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Items: 49

1.

The m6A pathway protects the transcriptome integrity by restricting RNA chimera formation in plants.

Pontier D, Picart C, El Baidouri M, Roudier F, Xu T, Lahmy S, Llauro C, Azevedo J, Laudié M, Attina A, Hirtz C, Carpentier MC, Shen L, Lagrange T.

Life Sci Alliance. 2019 May 29;2(3). pii: e201900393. doi: 10.26508/lsa.201900393. Print 2019 Jun.

2.

Genome-wide identification of RETINOBLASTOMA RELATED 1 binding sites in Arabidopsis reveals novel DNA damage regulators.

Bouyer D, Heese M, Chen P, Harashima H, Roudier F, Grüttner C, Schnittger A.

PLoS Genet. 2018 Nov 30;14(11):e1007797. doi: 10.1371/journal.pgen.1007797. eCollection 2018 Nov.

3.

Polycomb Repressive Complex 2 attenuates the very high expression of the Arabidopsis gene NRT2.1.

Bellegarde F, Herbert L, Séré D, Caillieux E, Boucherez J, Fizames C, Roudier F, Gojon A, Martin A.

Sci Rep. 2018 May 21;8(1):7905. doi: 10.1038/s41598-018-26349-w.

4.

Chromatin Immunoprecipitation Sequencing (ChIP-Seq) for Transcription Factors and Chromatin Factors in Arabidopsis thaliana Roots: From Material Collection to Data Analysis.

Cortijo S, Charoensawan V, Roudier F, Wigge PA.

Methods Mol Biol. 2018;1761:231-248. doi: 10.1007/978-1-4939-7747-5_18.

PMID:
29525962
5.

Comparative epigenomics in the Brassicaceae reveals two evolutionarily conserved modes of PRC2-mediated gene regulation.

Chica C, Louis A, Roest Crollius H, Colot V, Roudier F.

Genome Biol. 2017 Oct 31;18(1):207. doi: 10.1186/s13059-017-1333-9.

6.

Cell Type-Specific Profiling of Chromatin Modifications and Associated Proteins.

Morao AK, Caillieux E, Colot V, Roudier F.

Methods Mol Biol. 2018;1675:111-130. doi: 10.1007/978-1-4939-7318-7_8.

PMID:
29052189
7.

DNA methylation dynamics during early plant life.

Bouyer D, Kramdi A, Kassam M, Heese M, Schnittger A, Roudier F, Colot V.

Genome Biol. 2017 Sep 25;18(1):179. doi: 10.1186/s13059-017-1313-0.

8.

Epigenetic memory and cell fate reprogramming in plants.

Birnbaum KD, Roudier F.

Regeneration (Oxf). 2017 Feb 1;4(1):15-20. doi: 10.1002/reg2.73. eCollection 2017 Feb. Review.

9.

Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development.

Rosspopoff O, Chelysheva L, Saffar J, Lecorgne L, Gey D, Caillieux E, Colot V, Roudier F, Hilson P, Berthomé R, Da Costa M, Rech P.

Development. 2017 Apr 1;144(7):1187-1200. doi: 10.1242/dev.142570. Epub 2017 Feb 7.

10.

Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation.

de Lucas M, Pu L, Turco G, Gaudinier A, Morao AK, Harashima H, Kim D, Ron M, Sugimoto K, Roudier F, Brady SM.

Plant Cell. 2016 Oct;28(10):2616-2631. Epub 2016 Sep 20.

11.

Emerging concepts in chromatin-level regulation of plant cell differentiation: timing, counting, sensing and maintaining.

Morao AK, Bouyer D, Roudier F.

Curr Opin Plant Biol. 2016 Dec;34:27-34. doi: 10.1016/j.pbi.2016.07.010. Epub 2016 Aug 11. Review.

PMID:
27522467
12.

A versatile Multisite Gateway-compatible promoter and transgenic line collection for cell type-specific functional genomics in Arabidopsis.

Marquès-Bueno MDM, Morao AK, Cayrel A, Platre MP, Barberon M, Caillieux E, Colot V, Jaillais Y, Roudier F, Vert G.

Plant J. 2016 Jan;85(2):320-333. doi: 10.1111/tpj.13099.

13.

PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.

Ikeuchi M, Iwase A, Rymen B, Harashima H, Shibata M, Ohnuma M, Breuer C, Morao AK, de Lucas M, De Veylder L, Goodrich J, Brady SM, Roudier F, Sugimoto K.

Nat Plants. 2015 Jun 29;1:15089. doi: 10.1038/nplants.2015.89.

PMID:
27250255
14.

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.

Willing EM, Rawat V, Mandáková T, Maumus F, James GV, Nordström KJ, Becker C, Warthmann N, Chica C, Szarzynska B, Zytnicki M, Albani MC, Kiefer C, Bergonzi S, Castaings L, Mateos JL, Berns MC, Bujdoso N, Piofczyk T, de Lorenzo L, Barrero-Sicilia C, Mateos I, Piednoël M, Hagmann J, Chen-Min-Tao R, Iglesias-Fernández R, Schuster SC, Alonso-Blanco C, Roudier F, Carbonero P, Paz-Ares J, Davis SJ, Pecinka A, Quesneville H, Colot V, Lysak MA, Weigel D, Coupland G, Schneeberger K.

Nat Plants. 2015 Feb 2;1:14023. doi: 10.1038/nplants.2014.23.

PMID:
27246759
15.

The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development.

Chardin C, Girin T, Roudier F, Meyer C, Krapp A.

J Exp Bot. 2014 Oct;65(19):5577-87. doi: 10.1093/jxb/eru261. Epub 2014 Jul 1. Review.

PMID:
24987011
16.

Mapping the epigenetic basis of complex traits.

Cortijo S, Wardenaar R, Colomé-Tatché M, Gilly A, Etcheverry M, Labadie K, Caillieux E, Hospital F, Aury JM, Wincker P, Roudier F, Jansen RC, Colot V, Johannes F.

Science. 2014 Mar 7;343(6175):1145-8. doi: 10.1126/science.1248127. Epub 2014 Feb 6.

PMID:
24505129
17.

Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants.

Marchive C, Roudier F, Castaings L, Bréhaut V, Blondet E, Colot V, Meyer C, Krapp A.

Nat Commun. 2013;4:1713. doi: 10.1038/ncomms2650.

PMID:
23591880
18.

Epigenetics and development in plants: green light to convergent innovations.

Grimanelli D, Roudier F.

Curr Top Dev Biol. 2013;104:189-222. doi: 10.1016/B978-0-12-416027-9.00006-1. Review.

PMID:
23587242
19.

MeDIP-HMM: genome-wide identification of distinct DNA methylation states from high-density tiling arrays.

Seifert M, Cortijo S, Colomé-Tatché M, Johannes F, Roudier F, Colot V.

Bioinformatics. 2012 Nov 15;28(22):2930-9. doi: 10.1093/bioinformatics/bts562. Epub 2012 Sep 17.

PMID:
22989518
20.

NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.

Pontier D, Picart C, Roudier F, Garcia D, Lahmy S, Azevedo J, Alart E, Laudié M, Karlowski WM, Cooke R, Colot V, Voinnet O, Lagrange T.

Mol Cell. 2012 Oct 12;48(1):121-32. doi: 10.1016/j.molcel.2012.07.027. Epub 2012 Aug 30.

21.

Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis.

Bourbousse C, Ahmed I, Roudier F, Zabulon G, Blondet E, Balzergue S, Colot V, Bowler C, Barneche F.

PLoS Genet. 2012;8(7):e1002825. doi: 10.1371/journal.pgen.1002825. Epub 2012 Jul 19.

22.

Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27.

Berger N, Dubreucq B, Roudier F, Dubos C, Lepiniec L.

Plant Cell. 2011 Nov;23(11):4065-78. doi: 10.1105/tpc.111.087866. Epub 2011 Nov 11.

23.

Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids.

Moghaddam AM, Roudier F, Seifert M, Bérard C, Magniette ML, Ashtiyani RK, Houben A, Colot V, Mette MF.

Plant J. 2011 Aug;67(4):691-700. doi: 10.1111/j.1365-313X.2011.04628.x. Epub 2011 Jul 11.

24.

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis.

Roudier F, Ahmed I, Bérard C, Sarazin A, Mary-Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois-Berthet E, Al-Shikhley L, Giraut L, Després B, Drevensek S, Barneche F, Dèrozier S, Brunaud V, Aubourg S, Schnittger A, Bowler C, Martin-Magniette ML, Robin S, Caboche M, Colot V.

EMBO J. 2011 May 18;30(10):1928-38. doi: 10.1038/emboj.2011.103. Epub 2011 Apr 12.

25.

Polycomb repressive complex 2 controls the embryo-to-seedling phase transition.

Bouyer D, Roudier F, Heese M, Andersen ED, Gey D, Nowack MK, Goodrich J, Renou JP, Grini PE, Colot V, Schnittger A.

PLoS Genet. 2011 Mar;7(3):e1002014. doi: 10.1371/journal.pgen.1002014. Epub 2011 Mar 10.

26.

Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis.

Roudier F, Gissot L, Beaudoin F, Haslam R, Michaelson L, Marion J, Molino D, Lima A, Bach L, Morin H, Tellier F, Palauqui JC, Bellec Y, Renne C, Miquel M, Dacosta M, Vignard J, Rochat C, Markham JE, Moreau P, Napier J, Faure JD.

Plant Cell. 2010 Feb;22(2):364-75. doi: 10.1105/tpc.109.071209. Epub 2010 Feb 9.

27.

Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more.

Roudier F, Teixeira FK, Colot V.

Trends Genet. 2009 Nov;25(11):511-7. doi: 10.1016/j.tig.2009.09.013. Epub 2009 Oct 21. Review. Erratum in: Trends Genet. 2010 Mar;26(3):102.

PMID:
19850370
28.

A role for RNAi in the selective correction of DNA methylation defects.

Teixeira FK, Heredia F, Sarazin A, Roudier F, Boccara M, Ciaudo C, Cruaud C, Poulain J, Berdasco M, Fraga MF, Voinnet O, Wincker P, Esteller M, Colot V.

Science. 2009 Mar 20;323(5921):1600-4. doi: 10.1126/science.1165313. Epub 2009 Jan 29.

29.

Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.

Turck F, Roudier F, Farrona S, Martin-Magniette ML, Guillaume E, Buisine N, Gagnot S, Martienssen RA, Coupland G, Colot V.

PLoS Genet. 2007 Jun;3(6):e86. Epub 2007 Apr 17.

30.

The C terminus of the immunophilin PASTICCINO1 is required for plant development and for interaction with a NAC-like transcription factor.

Smyczynski C, Roudier F, Gissot L, Vaillant E, Grandjean O, Morin H, Masson T, Bellec Y, Geelen D, Faure JD.

J Biol Chem. 2006 Sep 1;281(35):25475-84. Epub 2006 Jun 27.

31.

COBRA, an Arabidopsis extracellular glycosyl-phosphatidyl inositol-anchored protein, specifically controls highly anisotropic expansion through its involvement in cellulose microfibril orientation.

Roudier F, Fernandez AG, Fujita M, Himmelspach R, Borner GH, Schindelman G, Song S, Baskin TI, Dupree P, Wasteneys GO, Benfey PN.

Plant Cell. 2005 Jun;17(6):1749-63. Epub 2005 Apr 22.

32.

Endoreduplication mediated by the anaphase-promoting complex activator CCS52A is required for symbiotic cell differentiation in Medicago truncatula nodules.

Vinardell JM, Fedorova E, Cebolla A, Kevei Z, Horvath G, Kelemen Z, Tarayre S, Roudier F, Mergaert P, Kondorosi A, Kondorosi E.

Plant Cell. 2003 Sep;15(9):2093-105.

33.

The Medicago species A2-type cyclin is auxin regulated and involved in meristem formation but dispensable for endoreduplication-associated developmental programs.

Roudier F, Fedorova E, Lebris M, Lecomte P, Györgyey J, Vaubert D, Horvath G, Abad P, Kondorosi A, Kondorosi E.

Plant Physiol. 2003 Mar;131(3):1091-103.

34.

The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion.

Roudier F, Schindelman G, DeSalle R, Benfey PN.

Plant Physiol. 2002 Oct;130(2):538-48.

35.

Plant cell-size control: growing by ploidy?

Kondorosi E, Roudier F, Gendreau E.

Curr Opin Plant Biol. 2000 Dec;3(6):488-92. Review.

PMID:
11074380
36.

Cell cycle function of a Medicago sativa A2-type cyclin interacting with a PSTAIRE-type cyclin-dependent kinase and a retinoblastoma protein.

Roudier F, Fedorova E, Györgyey J, Feher A, Brown S, Kondorosi A, Kondorosi E.

Plant J. 2000 Jul;23(1):73-83.

37.

The mitotic inhibitor ccs52 is required for endoreduplication and ploidy-dependent cell enlargement in plants.

Cebolla A, Vinardell JM, Kiss E, Oláh B, Roudier F, Kondorosi A, Kondorosi E.

EMBO J. 1999 Aug 16;18(16):4476-84.

38.

Vascularization of fetal cell suspension grafts in the excitotoxically lesioned adult rat thalamus.

Dusart I, Nothias F, Roudier F, Besson JM, Peschanski M.

Brain Res Dev Brain Res. 1989 Aug 1;48(2):215-28.

PMID:
2476260
39.

First month of development of fetal neurons transplanted as a cell suspension into the adult CNS.

Nothias F, Dusart I, Roudier F, Peschanski M.

Neuroscience. 1989;33(3):605-16.

PMID:
2636711
40.

Immunocytochemical study of serotoninergic and noradrenergic innervation of the ventrobasal complex of the rat thalamus.

Nothias F, Onteniente B, Roudier F, Peschanksi M.

Neurosci Lett. 1988 Dec 19;95(1-3):59-63.

PMID:
3226623
41.

[Possible role of the neuronal environment in the vascularization of an intracerebral graft].

Dusart I, Nothias F, Roudier F, Peschanski M.

C R Acad Sci III. 1987;305(7):277-83. French.

PMID:
3113688
42.

Propriospinal fibers reaching the lumbar enlargement in the rat.

Menétrey D, de Pommery J, Roudier F.

Neurosci Lett. 1985 Jul 31;58(2):257-61.

PMID:
3840241
44.

[Morphological changes of the terminations of afferent pathways in a neurodegenerative lesion induced by kainic acid].

Peschanski M, Poingt JP, Roudier F, Besson JM.

C R Acad Sci III. 1985;301(3):83-8. French.

PMID:
3930010
45.
46.

Postsynaptic fibers reaching the dorsal column nuclei in the rat.

de Pommery J, Roudier F, Menétrey D.

Neurosci Lett. 1984 Sep 7;50(1-3):319-23.

PMID:
6493635
47.
48.

Reticularis thalami afferents to the ventrobasal complex of the rat thalamus: an electron microscope study.

Peschanski M, Ralston HJ, Roudier F.

Brain Res. 1983 Jul 4;270(2):325-9.

PMID:
6883100
49.

[Accustoming of caged animals to the cage effect. Hypothalamo-hypophyseal repercussions].

Roudier R, Roussel A, Duverger A, Roudier F.

C R Seances Soc Biol Fil. 1970;164(1):68-71. French. No abstract available.

PMID:
4248046

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