Rubinstein NA, Wilm M.

Proteomics. 2007 Sep;7(18):3404-16.

PMID:
17708596
50.

Ets-2 repressor factor silences extrasynaptic utrophin by N-box mediated repression in skeletal muscle.

Perkins KJ, Basu U, Budak MT, Ketterer C, Baby SM, Lozynska O, Lunde JA, Jasmin BJ, Rubinstein NA, Khurana TS.

Mol Biol Cell. 2007 Aug;18(8):2864-72. Epub 2007 May 16.

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