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Items: 1 to 50 of 267

1.

Detection of Microsatellite Instability Biomarkers via Next-Generation Sequencing.

Bonneville R, Krook MA, Chen HZ, Smith A, Samorodnitsky E, Wing MR, Reeser JW, Roychowdhury S.

Methods Mol Biol. 2020;2055:119-132. doi: 10.1007/978-1-4939-9773-2_5.

PMID:
31502149
2.

Tumor heterogeneity and acquired drug resistance in FGFR2-fusion-positive cholangiocarcinoma through rapid research autopsy.

Krook MA, Bonneville R, Chen HZ, Reeser JW, Wing MR, Martin DM, Smith AM, Dao T, Samorodnitsky E, Paruchuri A, Miya J, Baker KR, Yu L, Timmers C, Dittmar K, Freud AG, Allenby P, Roychowdhury S.

Cold Spring Harb Mol Case Stud. 2019 Aug 1;5(4). pii: a004002. doi: 10.1101/mcs.a004002. Print 2019 Aug.

3.

Homologous recombination and DNA repair mutations in patients treated with carboplatin and nab-paclitaxel for metastatic non-small cell lung cancer.

Owen DH, Williams TM, Bertino EM, Mo X, Webb A, Schweitzer C, Liu T, Roychowdhury S, Timmers CD, Otterson GA.

Lung Cancer. 2019 Aug;134:167-173. doi: 10.1016/j.lungcan.2019.06.017. Epub 2019 Jun 17.

PMID:
31319977
4.

Metabolomic signatures of asthma-COPD overlap (ACO) are different from asthma and COPD.

Ghosh N, Choudhury P, Subramani E, Saha D, Sengupta S, Joshi M, Banerjee R, Roychowdhury S, Bhattacharyya P, Chaudhury K.

Metabolomics. 2019 Jun 4;15(6):87. doi: 10.1007/s11306-019-1552-z.

PMID:
31165288
5.

Sequential Interventional Management of Osseous Neoplasms via Embolization, Cryoablation, and Osteoplasty.

Sundararajan SH, Calamita S, Girgis P, Ngo G, Ranganathan S, Giglio M, Gendel V, Goyal S, Nosher J, Roychowdhury S.

J Oncol. 2019 Apr 14;2019:5247837. doi: 10.1155/2019/5247837. eCollection 2019.

6.

Novel T9 loop conformation of filamenting temperature-sensitive mutant Z from Mycobacterium tuberculosis.

Lazo EO, Jakoncic J, RoyChowdhury S, Awasthi D, Ojima I.

Acta Crystallogr F Struct Biol Commun. 2019 May 1;75(Pt 5):359-367. doi: 10.1107/S2053230X19004618. Epub 2019 Apr 24.

PMID:
31045565
7.

Characterization of a KLK2-FGFR2 fusion gene in two cases of metastatic prostate cancer.

Krook MA, Barker H, Chen HZ, Reeser JW, Wing MR, Martin D, Smith AM, Dao T, Bonneville R, Samorodnitsky E, Miya J, Freud AG, Monk JP, Clinton SK, Roychowdhury S.

Prostate Cancer Prostatic Dis. 2019 May 1. doi: 10.1038/s41391-019-0145-2. [Epub ahead of print]

PMID:
31043681
8.

Television Tip Over: An Avoidable Cause of Head Injury in Children.

Patel SM, Thamatapu E, Roychowdhury S, Krishnan P.

J Pediatr Neurosci. 2018 Oct-Dec;13(4):521-522. doi: 10.4103/JPN.JPN_87_18. No abstract available.

9.

Neurosurgical and Scalp Reconstructive Challenges During Craniotomy in the Setting of Cutis Verticis Gyrata.

Rallo MS, Nosko M, Agag RL, Xiong Z, Al-Mufti F, Roychowdhury S, Nanda A, Gupta G.

World Neurosurg. 2019 May;125:392-397. doi: 10.1016/j.wneu.2019.01.217. Epub 2019 Feb 11.

PMID:
30763753
10.

Microsatellite Instability Occurs in a Subset of Follicular Thyroid Cancers.

Genutis LK, Tomsic J, Bundschuh RA, Brock PL, Williams MD, Roychowdhury S, Reeser JW, Frankel WL, Alsomali M, Routbort MJ, Broaddus RR, Wakely PE Jr, Phay JE, Walker CJ, de la Chapelle A.

Thyroid. 2019 Apr;29(4):523-529. doi: 10.1089/thy.2018.0655. Epub 2019 Mar 27.

PMID:
30747051
11.

Genomic characterization of metastatic ultra-hypermutated interdigitating dendritic cell sarcoma through rapid research autopsy.

Chen HZ, Bonneville R, Yu L, Wing MR, Reeser JW, Krook MA, Miya J, Samorodnitsky E, Smith A, Martin D, Dao T, Guo Q, Liebner D, Freud AG, Allenby P, Roychowdhury S.

Oncotarget. 2019 Jan 8;10(3):277-288. doi: 10.18632/oncotarget.26352. eCollection 2019 Jan 8.

12.

A Designer Synbiotic Attenuates Chronic-Binge Ethanol-Induced Gut-Liver Injury in Mice.

Roychowdhury S, Glueck B, Han Y, Mohammad MA, Cresci GAM.

Nutrients. 2019 Jan 5;11(1). pii: E97. doi: 10.3390/nu11010097.

13.

Rapid Research Autopsy: Piecing the Puzzle of Tumor Heterogeneity.

Krook MA, Chen HZ, Bonneville R, Allenby P, Roychowdhury S.

Trends Cancer. 2019 Jan;5(1):1-5. doi: 10.1016/j.trecan.2018.11.004. Epub 2018 Dec 17.

PMID:
30616752
14.

History of Hemostasis in Neurosurgery.

Paulo D, Semonche A, Choudhry O, Al-Mufti F, Prestigiacomo CJ, Roychowdhury S, Nanda A, Gupta G.

World Neurosurg. 2018 Dec 19. pii: S1878-8750(18)32837-7. doi: 10.1016/j.wneu.2018.12.015. [Epub ahead of print] Review.

PMID:
30579020
15.

CATARACTS: Challenge on automatic tool annotation for cataRACT surgery.

Al Hajj H, Lamard M, Conze PH, Roychowdhury S, Hu X, Maršalkaitė G, Zisimopoulos O, Dedmari MA, Zhao F, Prellberg J, Sahu M, Galdran A, Araújo T, Vo DM, Panda C, Dahiya N, Kondo S, Bian Z, Vahdat A, Bialopetravičius J, Flouty E, Qiu C, Dill S, Mukhopadhyay A, Costa P, Aresta G, Ramamurthy S, Lee SW, Campilho A, Zachow S, Xia S, Conjeti S, Stoyanov D, Armaitis J, Heng PA, Macready WG, Cochener B, Quellec G.

Med Image Anal. 2019 Feb;52:24-41. doi: 10.1016/j.media.2018.11.008. Epub 2018 Nov 16.

PMID:
30468970
16.

Arachidonic Acid Induces the Migration of MDA-MB-231 Cells by Activating Raft-associated Leukotriene B4 Receptors.

Chatterjee A, Roy D, Guevara P, Pal R, Naryan M, Roychowdhury S, Das S.

Clin Cancer Drugs. 2018;5(1):28-41. doi: 10.2174/2212697X05666180418145601.

17.

Vps74p controls Golgi size in an Arf1-dependent manner.

Iyer P, Bhave M, Jain BK, RoyChowdhury S, Bhattacharyya D.

FEBS Lett. 2018 Nov;592(22):3720-3735. doi: 10.1002/1873-3468.13266. Epub 2018 Oct 24.

PMID:
30291722
18.

Updates in the Management of Cerebral Infarctions and Subarachnoid Hemorrhage Secondary to Intracranial Arterial Dissection: A Systematic Review.

Al-Mufti F, Kamal N, Damodara N, Nuoman R, Gupta R, Alotaibi NM, Alkanaq A, El-Ghanem M, Keller IA, Schonfeld S, Gupta G, Roychowdhury S.

World Neurosurg. 2019 Jan;121:51-58. doi: 10.1016/j.wneu.2018.09.153. Epub 2018 Sep 27.

PMID:
30268550
19.

Isolated Abducens Nerve Palsy Associated with Ruptured Posterior Inferior Cerebellar Artery Aneurysm: Rare Neurologic Finding.

Parr M, Carminucci A, Al-Mufti F, Roychowdhury S, Gupta G.

World Neurosurg. 2019 Jan;121:97-99. doi: 10.1016/j.wneu.2018.09.096. Epub 2018 Sep 26.

PMID:
30266698
20.

Stabilizing n-Type Cubic GeSe by Entropy-Driven Alloying of AgBiSe2 : Ultralow Thermal Conductivity and Promising Thermoelectric Performance.

Roychowdhury S, Ghosh T, Arora R, Waghmare UV, Biswas K.

Angew Chem Int Ed Engl. 2018 Nov 12;57(46):15167-15171. doi: 10.1002/anie.201809841. Epub 2018 Oct 15.

PMID:
30225858
21.

Chemical angioplasty for medically refractory reversible cerebral vasoconstriction syndrome.

Al-Mufti F, Dodson V, Wajswol E, El-Ghanem M, Alchaki A, Nuoman R, Thabet A, Sutherland A, Roychowdhury S, Hidalgo A, Gupta G.

Br J Neurosurg. 2018 Aug;32(4):431-435. doi: 10.1080/02688697.2018.1479512. Epub 2018 Sep 12.

PMID:
30207193
22.

Targeting BRAF Mutations in High-Grade Neuroendocrine Carcinoma of the Colon.

Burkart J, Owen D, Shah MH, Abdel-Misih SRZ, Roychowdhury S, Wesolowski R, Haraldsdottir S, Reeser JW, Samorodnitsky E, Smith A, Konda B.

J Natl Compr Canc Netw. 2018 Sep;16(9):1035-1040. doi: 10.6004/jnccn.2018.7043.

PMID:
30181415
23.

The Role of the Gut Microbiome in Nonalcoholic Fatty Liver Disease.

Roychowdhury S, Selvakumar PC, Cresci GAM.

Med Sci (Basel). 2018 Jun 5;6(2). pii: E47. doi: 10.3390/medsci6020047. Review.

24.

Implementing precision cancer medicine in the genomic era.

Chen HZ, Bonneville R, Roychowdhury S.

Semin Cancer Biol. 2019 Apr;55:16-27. doi: 10.1016/j.semcancer.2018.05.009. Epub 2018 May 30. Review.

PMID:
29857039
25.

Activation of β- and α2-adrenergic receptors stimulate tubulin polymerization and promote the association of Gβγ with microtubules in cultured NIH3T3 cells.

Sierra-Fonseca JA, Bracamontes C, Saldecke J, Das S, Roychowdhury S.

Biochem Biophys Res Commun. 2018 Sep 3;503(1):102-108. doi: 10.1016/j.bbrc.2018.05.188. Epub 2018 Jun 6.

26.

Giant Left Atrial Appendage Aneurysm: A Rare Entity.

Das R, Kapoor L, Ganguly S, Maity A, RoyChowdhury S, Narayan P.

Ann Thorac Surg. 2018 Dec;106(6):e323-e324. doi: 10.1016/j.athoracsur.2018.04.018. Epub 2018 May 9. No abstract available.

PMID:
29752916
27.

The journey of tin chalcogenides towards high-performance thermoelectrics and topological materials.

Banik A, Roychowdhury S, Biswas K.

Chem Commun (Camb). 2018 Jun 19;54(50):6573-6590. doi: 10.1039/c8cc02230e.

PMID:
29749410
28.

Interventional Removal of Traumatic Nail from Skull Base After Endovascular Coiling of Internal Carotid Artery and Jugular Vein.

Dow R, Shah K, Gupta G, Censullo M, Roychowdhury S.

World Neurosurg. 2018 Jul;115:138-142. doi: 10.1016/j.wneu.2018.04.083. Epub 2018 Apr 22.

PMID:
29689400
29.

Myocardial protection following del Nido cardioplegia in pediatric cardiac surgery.

Panigrahi D, Roychowdhury S, Guhabiswas R, Rupert E, Das M, Narayan P.

Asian Cardiovasc Thorac Ann. 2018 May;26(4):267-272. doi: 10.1177/0218492318773589. Epub 2018 Apr 18.

PMID:
29667902
30.

Complement Factor D protects mice from ethanol-induced inflammation and liver injury.

McCullough RL, McMullen MR, Sheehan MM, Poulsen KL, Roychowdhury S, Chiang DJ, Pritchard MT, Caballeria J, Nagy LE.

Am J Physiol Gastrointest Liver Physiol. 2018 Jul 1;315(1):G66-G79. doi: 10.1152/ajpgi.00334.2017. Epub 2018 Mar 29.

31.

Soft Phonon Modes Leading to Ultralow Thermal Conductivity and High Thermoelectric Performance in AgCuTe.

Roychowdhury S, Jana MK, Pan J, Guin SN, Sanyal D, Waghmare UV, Biswas K.

Angew Chem Int Ed Engl. 2018 Apr 3;57(15):4043-4047. doi: 10.1002/anie.201801491. Epub 2018 Mar 12.

PMID:
29488301
32.

Metaplastic breast cancer in a patient with neurofibromatosis type 1 and somatic loss of heterozygosity.

Suarez-Kelly LP, Akagi K, Reeser JW, Samorodnitsky E, Reeder M, Smith A, Roychowdhury S, Symer DE, Carson WE.

Cold Spring Harb Mol Case Stud. 2018 Apr 2;4(2). pii: a002352. doi: 10.1101/mcs.a002352. Print 2018 Apr. Review.

33.

Hydroponic Treatment of Nicotiana benthamiana with Kifunensine Modifies the N-glycans of Recombinant Glycoprotein Antigens to Predominantly Man9 High-Mannose Type upon Transient Overexpression.

Roychowdhury S, Oh YJ, Kajiura H, Hamorsky KT, Fujiyama K, Matoba N.

Front Plant Sci. 2018 Jan 30;9:62. doi: 10.3389/fpls.2018.00062. eCollection 2018.

34.

Faecalibacterium prausnitzii and a Prebiotic Protect Intestinal Health in a Mouse Model of Antibiotic and Clostridium difficile Exposure.

Roychowdhury S, Cadnum J, Glueck B, Obrenovich M, Donskey C, Cresci GAM.

JPEN J Parenter Enteral Nutr. 2018 Sep;42(7):1156-1167. doi: 10.1002/jpen.1053. Epub 2018 Jan 31.

35.

A benchmark study of automated intra-retinal cyst segmentation algorithms using optical coherence tomography B-scans.

Girish GN, Anima VA, Kothari AR, Sudeep PV, Roychowdhury S, Rajan J.

Comput Methods Programs Biomed. 2018 Jan;153:105-114. doi: 10.1016/j.cmpb.2017.10.010. Epub 2017 Oct 12.

PMID:
29157443
36.

Hyaluronic acid 35 normalizes TLR4 signaling in Kupffer cells from ethanol-fed rats via regulation of microRNA291b and its target Tollip.

Saikia P, Roychowdhury S, Bellos D, Pollard KA, McMullen MR, McCullough RL, McCullough AJ, Gholam P, de la Motte C, Nagy LE.

Sci Rep. 2017 Nov 15;7(1):15671. doi: 10.1038/s41598-017-15760-4.

37.

Analytic validation and real-time clinical application of an amplicon-based targeted gene panel for advanced cancer.

Wing MR, Reeser JW, Smith AM, Reeder M, Martin D, Jewell BM, Datta J, Miya J, Monk JP, Mortazavi A, Otterson GA, Goldberg RM, VanDeusen JB, Cole S, Dittmar K, Jaiswal S, Kinzie M, Waikhom S, Freud AG, Zhou XP, Chen W, Bhatt D, Roychowdhury S.

Oncotarget. 2017 Sep 1;8(44):75822-75833. doi: 10.18632/oncotarget.20616. eCollection 2017 Sep 29.

38.

Trametinib for the treatment of IGHV4-34, MAP2K1-mutant variant hairy cell leukemia.

Andritsos LA, Grieselhuber NR, Anghelina M, Rogers KA, Roychowdhury S, Reeser JW, Timmers CD, Freud AG, Blachly JS, Lucas DM, Lozanski G, Jones JA, Williams K, Oakes C, Jones D, Grever MR.

Leuk Lymphoma. 2018 Apr;59(4):1008-1011. doi: 10.1080/10428194.2017.1365853. Epub 2017 Sep 18. No abstract available.

PMID:
28918710
39.

Pathway-based expression profiling of benign prostatic hyperplasia and prostate cancer delineates an immunophilin molecule associated with cancer progression.

Bhowal A, Majumder S, Ghosh S, Basu S, Sen D, Roychowdhury S, Sengupta S, Chatterji U.

Sci Rep. 2017 Aug 29;7(1):9763. doi: 10.1038/s41598-017-10068-9.

40.

Validation of a Targeted RNA Sequencing Assay for Kinase Fusion Detection in Solid Tumors.

Reeser JW, Martin D, Miya J, Kautto EA, Lyon E, Zhu E, Wing MR, Smith A, Reeder M, Samorodnitsky E, Parks H, Naik KR, Gozgit J, Nowacki N, Davies KD, Varella-Garcia M, Yu L, Freud AG, Coleman J, Aisner DL, Roychowdhury S.

J Mol Diagn. 2017 Sep;19(5):682-696. doi: 10.1016/j.jmoldx.2017.05.006. Epub 2017 Aug 9.

41.

Cerebrolysin prevents deficits in social behavior, repetitive conduct, and synaptic inhibition in a rat model of autism.

Cuevas-Olguin R, Roychowdhury S, Banerjee A, Garcia-Oscos F, Esquivel-Rendon E, Bringas ME, Kilgard MP, Flores G, Atzori M.

J Neurosci Res. 2017 Dec;95(12):2456-2468. doi: 10.1002/jnr.24072. Epub 2017 Jun 13.

PMID:
28609577
42.

Ultrahigh Average Thermoelectric Figure of Merit, Low Lattice Thermal Conductivity and Enhanced Microhardness in Nanostructured (GeTe)x (AgSbSe2 )100-x.

Samanta M, Roychowdhury S, Ghatak J, Perumal S, Biswas K.

Chemistry. 2017 Jun 1;23(31):7438-7443. doi: 10.1002/chem.201701480. Epub 2017 May 15.

PMID:
28436062
43.

Classification of large-scale fundus image data sets: a cloud-computing framework.

Roychowdhury S.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:3256-3259. doi: 10.1109/EMBC.2016.7591423.

PMID:
28269002
44.

Artery/vein classification of retinal blood vessels using feature selection.

Vijayakumar V, Koozekanani DD, White R, Kohler J, Roychowdhury S, Parhi KK.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1320-1323. doi: 10.1109/EMBC.2016.7590950.

PMID:
28268568
45.

Automated detection of neovascularization for proliferative diabetic retinopathy screening.

Roychowdhury S, Koozekanani DD, Parhi KK.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:1300-1303. doi: 10.1109/EMBC.2016.7590945.

PMID:
28268564
46.

Akt Activation Mediates Acquired Resistance to Fibroblast Growth Factor Receptor Inhibitor BGJ398.

Datta J, Damodaran S, Parks H, Ocrainiciuc C, Miya J, Yu L, Gardner EP, Samorodnitsky E, Wing MR, Bhatt D, Hays J, Reeser JW, Roychowdhury S.

Mol Cancer Ther. 2017 Apr;16(4):614-624. doi: 10.1158/1535-7163.MCT-15-1010. Epub 2017 Mar 2.

47.

Vein of Galen malformation in a neonate: A case report and review of endovascular management.

Puvabanditsin S, Mehta R, Palomares K, Gengel N, Da Silva CF, Roychowdhury S, Gupta G, Kashyap A, Sorrentino D.

World J Clin Pediatr. 2017 Feb 8;6(1):103-109. doi: 10.5409/wjcp.v6.i1.103. eCollection 2017 Feb 8.

48.

Myeloid-MyD88 Contributes to Ethanol-Induced Liver Injury in Mice Linking Hepatocellular Death to Inflammation.

Zhou H, Yu M, Roychowdhury S, Sanz-Garcia C, Pollard KA, McMullen MR, Liu X, Li X, Nagy LE.

Alcohol Clin Exp Res. 2017 Apr;41(4):719-726. doi: 10.1111/acer.13345. Epub 2017 Mar 10.

49.

Operative bed recurrence of thyroid cancer: utility of a preoperative needle localization technique.

Eng OS, Grant SB, Weissler J, Simon M, Roychowdhury S, Davidov T, Trooskin SZ.

Gland Surg. 2016 Dec;5(6):571-575. doi: 10.21037/gs.2016.12.12.

50.

Limited Excessive Voluntary Alcohol Drinking Leads to Liver Dysfunction in Mice.

Wegner SA, Pollard KA, Kharazia V, Darevsky D, Perez L, Roychowdhury S, Xu A, Ron D, Nagy LE, Hopf FW.

Alcohol Clin Exp Res. 2017 Feb;41(2):345-358. doi: 10.1111/acer.13303. Epub 2017 Jan 19.

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