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Cell Wall Hydrolytic Enzymes Enhance Antimicrobial Drug Activity Against Mycobacterium.

Gustine JN, Au MB, Haserick JR, Hett EC, Rubin EJ, Gibson FC 3rd, Deng LL.

Curr Microbiol. 2019 Jan 2. doi: 10.1007/s00284-018-1620-z. [Epub ahead of print]


Seamless Designs: Current Practice and Considerations for Early-Phase Drug Development in Oncology.

Hobbs BP, Barata PC, Kanjanapan Y, Paller CJ, Perlmutter J, Pond GR, Prowell TM, Rubin EH, Seymour LK, Wages NA, Yap TA, Feltquate D, Garrett-Mayer E, Grossman W, Hong DS, Ivy SP, Siu LL, Reeves SA, Rosner GL.

J Natl Cancer Inst. 2018 Dec 17. doi: 10.1093/jnci/djy196. [Epub ahead of print]


Inhibition of Pseudomonas aeruginosa and Mycobacterium tuberculosis disulfide bond forming enzymes.

Cristina L, McPartland L, Tran NQ, Meehan BM, Zhang Y, Tanweer Z, Wakabayashi S, Rock J, Kim T, Balasubramanian D, Audette R, Toosky M, Pinkham J, Rubin EJ, Lory S, Pier G, Boyd D, Beckwith J.

Mol Microbiol. 2018 Dec 17. doi: 10.1111/mmi.14185. [Epub ahead of print]


Spontaneous Regression of Metastatic Pancreatic Cancer: A Role for Recurrent Inflammation.

Ibrahimi S, Mukherjee S, Alhyari L, Rubin E, Aljumaily R.

Pancreas. 2019 Jan;48(1):e4-e6. doi: 10.1097/MPA.0000000000001193. No abstract available.


High Herpesvirus Diversity in Wild Rodent and Shrew Species in Central Africa.

Ntumvi NF, Mbala Kingebeni P, Tamoufe U, Kumakamba C, Ndze V, Ngay Lukusa I, LeBreton M, Atibu Losoma J, Le Doux Diffo J, N'Kawa F, Takuo JM, Mulembakani P, Nwobegahay J, Makuwa M, Muyembe Tamfum JJ, Gillis A, Harris S, Rimoin AW, Hoff NA, Fair JM, Monagin C, Ayukekbong J, Rubin EM, Wolfe ND, Lange CE.

Intervirology. 2018 Nov 16:1-11. doi: 10.1159/000493796. [Epub ahead of print]


Molecular Profiling of Cohorts of Tumor Samples to Guide Clinical Development of Pembrolizumab as Monotherapy.

Ayers M, Nebozhyn M, Cristescu R, McClanahan TK, Perini R, Rubin E, Cheng JD, Kaufman DR, Loboda A.

Clin Cancer Res. 2018 Nov 15. doi: 10.1158/1078-0432.CCR-18-1316. [Epub ahead of print]


Author Correction: Rhizosphere microbiome structure alters to enable wilt resistance in tomato.

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA, Choi SY, Seo M, Lee HJ, Jung EJ, Park H, Roy N, Kim H, Lee MM, Rubin EM, Lee SW, Kim JF.

Nat Biotechnol. 2018 Nov 9;36(11):1117. doi: 10.1038/nbt1118-1117. No abstract available.


Author Correction: The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Dec;3(12):1486. doi: 10.1038/s41564-018-0315-3.


Moving Toward Tuberculosis Elimination: Critical Issues for Research in Diagnostics and Therapeutics for Tuberculosis Infection.

Keshavjee S, Amanullah F, Cattamanchi A, Chaisson R, Dobos KM, Fox GJ, Gendelman HE, Gordon R, Hesseling A, Hoi LV, Kampmann B, Kana B, Khuller G, Lewinsohn DM, Lewinsohn DA, Lin PL, Lu LL, Maartens G, Owen A, Protopopova M, Rengarajan J, Rubin E, Salgame P, Schurr E, Seddon JA, Swindells S, Tobin DM, Udwadia Z, Walzl G, Srinivasan S, Rustomjee R, Nahid P.

Am J Respir Crit Care Med. 2018 Oct 18. doi: 10.1164/rccm.201806-1053PP. [Epub ahead of print]


Social motivational processing and interpersonal function in aging cocaine smokers.

Bedi G, Hao X, Van Dam NT, Cooper ZD, Rubin E, Vadhan NP, Marino L, Haney M.

Addict Biol. 2018 Oct 17. doi: 10.1111/adb.12669. [Epub ahead of print]


Maturing Mycobacterium smegmatis peptidoglycan requires non-canonical crosslinks to maintain shape.

Baranowski C, Welsh MA, Sham LT, Eskandarian HA, Lim HC, Kieser KJ, Wagner JC, McKinney JD, Fantner GE, Ioerger TR, Walker S, Bernhardt TG, Rubin EJ, Rego EH.

Elife. 2018 Oct 16;7. pii: e37516. doi: 10.7554/eLife.37516.


Mitochondrial fusion and Bid-mediated mitochondrial apoptosis are perturbed by alcohol with distinct dependence on its metabolism.

Naghdi S, Slovinsky WS, Madesh M, Rubin E, Hajnóczky G.

Cell Death Dis. 2018 Oct 9;9(10):1028. doi: 10.1038/s41419-018-1070-3.


Best Practices in North American Pre-Clinical Medical Education in Sexual History Taking: Consensus From the Summits in Medical Education in Sexual Health.

Rubin ES, Rullo J, Tsai P, Criniti S, Elders J, Thielen JM, Parish SJ.

J Sex Med. 2018 Oct;15(10):1414-1425. doi: 10.1016/j.jsxm.2018.08.008. Review.


Rhizosphere microbiome structure alters to enable wilt resistance in tomato.

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA, Choi SY, Seo M, Lee HJ, Jung EJ, Park H, Roy N, Kim H, Lee MM, Rubin EM, Lee SW, Kim JF.

Nat Biotechnol. 2018 Oct 8. doi: 10.1038/nbt.4232. [Epub ahead of print]


An Ethical Framework for the Care of Patients with Prolonged Hospitalization Following Lung Transplantation.

Courtwright AM, Rubin E, Robinson EM, El-Chemaly S, Lamas D, Diamond JM, Goldberg HJ.

HEC Forum. 2018 Sep 19. doi: 10.1007/s10730-018-9364-5. [Epub ahead of print]


Pandemics: Risks, Impacts, and Mitigation.

Madhav N, Oppenheim B, Gallivan M, Mulembakani P, Rubin E, Wolfe N.

In: Jamison DT, Gelband H, Horton S, Jha P, Laxminarayan R, Mock CN, Nugent R, editors. Disease Control Priorities: Improving Health and Reducing Poverty. 3rd edition. Washington (DC): The International Bank for Reconstruction and Development / The World Bank; 2017 Nov 27. Chapter 17.



Bloom BR, Atun R, Cohen T, Dye C, Fraser H, Gomez GB, Knight G, Murray M, Nardell E, Rubin E, Salomon J, Vassall A, Volchenkov G, White R, Wilson D, Yadav P.

In: Holmes KK, Bertozzi S, Bloom BR, Jha P, editors. Major Infectious Diseases. 3rd edition. Washington (DC): The International Bank for Reconstruction and Development / The World Bank; 2017 Nov 3. Chapter 11.


Patient-centered Outcomes Research in Pulmonary, Critical Care, and Sleep Medicine. An Official American Thoracic Society Workshop Report.

Feemster LC, Saft HL, Bartlett SJ, Parthasarathy S, Barnes T, Calverley P, Curtis JR, Hickam DH, Mularski RA, Au DH, Chlan LL, Reinke LF, Cooke CR, Cox CE, Krishnan JA, Rubin E, Shah S, Sullivan DR, Kross EK; American Thoracic Society Behavioral Sciences and Health Services Research Assembly and Nursing Assembly.

Ann Am Thorac Soc. 2018 Sep;15(9):1005-1015. doi: 10.1513/AnnalsATS.201806-406WS.


Perspective review on solid-organ transplant: needs in point-of-care optical biomarkers.

Piao D, Hawxby A, Wright H, Rubin EM.

J Biomed Opt. 2018 Aug;23(8):1-14. doi: 10.1117/1.JBO.23.8.080601.


Of MICs and Men.

Rubin EJ.

N Engl J Med. 2018 Aug 30;379(9):882-883. doi: 10.1056/NEJMe1808564. No abstract available.


Kasugamycin potentiates rifampicin and limits emergence of resistance in Mycobacterium tuberculosis by specifically decreasing mycobacterial mistranslation.

Chaudhuri S, Li L, Zimmerman M, Chen Y, Chen YX, Toosky MN, Gardner M, Pan M, Li YY, Kawaji Q, Zhu JH, Su HW, Martinot AJ, Rubin EJ, Dartois VA, Javid B.

Elife. 2018 Aug 28;7. pii: e36782. doi: 10.7554/eLife.36782.


The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses.

Goldstein T, Anthony SJ, Gbakima A, Bird BH, Bangura J, Tremeau-Bravard A, Belaganahalli MN, Wells HL, Dhanota JK, Liang E, Grodus M, Jangra RK, DeJesus VA, Lasso G, Smith BR, Jambai A, Kamara BO, Kamara S, Bangura W, Monagin C, Shapira S, Johnson CK, Saylors K, Rubin EM, Chandran K, Lipkin WI, Mazet JAK.

Nat Microbiol. 2018 Oct;3(10):1084-1089. doi: 10.1038/s41564-018-0227-2. Epub 2018 Aug 27. Erratum in: Nat Microbiol. 2018 Dec;3(12):1486.


Enterotoxigenic E. coli virulence gene regulation in human infections.

Crofts AA, Giovanetti SM, Rubin EJ, Poly FM, Gutiérrez RL, Talaat KR, Porter CK, Riddle MS, DeNearing B, Brubaker J, Maciel M Jr, Alcala AN, Chakraborty S, Prouty MG, Savarino SJ, Davies BW, Trent MS.

Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):E8968-E8976. doi: 10.1073/pnas.1808982115. Epub 2018 Aug 20.


Effects of capsule on surface diffuse reflectance spectroscopy of the subcapsular parenchyma of a solid organ.

Piao D, Borron H, Hawxby A, Wright H, Rubin EM.

J Biomed Opt. 2018 Jul;23(12):1-23. doi: 10.1117/1.JBO.23.12.121602.


Pembrolizumab KEYNOTE-001: an adaptive study leading to accelerated approval for two indications and a companion diagnostic.

Kang SP, Gergich K, Lubiniecki GM, de Alwis DP, Chen C, Tice MAB, Rubin EH.

Ann Oncol. 2017 Jun 1;28(6):1388-1398. doi: 10.1093/annonc/mdx076. No abstract available.


In-hospital and subsequent mortality among lung transplant recipients with a prolonged initial hospitalization.

Courtwright AM, Rubin E, Robinson EM, Thomasson A, El-Chemaly S, Diamond JM, Goldberg HJ.

Am J Transplant. 2018 Jun 25. doi: 10.1111/ajt.14982. [Epub ahead of print]


Informing the Tolerability of Cancer Treatments Using Patient-Reported Outcome Measures: Summary of an FDA and Critical Path Institute Workshop.

Kluetz PG, Kanapuru B, Lemery S, Johnson LL, Fiero MH, Arscott K, Barbachano Y, Basch E, Campbell M, Cappelleri JC, Cella D, Cleeland C, Coens C, Daniels S, Denlinger CS, Fairclough DL, Hillard JR, Minasian L, Mitchell SA, O'Connor D, Patel S, Rubin EH, Ryden A, Soltys K, Sridhara R, Thanarajasingam G, Velikova G, Coons SJ.

Value Health. 2018 Jun;21(6):742-747. doi: 10.1016/j.jval.2017.09.009. Epub 2017 Nov 7.


Building a global atlas of zoonotic viruses.

Carroll D, Watson B, Togami E, Daszak P, Mazet JA, Chrisman CJ, Rubin EM, Wolfe N, Morel CM, Gao GF, Burci GL, Fukuda K, Auewarakul P, Tomori O.

Bull World Health Organ. 2018 Apr 1;96(4):292-294. doi: 10.2471/BLT.17.205005. Epub 2018 Mar 5. No abstract available.


Systems Analysis of Physical Absorption of CO2 in Ionic Liquids for Pre-Combustion Carbon Capture.

Zhai H, Rubin ES.

Environ Sci Technol. 2018 Apr 17;52(8):4996-5004. doi: 10.1021/acs.est.8b00411. Epub 2018 Apr 9.


DNA indicative of human bocaviruses detected in non-human primates in the Democratic Republic of the Congo.

Kumakamba C, Ngay Lukusa I, Mbala Kingebeni P, N'Kawa F, Atibu Losoma J, Mulembakani PM, Makuwa M, Muyembe Tamfum JJ, Belais R, Gillis A, Harris S, Rimoin AW, Hoff NA, Fair JN, Monagin C, Ayukekbong J, Rubin EM, Wolfe ND, Lange CE.

J Gen Virol. 2018 May;99(5):676-681. doi: 10.1099/jgv.0.001048. Epub 2018 Mar 27.


Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.

Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D; Hungate1000 project collaborators, Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ.

Nat Biotechnol. 2018 Apr;36(4):359-367. doi: 10.1038/nbt.4110. Epub 2018 Mar 19.


Residual Symptoms After Treatment for Depression in Patients With Coronary Heart Disease.

Carney RM, Freedland KE, Steinmeyer BC, Rubin EH, Rich MW.

Psychosom Med. 2018 May;80(4):385-392. doi: 10.1097/PSY.0000000000000570.


Development of MK-8353, an orally administered ERK1/2 inhibitor, in patients with advanced solid tumors.

Moschos SJ, Sullivan RJ, Hwu WJ, Ramanathan RK, Adjei AA, Fong PC, Shapira-Frommer R, Tawbi HA, Rubino J, Rush TS 3rd, Zhang D, Miselis NR, Samatar AA, Chun P, Rubin EH, Schiller J, Long BJ, Dayananth P, Carr D, Kirschmeier P, Bishop WR, Deng Y, Cooper A, Shipps GW, Moreno BH, Robert L, Ribas A, Flaherty KT.

JCI Insight. 2018 Feb 22;3(4). pii: 92352. doi: 10.1172/jci.insight.92352. [Epub ahead of print]


Misunderstanding the goals of animal research.

Rubin EJ, Fortune SM.

BMJ. 2018 Feb 21;360:k759. doi: 10.1136/bmj.k759. No abstract available.


TB diagnosis from the Dark Ages to fluorescence.

Rubin EJ.

Nat Microbiol. 2018 Mar;3(3):268-269. doi: 10.1038/s41564-018-0118-6. No abstract available.


Dissecting Cellulitis of the Scalp: A Rare Dermatological Manifestation of Crohn's Disease.

Syed TA, Ul Abideen Asad Z, Salem G, Garg K, Rubin E, Agudelo N.

ACG Case Rep J. 2018 Jan 31;5:e8. doi: 10.14309/crj.2018.8. eCollection 2018.


Identification of genes required for Mycobacterium abscessus growth in vivo with a prominent role of the ESX-4 locus.

Laencina L, Dubois V, Le Moigne V, Viljoen A, Majlessi L, Pritchard J, Bernut A, Piel L, Roux AL, Gaillard JL, Lombard B, Loew D, Rubin EJ, Brosch R, Kremer L, Herrmann JL, Girard-Misguich F.

Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):E1002-E1011. doi: 10.1073/pnas.1713195115. Epub 2018 Jan 17.


Characterization of Conserved and Novel Septal Factors in Mycobacterium smegmatis.

Wu KJ, Zhang J, Baranowski C, Leung V, Rego EH, Morita YS, Rubin EJ, Boutte CC.

J Bacteriol. 2018 Feb 23;200(6). pii: e00649-17. doi: 10.1128/JB.00649-17. Print 2018 Mar 15.


Tuberculosis: Just the FAQs.

Guinn KM, Rubin EJ.

MBio. 2017 Dec 19;8(6). pii: e01910-17. doi: 10.1128/mBio.01910-17. Review.


Towards the use of breath for detecting mycobacterial infection: a case study in a murine model.

Franchina FA, Mellors TR, Aliyeva M, Wagner J, Daphtary N, Lundblad LKA, Fortune SM, Rubin EJ, Hill JE.

J Breath Res. 2018 Feb 7;12(2):026008. doi: 10.1088/1752-7163/aaa016.


Report on the Third FDA-AACR Oncology Dose-Finding Workshop.

Emens LA, Bruno R, Rubin EH, Jaffee EM, McKee AE.

Cancer Immunol Res. 2017 Dec;5(12):1058-1061. doi: 10.1158/2326-6066.CIR-17-0590.


The surprising costs of silence: Asymmetric preferences for prosocial lies of commission and omission.

Levine E, Hart J, Moore K, Rubin E, Yadav K, Halpern S.

J Pers Soc Psychol. 2018 Jan;114(1):29-51. doi: 10.1037/pspa0000101. Epub 2017 Nov 2.


An Antibacterial β-Lactone Kills Mycobacterium tuberculosis by Disrupting Mycolic Acid Biosynthesis.

Lehmann J, Cheng TY, Aggarwal A, Park AS, Zeiler E, Raju RM, Akopian T, Kandror O, Sacchettini JC, Moody DB, Rubin EJ, Sieber SA.

Angew Chem Int Ed Engl. 2018 Jan 2;57(1):348-353. doi: 10.1002/anie.201709365. Epub 2017 Dec 5.


The future of DNA sequencing.

Green ED, Rubin EM, Olson MV.

Nature. 2017 Oct 11;550(7675):179-181. doi: 10.1038/550179a. No abstract available.


We Can Do Better - Improving Outcomes in the Midst of an Emergency.

Baden LR, Rubin EJ, Morrissey S, Farrar JJ, Drazen JM.

N Engl J Med. 2017 Oct 12;377(15):1482-1484. doi: 10.1056/NEJMe1712330. No abstract available.


Screen for Disordered Eating: Improving the accuracy of eating disorder screening in primary care.

Maguen S, Hebenstreit C, Li Y, Dinh JV, Donalson R, Dalton S, Rubin E, Masheb R.

Gen Hosp Psychiatry. 2018 Jan - Feb;50:20-25. doi: 10.1016/j.genhosppsych.2017.09.004. Epub 2017 Sep 27.


Broadening Eligibility Criteria to Make Clinical Trials More Representative: American Society of Clinical Oncology and Friends of Cancer Research Joint Research Statement.

Kim ES, Bruinooge SS, Roberts S, Ison G, Lin NU, Gore L, Uldrick TS, Lichtman SM, Roach N, Beaver JA, Sridhara R, Hesketh PJ, Denicoff AM, Garrett-Mayer E, Rubin E, Multani P, Prowell TM, Schenkel C, Kozak M, Allen J, Sigal E, Schilsky RL.

J Clin Oncol. 2017 Nov 20;35(33):3737-3744. doi: 10.1200/JCO.2017.73.7916. Epub 2017 Oct 2.


Modernizing Clinical Trial Eligibility: Recommendations of the American Society of Clinical Oncology-Friends of Cancer Research Minimum Age Working Group.

Gore L, Ivy SP, Balis FM, Rubin E, Thornton K, Donoghue M, Roberts S, Bruinooge S, Ersek J, Goodman N, Schenkel C, Reaman G.

J Clin Oncol. 2017 Nov 20;35(33):3781-3787. doi: 10.1200/JCO.2017.74.4144. Epub 2017 Oct 2.


Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J, Gregor I, Majda S, Fiedler J, Dahms E, Bremges A, Fritz A, Garrido-Oter R, Jørgensen TS, Shapiro N, Blood PD, Gurevich A, Bai Y, Turaev D, DeMaere MZ, Chikhi R, Nagarajan N, Quince C, Meyer F, Balvočiūtė M, Hansen LH, Sørensen SJ, Chia BKH, Denis B, Froula JL, Wang Z, Egan R, Don Kang D, Cook JJ, Deltel C, Beckstette M, Lemaitre C, Peterlongo P, Rizk G, Lavenier D, Wu YW, Singer SW, Jain C, Strous M, Klingenberg H, Meinicke P, Barton MD, Lingner T, Lin HH, Liao YC, Silva GGZ, Cuevas DA, Edwards RA, Saha S, Piro VC, Renard BY, Pop M, Klenk HP, Göker M, Kyrpides NC, Woyke T, Vorholt JA, Schulze-Lefert P, Rubin EM, Darling AE, Rattei T, McHardy AC.

Nat Methods. 2017 Nov;14(11):1063-1071. doi: 10.1038/nmeth.4458. Epub 2017 Oct 2.


A 2-in-1 adaptive phase 2/3 design for expedited oncology drug development.

Chen C, Anderson K, Mehrotra DV, Rubin EH, Tse A.

Contemp Clin Trials. 2018 Jan;64:238-242. doi: 10.1016/j.cct.2017.09.006. Epub 2017 Sep 28.


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