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Items: 34

1.

The circadian clock and darkness control natural competence in cyanobacteria.

Taton A, Erikson C, Yang Y, Rubin BE, Rifkin SA, Golden JW, Golden SS.

Nat Commun. 2020 Apr 3;11(1):1688. doi: 10.1038/s41467-020-15384-9.

PMID:
32245943
2.

The transcriptomic signature of low aggression in honey bees resembles a response to infection.

Rittschof CC, Rubin BER, Palmer JH.

BMC Genomics. 2019 Dec 30;20(1):1029. doi: 10.1186/s12864-019-6417-3.

3.

Rate variation in the evolution of non-coding DNA associated with social evolution in bees.

Rubin BER, Jones BM, Hunt BG, Kocher SD.

Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20180247. doi: 10.1098/rstb.2018.0247. Epub 2019 Jun 3.

PMID:
31154980
4.

A Hard Day's Night: Cyanobacteria in Diel Cycles.

Welkie DG, Rubin BE, Diamond S, Hood RD, Savage DF, Golden SS.

Trends Microbiol. 2019 Mar;27(3):231-242. doi: 10.1016/j.tim.2018.11.002. Epub 2018 Dec 5. Review.

5.

The genetic basis of a social polymorphism in halictid bees.

Kocher SD, Mallarino R, Rubin BER, Yu DW, Hoekstra HE, Pierce NE.

Nat Commun. 2018 Oct 18;9(1):4338. doi: 10.1038/s41467-018-06824-8.

6.

Social behaviour in bees influences the abundance of Sodalis (Enterobacteriaceae) symbionts.

Rubin BER, Sanders JG, Turner KM, Pierce NE, Kocher SD.

R Soc Open Sci. 2018 Jul 11;5(7):180369. doi: 10.1098/rsos.180369. eCollection 2018 Jul.

7.

Dietary specialization in mutualistic acacia-ants affects relative abundance but not identity of host-associated bacteria.

Rubin BER, Kautz S, Wray BD, Moreau CS.

Mol Ecol. 2019 Feb;28(4):900-916. doi: 10.1111/mec.14834. Epub 2018 Aug 31.

PMID:
30106217
8.

Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA.

Welkie DG, Rubin BE, Chang YG, Diamond S, Rifkin SA, LiWang A, Golden SS.

Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):E7174-E7183. doi: 10.1073/pnas.1802940115. Epub 2018 Jul 10.

9.

Mutant phenotypes for thousands of bacterial genes of unknown function.

Price MN, Wetmore KM, Waters RJ, Callaghan M, Ray J, Liu H, Kuehl JV, Melnyk RA, Lamson JS, Suh Y, Carlson HK, Esquivel Z, Sadeeshkumar H, Chakraborty R, Zane GM, Rubin BE, Wall JD, Visel A, Bristow J, Blow MJ, Arkin AP, Deutschbauer AM.

Nature. 2018 May;557(7706):503-509. doi: 10.1038/s41586-018-0124-0. Epub 2018 May 16.

10.

High-throughput interaction screens illuminate the role of c-di-AMP in cyanobacterial nighttime survival.

Rubin BE, Huynh TN, Welkie DG, Diamond S, Simkovsky R, Pierce EC, Taton A, Lowe LC, Lee JJ, Rifkin SA, Woodward JJ, Golden SS.

PLoS Genet. 2018 Apr 2;14(4):e1007301. doi: 10.1371/journal.pgen.1007301. eCollection 2018 Apr.

11.

Diversity and Persistence of the Gut Microbiome of the Giant Neotropical Bullet Ant.

Moreau CS, Rubin BER.

Integr Comp Biol. 2017 Oct 1;57(4):682-689. doi: 10.1093/icb/icx037.

PMID:
28655188
12.

Redox crisis underlies conditional light-dark lethality in cyanobacterial mutants that lack the circadian regulator, RpaA.

Diamond S, Rubin BE, Shultzaberger RK, Chen Y, Barber CD, Golden SS.

Proc Natl Acad Sci U S A. 2017 Jan 24;114(4):E580-E589. doi: 10.1073/pnas.1613078114. Epub 2017 Jan 10.

13.

Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis.

Broddrick JT, Rubin BE, Welkie DG, Du N, Mih N, Diamond S, Lee JJ, Golden SS, Palsson BO.

Proc Natl Acad Sci U S A. 2016 Dec 20;113(51):E8344-E8353. doi: 10.1073/pnas.1613446113. Epub 2016 Dec 1.

14.

Comparative genomics reveals convergent rates of evolution in ant-plant mutualisms.

Rubin BE, Moreau CS.

Nat Commun. 2016 Aug 25;7:12679. doi: 10.1038/ncomms12679.

15.

The essential gene set of a photosynthetic organism.

Rubin BE, Wetmore KM, Price MN, Diamond S, Shultzaberger RK, Lowe LC, Curtin G, Arkin AP, Deutschbauer A, Golden SS.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):E6634-43. doi: 10.1073/pnas.1519220112. Epub 2015 Oct 27.

16.

The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth.

Diamond S, Jun D, Rubin BE, Golden SS.

Proc Natl Acad Sci U S A. 2015 Apr 14;112(15):E1916-25. doi: 10.1073/pnas.1504576112. Epub 2015 Mar 30.

17.

Divergence across diet, time and populations rules out parallel evolution in the gut microbiomes of Trinidadian guppies.

Sullam KE, Rubin BE, Dalton CM, Kilham SS, Flecker AS, Russell JA.

ISME J. 2015 Jul;9(7):1508-22. doi: 10.1038/ismej.2014.231. Epub 2015 Jan 9.

18.

DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure.

Rubin BE, Sanders JG, Hampton-Marcell J, Owens SM, Gilbert JA, Moreau CS.

Microbiologyopen. 2014 Dec;3(6):910-21. doi: 10.1002/mbo3.216. Epub 2014 Sep 26.

19.

Investigating the impact of storage conditions on microbial community composition in soil samples.

Rubin BE, Gibbons SM, Kennedy S, Hampton-Marcell J, Owens S, Gilbert JA.

PLoS One. 2013 Jul 31;8(7):e70460. doi: 10.1371/journal.pone.0070460. Print 2013.

20.

Surveying the microbiome of ants: comparing 454 pyrosequencing with traditional methods to uncover bacterial diversity.

Kautz S, Rubin BE, Russell JA, Moreau CS.

Appl Environ Microbiol. 2013 Jan;79(2):525-34. doi: 10.1128/AEM.03107-12. Epub 2012 Nov 2.

21.

Inferring phylogenies from RAD sequence data.

Rubin BE, Ree RH, Moreau CS.

PLoS One. 2012;7(4):e33394. doi: 10.1371/journal.pone.0033394. Epub 2012 Apr 6.

22.

Isolation and characterization of microsatellite markers from the acacia-ant Crematogaster mimosae.

Rubin BE, Makarewich CA, Talaba AL, Stenzler L, Bogdanowicz SM, Lovette IJ.

Mol Ecol Resour. 2009 Jul;9(4):1212-4. doi: 10.1111/j.1755-0998.2009.02614.x. Epub 2009 Mar 4.

PMID:
21564879
23.

Computed tomography in the evaluation of renal lymphoma.

Rubin BE.

J Comput Assist Tomogr. 1979 Dec;3(6):759-64.

PMID:
512109
24.

Iatrogenic superior vena cava syndrome with spontaneous improvement.

Shirkhoda A, Rubin BE, Shahvari MB.

South Med J. 1979 Jul;72(7):876-8.

PMID:
451701
25.

Nonoperative management of intrahepatic hemorrhage and hematoma following blunt trauma.

Lambeth W, Rubin BE.

Surg Gynecol Obstet. 1979 Apr;148(4):507-11.

PMID:
432762
26.

Detection of inferior vena cava abnormalities by computed tomography.

Van Breda A, Rubin BE, Druy EM.

J Comput Assist Tomogr. 1979 Apr;3(2):164-9.

PMID:
219043
27.

Computed tomography in the evaluation of abdominal trauma.

Druy EM, Rubin BE.

J Comput Assist Tomogr. 1979 Feb;3(1):40-4.

PMID:
422790
28.

The striated nephrogram in renal contusion.

Rubin BE, Schliftman R.

Urol Radiol. 1979;1(2):119-21.

PMID:
553371
29.

Recurrent transitional cell carcinoma in an ileal conduit.

Rubin BE, Rodriguez E, Mangasarian R, Cummings J, Kwart A.

Urol Radiol. 1979;1(1):61-2.

PMID:
553366
30.

Low-dose heparin for prevention of venous thromboembolism in total hip arthroplasty and surgical repair of hip fractures.

Moskovitz PA, Ellenberg SS, Feffer HL, Kenmore PI, Neviaser RJ, Rubin BE, Varma VM.

J Bone Joint Surg Am. 1978 Dec;60(8):1065-70.

PMID:
363722
31.

Therapeutic embolization for postoperative hemorrhage about the hip of a patient with Pseudomonas infection.

Rubin BE, Fortune WP, May MM.

J Bone Joint Surg Am. 1978 Oct;60(7):988-91. No abstract available.

PMID:
359567
32.

Extravasation of ethiodol into deep tissues of the foot: a complication of lymphangiography.

Rubin BE.

AJR Am J Roentgenol. 1978 Aug;131(2):342-3. No abstract available.

PMID:
209682
33.

Selective hepatic artery embolization to control massive hepatic hemorrhage after trauma.

Rubin BE, Katzen BT.

AJR Am J Roentgenol. 1977 Aug;129(2):253-6.

PMID:
409159
34.

The nitroblue tetrazolium dye test.

Rubin BE, Tramont EC.

Med Ann Dist Columbia. 1972 Jul;41(7):422-6. No abstract available.

PMID:
4505635

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