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Items: 1 to 50 of 148

1.

Analog Retinal Redshifts Visible Absorption of QuasAr Transmembrane Voltage Sensors into Near-infrared.

Mei G, Mamaeva N, Ganapathy S, Wang P, DeGrip WJ, Rothschild KJ.

Photochem Photobiol. 2019 Sep 25. doi: 10.1111/php.13169. [Epub ahead of print]

PMID:
31556123
2.

Electronic Preresonance Stimulated Raman Scattering Imaging of Red-Shifted Proteorhodopsins: Toward Quantitation of the Membrane Potential.

Lee HJ, Huang KC, Mei G, Zong C, Mamaeva N, DeGrip WJ, Rothschild KJ, Cheng JX.

J Phys Chem Lett. 2019 Aug 1;10(15):4374-4381. doi: 10.1021/acs.jpclett.9b01337. Epub 2019 Jul 22.

PMID:
31313926
3.

Redshifted and Near-infrared Active Analog Pigments Based upon Archaerhodopsin-3.

Ganapathy S, Kratz S, Chen Q, Hellingwerf KJ, de Groot HJM, Rothschild KJ, de Grip WJ.

Photochem Photobiol. 2019 Jul;95(4):959-968. doi: 10.1111/php.13093. Epub 2019 Apr 8.

PMID:
30860604
4.

Raman spectroscopy of a near infrared absorbing proteorhodopsin: Similarities to the bacteriorhodopsin O photointermediate.

Mei G, Mamaeva N, Ganapathy S, Wang P, DeGrip WJ, Rothschild KJ.

PLoS One. 2018 Dec 26;13(12):e0209506. doi: 10.1371/journal.pone.0209506. eCollection 2018.

5.

Photocleavage-based affinity purification of biomarkers from serum: Application to multiplex allergy testing.

Wan Z, Ostendorff HP, Liu Z, Schneider LC, Rothschild KJ, Lim MJ.

PLoS One. 2018 Feb 1;13(2):e0191987. doi: 10.1371/journal.pone.0191987. eCollection 2018.

6.

Resolution extension by image summing in serial femtosecond crystallography of two-dimensional membrane-protein crystals.

Casadei CM, Tsai CJ, Barty A, Hunter MS, Zatsepin NA, Padeste C, Capitani G, Benner WH, Boutet S, Hau-Riege SP, Kupitz C, Messerschmidt M, Ogren JI, Pardini T, Rothschild KJ, Sala L, Segelke B, Williams GJ, Evans JE, Li XD, Coleman M, Pedrini B, Frank M.

IUCrJ. 2018 Jan 1;5(Pt 1):103-117. doi: 10.1107/S2052252517017043. eCollection 2018 Jan 1.

7.

Structural Changes in an Anion Channelrhodopsin: Formation of the K and L Intermediates at 80 K.

Yi A, Li H, Mamaeva N, Fernandez De Cordoba RE, Lugtenburg J, DeGrip WJ, Spudich JL, Rothschild KJ.

Biochemistry. 2017 Apr 25;56(16):2197-2208. doi: 10.1021/acs.biochem.7b00002. Epub 2017 Apr 10.

8.

Proteome-wide drug screening using mass spectrometric imaging of bead-arrays.

Zhou Y, Liu Z, Rothschild KJ, Lim MJ.

Sci Rep. 2016 May 19;6:26125. doi: 10.1038/srep26125.

9.

Resonance Raman Study of an Anion Channelrhodopsin: Effects of Mutations near the Retinylidene Schiff Base.

Yi A, Mamaeva N, Li H, Spudich JL, Rothschild KJ.

Biochemistry. 2016 Apr 26;55(16):2371-80. doi: 10.1021/acs.biochem.6b00104. Epub 2016 Apr 14.

10.

Proton transfers in a channelrhodopsin-1 studied by Fourier transform infrared (FTIR) difference spectroscopy and site-directed mutagenesis.

Ogren JI, Yi A, Mamaev S, Li H, Spudich JL, Rothschild KJ.

J Biol Chem. 2015 May 15;290(20):12719-30. doi: 10.1074/jbc.M114.634840. Epub 2015 Mar 23.

11.

Comparison of the structural changes occurring during the primary phototransition of two different channelrhodopsins from Chlamydomonas algae.

Ogren JI, Yi A, Mamaev S, Li H, Lugtenburg J, DeGrip WJ, Spudich JL, Rothschild KJ.

Biochemistry. 2015 Jan 20;54(2):377-88. doi: 10.1021/bi501243y. Epub 2014 Dec 18.

12.

Anti-kelch-like 12 and anti-hexokinase 1: novel autoantibodies in primary biliary cirrhosis.

Norman GL, Yang CY, Ostendorff HP, Shums Z, Lim MJ, Wang J, Awad A, Hirschfield GM, Milkiewicz P, Bloch DB, Rothschild KJ, Bowlus CL, Adamopoulos IE, Leung PS, Janssen HJ, Cheung AC, Coltescu C, Gershwin ME.

Liver Int. 2015 Feb;35(2):642-51. doi: 10.1111/liv.12690. Epub 2014 Oct 10.

13.

Importing injectables.

Beer K, Rothschild K.

J Drugs Dermatol. 2014 Sep;13(9):1156-8. No abstract available.

PMID:
25226018
14.

Retinal chromophore structure and Schiff base interactions in red-shifted channelrhodopsin-1 from Chlamydomonas augustae.

Ogren JI, Mamaev S, Russano D, Li H, Spudich JL, Rothschild KJ.

Biochemistry. 2014 Jun 24;53(24):3961-70. doi: 10.1021/bi500445c. Epub 2014 Jun 16.

15.

Correlated matrix-assisted laser desorption/ionization mass spectrometry and fluorescent imaging of photocleavable peptide-coded random bead-arrays.

Lim MJ, Liu Z, Braunschweiger KI, Awad A, Rothschild KJ.

Rapid Commun Mass Spectrom. 2014 Jan 15;28(1):49-62. doi: 10.1002/rcm.6754.

16.

Multiplexed VeraCode bead-based serological immunoassay for colorectal cancer.

Ostendorff HP, Awad A, Braunschweiger KI, Liu Z, Wan Z, Rothschild KJ, Lim MJ.

J Immunol Methods. 2013 Dec 31;400-401:58-69. doi: 10.1016/j.jim.2013.09.013. Epub 2013 Oct 24.

17.

Conformational changes in the archaerhodopsin-3 proton pump: detection of conserved strongly hydrogen bonded water networks.

Clair EC, Ogren JI, Mamaev S, Kralj JM, Rothschild KJ.

J Biol Phys. 2012 Jan;38(1):153-68. doi: 10.1007/s10867-011-9246-4. Epub 2011 Dec 10.

18.

Near-IR resonance Raman spectroscopy of archaerhodopsin 3: effects of transmembrane potential.

Saint Clair EC, Ogren JI, Mamaev S, Russano D, Kralj JM, Rothschild KJ.

J Phys Chem B. 2012 Dec 20;116(50):14592-601. doi: 10.1021/jp309996a. Epub 2012 Dec 11.

19.

Improving the diagnosis of asthma in a primary care practice.

Greiver M, Lang C, Hunchuck J, Rothschild K.

Can Fam Physician. 2012 Jul;58(7):773-4, e382-4. English, French. No abstract available.

20.

Ultrasensitive measurements of microbial rhodopsin photocycles using photochromic FRET.

Bayraktar H, Fields AP, Kralj JM, Spudich JL, Rothschild KJ, Cohen AE.

Photochem Photobiol. 2012 Jan-Feb;88(1):90-7. doi: 10.1111/j.1751-1097.2011.01011.x. Epub 2011 Nov 17.

21.

An ELISA-based high throughput protein truncation test for inherited breast cancer.

Lim MJ, Foster GJ, Gite S, Ostendorff HP, Narod S, Rothschild KJ.

Breast Cancer Res. 2010;12(5):R78. doi: 10.1186/bcr2722. Epub 2010 Oct 4.

22.

Feasibility and tolerability of bevacizumab in children with primary CNS tumors.

Reismüller B, Azizi AA, Peyrl A, Heinrich M, Gruber-Olipitz M, Luckner D, Rothschild KV, Slavc I.

Pediatr Blood Cancer. 2010 May;54(5):681-6. doi: 10.1002/pbc.22409.

PMID:
20066713
23.

Active water in protein-protein communication within the membrane: the case of SRII-HtrII signal relay.

Bergo VB, Spudich EN, Spudich JL, Rothschild KJ.

Biochemistry. 2009 Feb 10;48(5):811-3. doi: 10.1021/bi802180a.

24.

His-75 in proteorhodopsin, a novel component in light-driven proton translocation by primary pumps.

Bergo VB, Sineshchekov OA, Kralj JM, Partha R, Spudich EN, Rothschild KJ, Spudich JL.

J Biol Chem. 2009 Jan 30;284(5):2836-43. doi: 10.1074/jbc.M803792200. Epub 2008 Nov 17.

25.

Different structural changes occur in blue- and green-proteorhodopsins during the primary photoreaction.

Amsden JJ, Kralj JM, Bergo VB, Spudich EN, Spudich JL, Rothschild KJ.

Biochemistry. 2008 Nov 4;47(44):11490-8. doi: 10.1021/bi800945t. Epub 2008 Oct 9.

26.

Photocleavage-based affinity purification and printing of cell-free expressed proteins: application to proteome microarrays.

Lim M, Rothschild KJ.

Anal Biochem. 2008 Dec 1;383(1):103-15. doi: 10.1016/j.ab.2008.07.038. Epub 2008 Aug 12.

27.

Raman spectroscopy reveals direct chromophore interactions in the Leu/Gln105 spectral tuning switch of proteorhodopsins.

Kralj JM, Spudich EN, Spudich JL, Rothschild KJ.

J Phys Chem B. 2008 Sep 18;112(37):11770-6. doi: 10.1021/jp802629e. Epub 2008 Aug 22.

28.

Cell-free co-expression of functional membrane proteins and apolipoprotein, forming soluble nanolipoprotein particles.

Cappuccio JA, Blanchette CD, Sulchek TA, Arroyo ES, Kralj JM, Hinz AK, Kuhn EA, Chromy BA, Segelke BW, Rothschild KJ, Fletcher JE, Katzen F, Peterson TC, Kudlicki WA, Bench G, Hoeprich PD, Coleman MA.

Mol Cell Proteomics. 2008 Nov;7(11):2246-53. doi: 10.1074/mcp.M800191-MCP200. Epub 2008 Jul 4.

29.

Cell-free protein synthesis systems: biotechnological applications.

Gite S, Lim M, Rothschild KJ.

Biotechnol Genet Eng Rev. 2006;22:151-69. Review. No abstract available.

PMID:
18476330
30.

Protonation state of Glu142 differs in the green- and blue-absorbing variants of proteorhodopsin.

Kralj JM, Bergo VB, Amsden JJ, Spudich EN, Spudich JL, Rothschild KJ.

Biochemistry. 2008 Mar 18;47(11):3447-53. doi: 10.1021/bi7018964. Epub 2008 Feb 20.

PMID:
18284210
31.

Subpicosecond protein backbone changes detected during the green-absorbing proteorhodopsin primary photoreaction.

Amsden JJ, Kralj JM, Chieffo LR, Wang X, Erramilli S, Spudich EN, Spudich JL, Ziegler LD, Rothschild KJ.

J Phys Chem B. 2007 Oct 11;111(40):11824-31. Epub 2007 Sep 19.

PMID:
17880126
32.

Conformational changes in the photocycle of Anabaena sensory rhodopsin: absence of the Schiff base counterion protonation signal.

Bergo VB, Ntefidou M, Trivedi VD, Amsden JJ, Kralj JM, Rothschild KJ, Spudich JL.

J Biol Chem. 2006 Jun 2;281(22):15208-14. Epub 2006 Mar 14.

33.

Conformational dynamics of amyloid beta-protein assembly probed using intrinsic fluorescence.

Maji SK, Amsden JJ, Rothschild KJ, Condron MM, Teplow DB.

Biochemistry. 2005 Oct 11;44(40):13365-76.

34.

N-terminal labeling of proteins using initiator tRNA.

Olejnik J, Gite S, Mamaev S, Rothschild KJ.

Methods. 2005 Jul;36(3):252-60.

PMID:
16076451
35.

Photoactivation perturbs the membrane-embedded contacts between sensory rhodopsin II and its transducer.

Bergo VB, Spudich EN, Rothschild KJ, Spudich JL.

J Biol Chem. 2005 Aug 5;280(31):28365-9. Epub 2005 Jun 10.

36.

Structural changes in the photoactive site of proteorhodopsin during the primary photoreaction.

Bergo V, Amsden JJ, Spudich EN, Spudich JL, Rothschild KJ.

Biochemistry. 2004 Jul 20;43(28):9075-83.

PMID:
15248764
37.

Cell-free N-terminal protein labeling using initiator suppressor tRNA.

Mamaev S, Olejnik J, Olejnik EK, Rothschild KJ.

Anal Biochem. 2004 Mar 1;326(1):25-32.

PMID:
14769332
38.

Conformational changes detected in a sensory rhodopsin II-transducer complex.

Bergo V, Spudich EN, Spudich JL, Rothschild KJ.

J Biol Chem. 2003 Sep 19;278(38):36556-62. Epub 2003 Jun 23.

39.

Methionine changes in bacteriorhodopsin detected by FTIR and cell-free selenomethionine substitution.

Bergo V, Mamaev S, Olejnik J, Rothschild KJ.

Biophys J. 2003 Feb;84(2 Pt 1):960-6.

40.

A high-throughput nonisotopic protein truncation test.

Gite S, Lim M, Carlson R, Olejnik J, Zehnbauer B, Rothschild K.

Nat Biotechnol. 2003 Feb;21(2):194-7. Epub 2003 Jan 13. Erratum in: Nat Biotechnol. 2003 Sep;21(9):1098.

PMID:
12524552
41.

A Fourier transform infrared study of Neurospora rhodopsin: similarities with archaeal rhodopsins.

Bergo V, Spudich EN, Spudich JL, Rothschild KJ.

Photochem Photobiol. 2002 Sep;76(3):341-9.

PMID:
12403457
42.

Photochemical control of the infectivity of adenoviral vectors using a novel photocleavable biotinylation reagent.

Pandori MW, Hobson DA, Olejnik J, Krzymanska-Olejnik E, Rothschild KJ, Palmer AA, Phillips TJ, Sano T.

Chem Biol. 2002 May;9(5):567-73.

43.

Matrix-assisted laser desorption/ionization mass spectrometry of DNA using photocleavable biotin.

Hahner S, Olejnik J, Lüdemann HC, Krzymañska-Olejnik E, Hillenkamp F, Rothschild KJ.

Biomol Eng. 1999 Dec 31;16(1-4):127-33.

PMID:
10796995
44.

FTIR analysis of the SII540 intermediate of sensory rhodopsin II: Asp73 is the Schiff base proton acceptor.

Bergo V, Spudich EN, Scott KL, Spudich JL, Rothschild KJ.

Biochemistry. 2000 Mar 21;39(11):2823-30.

PMID:
10715101
45.

Ultrasensitive fluorescence-based detection of nascent proteins in gels.

Gite S, Mamaev S, Olejnik J, Rothschild K.

Anal Biochem. 2000 Mar 15;279(2):218-25.

PMID:
10706791
46.

Photoactivation of rhodopsin: interplay between protein and chromophore.

DeGrip WJ, DeLange F, Klaassen CH, Verdegem PJ, Wallace-Williams S, Creemers AF, Bergo V, Bovee PH, Raap J, Rothschild KJ, DeGroot HJ, Lugtenburg J.

Novartis Found Symp. 1999;224:102-18; discussion 118-23.

PMID:
10614048
47.

Photocleavable peptide-DNA conjugates: synthesis and applications to DNA analysis using MALDI-MS.

Olejnik J, Lüdemann HC, Krzymanska-Olejnik E, Berkenkamp S, Hillenkamp F, Rothschild KJ.

Nucleic Acids Res. 1999 Dec 1;27(23):4626-31.

48.

Probing intramolecular orientations in rhodopsin and metarhodopsin II by polarized infrared difference spectroscopy.

DeLange F, Bovee-Geurts PH, Pistorius AM, Rothschild KJ, DeGrip WJ.

Biochemistry. 1999 Oct 5;38(40):13200-9.

PMID:
10529192
49.

tRNA-mediated protein engineering.

Rothschild KJ, Gite S.

Curr Opin Biotechnol. 1999 Feb;10(1):64-70. Review.

PMID:
10047513
50.

Tyrosine structural changes detected during the photoactivation of rhodopsin.

DeLange F, Klaassen CH, Wallace-Williams SE, Bovee-Geurts PH, Liu XM, DeGrip WJ, Rothschild KJ.

J Biol Chem. 1998 Sep 11;273(37):23735-9.

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