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Items: 1 to 50 of 502

1.

Bifidobacterium and Lactobacillus Composition at Species Level and Gut Microbiota Diversity in Infants before 6 Weeks.

Yang B, Chen Y, Stanton C, Ross RP, Lee YK, Zhao J, Zhang H, Chen W.

Int J Mol Sci. 2019 Jul 5;20(13). pii: E3306. doi: 10.3390/ijms20133306.

2.

Corrigendum to "Effects of therapeutic hypothermia on the gut microbiota and metabolome of infants suffering hypoxic-ischemic encephalopathy at birth" [Int. J. Biochem. Cell Biol. 93 (December) (2017), 110-118].

Watkins C, Murphy K, Yen S, Carafa I, Dempsey EM, O' Shea CA, Allen-Vercoe E, Ross RP, Stanton C, Ryan CA.

Int J Biochem Cell Biol. 2019 Jun 26:105550. doi: 10.1016/j.biocel.2019.05.019. [Epub ahead of print] No abstract available.

PMID:
31253426
3.

Precision Nutrition and the Microbiome Part II: Potential Opportunities and Pathways to Commercialisation.

Mills S, Lane JA, Smith GJ, Grimaldi KA, Ross RP, Stanton C.

Nutrients. 2019 Jun 27;11(7). pii: E1468. doi: 10.3390/nu11071468. Review.

4.

Role of 10-hydroxy-cis-12-octadecenic acid in transforming linoleic acid into conjugated linoleic acid by bifidobacteria.

Gao H, Yang B, Stanton C, Ross RP, Zhang H, Chen H, Chen W.

Appl Microbiol Biotechnol. 2019 Jun 27. doi: 10.1007/s00253-019-09886-w. [Epub ahead of print]

PMID:
31250059
5.

Prebiotics from Seaweeds: An Ocean of Opportunity?

Cherry P, Yadav S, Strain CR, Allsopp PJ, McSorley EM, Ross RP, Stanton C.

Mar Drugs. 2019 Jun 1;17(6). pii: E327. doi: 10.3390/md17060327. Review.

6.

Potential for enriching next-generation health-promoting gut bacteria through prebiotics and other dietary components.

Lordan C, Thapa D, Ross RP, Cotter PD.

Gut Microbes. 2019 May 22:1-20. doi: 10.1080/19490976.2019.1613124. [Epub ahead of print]

PMID:
31116628
7.

Paediatrician's perspective of infant gut microbiome research: current status and challenges.

Ryan PM, Stanton C, Ross RP, Kelly AL, Dempsey E, Ryan CA.

Arch Dis Child. 2019 Jul;104(7):701-705. doi: 10.1136/archdischild-2019-316891. Epub 2019 May 21. Review.

PMID:
31113768
8.

Precision Nutrition and the Microbiome, Part I: Current State of the Science.

Mills S, Stanton C, Lane JA, Smith GJ, Ross RP.

Nutrients. 2019 Apr 24;11(4). pii: E923. doi: 10.3390/nu11040923. Review.

9.

Evaluation of Phage Therapy in the Context of Enterococcus faecalis and Its Associated Diseases.

Bolocan AS, Upadrasta A, Bettio PHA, Clooney AG, Draper LA, Ross RP, Hill C.

Viruses. 2019 Apr 20;11(4). pii: E366. doi: 10.3390/v11040366. Review.

10.

Perinatal factors affect the gut microbiota up to four years after birth.

Fouhy F, Watkins C, Hill CJ, O'Shea CA, Nagle B, Dempsey EM, O'Toole PW, Ross RP, Ryan CA, Stanton C.

Nat Commun. 2019 Apr 3;10(1):1517. doi: 10.1038/s41467-019-09252-4.

11.

Advances in Infant Formula Science.

Ahern GJ, Hennessy AA, Ryan CA, Ross RP, Stanton C.

Annu Rev Food Sci Technol. 2019 Mar 25;10:75-102. doi: 10.1146/annurev-food-081318-104308.

PMID:
30908947
12.

Lactobacillus gasseri APC 678 Reduces Shedding of the Pathogen Clostridium difficile in a Murine Model.

Quigley L, Coakley M, Alemayehu D, Rea MC, Casey PG, O'Sullivan Ó, Murphy E, Kiely B, Cotter PD, Hill C, Ross RP.

Front Microbiol. 2019 Feb 20;10:273. doi: 10.3389/fmicb.2019.00273. eCollection 2019.

13.

A ropy exopolysaccharide producing strain Bifidobacterium longum subsp. longum YS108R alleviates DSS-induced colitis by maintenance of the mucosal barrier and gut microbiota modulation.

Yan S, Yang B, Zhao J, Zhao J, Stanton C, Ross RP, Zhang H, Chen W.

Food Funct. 2019 Mar 20;10(3):1595-1608. doi: 10.1039/c9fo00014c.

PMID:
30806428
14.

Lactobacillus mucosae DPC 6426 as a bile-modifying and immunomodulatory microbe.

Ryan PM, Stolte EH, London LEE, Wells JM, Long SL, Joyce SA, Gahan CGM, Fitzgerald GF, Ross RP, Caplice NM, Stanton C.

BMC Microbiol. 2019 Feb 8;19(1):33. doi: 10.1186/s12866-019-1403-0.

15.

Choice of assembly software has a critical impact on virome characterisation.

Sutton TDS, Clooney AG, Ryan FJ, Ross RP, Hill C.

Microbiome. 2019 Jan 28;7(1):12. doi: 10.1186/s40168-019-0626-5.

16.

Retention of Microbiota Diversity by Lactose-Free Milk in a Mouse Model of Elderly Gut Microbiota.

Ntemiri A, Ribière C, Stanton C, Ross RP, O'Connor EM, O'Toole PW.

J Agric Food Chem. 2019 Feb 20;67(7):2098-2112. doi: 10.1021/acs.jafc.8b06414. Epub 2019 Feb 7.

PMID:
30665298
17.

Human skin microbiota is a rich source of bacteriocin-producing staphylococci that kill human pathogens.

O'Sullivan JN, Rea MC, O'Connor PM, Hill C, Ross RP.

FEMS Microbiol Ecol. 2019 Feb 1;95(2). doi: 10.1093/femsec/fiy241.

18.

Protecting bactofencin A to enable its antimicrobial activity using mesoporous matrices.

Durack E, Mallen S, O'Connor PM, Rea MC, Ross RP, Hill C, Hudson S.

Int J Pharm. 2019 Mar 10;558:9-17. doi: 10.1016/j.ijpharm.2018.12.035. Epub 2018 Dec 19.

PMID:
30578979
19.

Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa.

Fitzgerald CB, Shkoporov AN, Sutton TDS, Chaplin AV, Velayudhan V, Ross RP, Hill C.

BMC Genomics. 2018 Dec 14;19(1):931. doi: 10.1186/s12864-018-5313-6.

20.

Long-term colonisation with donor bacteriophages following successful faecal microbial transplantation.

Draper LA, Ryan FJ, Smith MK, Jalanka J, Mattila E, Arkkila PA, Ross RP, Satokari R, Hill C.

Microbiome. 2018 Dec 10;6(1):220. doi: 10.1186/s40168-018-0598-x.

21.

Biology and Taxonomy of crAss-like Bacteriophages, the Most Abundant Virus in the Human Gut.

Guerin E, Shkoporov A, Stockdale SR, Clooney AG, Ryan FJ, Sutton TDS, Draper LA, Gonzalez-Tortuero E, Ross RP, Hill C.

Cell Host Microbe. 2018 Nov 14;24(5):653-664.e6. doi: 10.1016/j.chom.2018.10.002. Epub 2018 Oct 25.

PMID:
30449316
22.

ΦCrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis.

Shkoporov AN, Khokhlova EV, Fitzgerald CB, Stockdale SR, Draper LA, Ross RP, Hill C.

Nat Commun. 2018 Nov 14;9(1):4781. doi: 10.1038/s41467-018-07225-7.

23.

Genus-Wide Assessment of Antibiotic Resistance in Lactobacillus spp.

Campedelli I, Mathur H, Salvetti E, Clarke S, Rea MC, Torriani S, Ross RP, Hill C, O'Toole PW.

Appl Environ Microbiol. 2018 Dec 13;85(1). pii: e01738-18. doi: 10.1128/AEM.01738-18. Print 2019 Jan 1.

24.

In silico Prediction and Exploration of Potential Bacteriocin Gene Clusters Within the Bacterial Genus Geobacillus.

Egan K, Field D, Ross RP, Cotter PD, Hill C.

Front Microbiol. 2018 Sep 20;9:2116. doi: 10.3389/fmicb.2018.02116. eCollection 2018.

25.

The Lactobacillus casei Group: History and Health Related Applications.

Hill D, Sugrue I, Tobin C, Hill C, Stanton C, Ross RP.

Front Microbiol. 2018 Sep 10;9:2107. doi: 10.3389/fmicb.2018.02107. eCollection 2018. Review.

26.

Delivery of a hydrophobic drug into the lower gastrointestinal system via an endogenous enzyme-mediated carrier mechanism: An in vitro study.

Bannigan P, Durack E, Mathur H, Rea MC, Ross RP, Hudson SP.

Eur J Pharm Biopharm. 2018 Dec;133:12-19. doi: 10.1016/j.ejpb.2018.09.019. Epub 2018 Sep 26.

PMID:
30267836
27.

Isolation and characterization of an exopolysaccharide-producing Leuconostoc citreum strain from artisanal cheese.

Domingos-Lopes MFP, Lamosa P, Stanton C, Ross RP, Silva CCG.

Lett Appl Microbiol. 2018 Dec;67(6):570-578. doi: 10.1111/lam.13073. Epub 2018 Oct 18.

PMID:
30218539
28.

The Use of a Mini-Bioreactor Fermentation System as a Reproducible, High-Throughput ex vivo Batch Model of the Distal Colon.

O'Donnell MM, Rea MC, Shanahan F, Ross RP.

Front Microbiol. 2018 Aug 10;9:1844. doi: 10.3389/fmicb.2018.01844. eCollection 2018.

29.

Corrigendum to "Quality characteristics, chemical composition, and sensory properties of butter from cows on pasture versus indoor feeding systems" (J. Dairy Sci. 99:9441-9460).

O'Callaghan TF, Faulkner H, McAuliffe S, O'Sullivan MG, Hennessy D, Dillon P, Kilcawley KN, Stanton C, Ross RP.

J Dairy Sci. 2018 Sep;101(9):8616. doi: 10.3168/jds.2018-101-9-8616. No abstract available.

PMID:
30122605
30.

Corrigendum to "Effect of pasture versus indoor feeding systems on raw milk composition and quality over an entire lactation" (J. Dairy Sci. 99:9424-9440).

O'Callaghan TF, Hennessy D, McAuliffe S, Kilcawley KN, O'Donovan M, Dillon P, Ross RP, Stanton C.

J Dairy Sci. 2018 Sep;101(9):8615. doi: 10.3168/jds.2018-101-9-8615. No abstract available.

PMID:
30122604
31.

Heterologous Expression of Biopreservative Bacteriocins With a View to Low Cost Production.

Mesa-Pereira B, Rea MC, Cotter PD, Hill C, Ross RP.

Front Microbiol. 2018 Jul 26;9:1654. doi: 10.3389/fmicb.2018.01654. eCollection 2018. Review.

32.
33.

RNA Phage Biology in a Metagenomic Era.

Callanan J, Stockdale SR, Shkoporov A, Draper LA, Ross RP, Hill C.

Viruses. 2018 Jul 21;10(7). pii: E386. doi: 10.3390/v10070386. Review.

34.

Reincarnation of Bacteriocins From the Lactobacillus Pangenomic Graveyard.

Collins FWJ, Mesa-Pereira B, O'Connor PM, Rea MC, Hill C, Ross RP.

Front Microbiol. 2018 Jul 2;9:1298. doi: 10.3389/fmicb.2018.01298. eCollection 2018.

35.

Oral Delivery of Nisin in Resistant Starch Based Matrices Alters the Gut Microbiota in Mice.

Gough R, Cabrera Rubio R, O'Connor PM, Crispie F, Brodkorb A, Miao S, Hill C, Ross RP, Cotter PD, Nilaweera KN, Rea MC.

Front Microbiol. 2018 Jun 15;9:1186. doi: 10.3389/fmicb.2018.01186. eCollection 2018.

36.

Dose-interval study of a dual probiotic in preterm infants.

Watkins C, Murphy K, Dempsey EM, O'Shea CA, Murphy BP, O'Toole PW, Ross RP, Stanton C, Ryan CA.

Arch Dis Child Fetal Neonatal Ed. 2019 Mar;104(2):F159-F164. doi: 10.1136/archdischild-2017-313468. Epub 2018 Jun 20.

PMID:
29925539
37.

Dietary Conjugated Linoleic Acid-Enriched Cheeses Influence the Levels of Circulating n-3 Highly Unsaturated Fatty Acids in Humans.

Murru E, Carta G, Cordeddu L, Melis MP, Desogus E, Ansar H, Chilliard Y, Ferlay A, Stanton C, Coakley M, Ross RP, Piredda G, Addis M, Mele MC, Cannelli G, Banni S, Manca C.

Int J Mol Sci. 2018 Jun 11;19(6). pii: E1730. doi: 10.3390/ijms19061730.

38.

Maternal omega-3 fatty acids regulate offspring obesity through persistent modulation of gut microbiota.

Robertson RC, Kaliannan K, Strain CR, Ross RP, Stanton C, Kang JX.

Microbiome. 2018 May 24;6(1):95. doi: 10.1186/s40168-018-0476-6.

39.

Phages & antibiotic resistance: are the most abundant entities on earth ready for a comeback?

Hill C, Mills S, Ross RP.

Future Microbiol. 2018 May;13:711-726. doi: 10.2217/fmb-2017-0261. Epub 2018 May 24. Review.

40.

The Gut Microbiota of Marine Fish.

Egerton S, Culloty S, Whooley J, Stanton C, Ross RP.

Front Microbiol. 2018 May 4;9:873. doi: 10.3389/fmicb.2018.00873. eCollection 2018. Review.

41.

Fighting biofilms with lantibiotics and other groups of bacteriocins.

Mathur H, Field D, Rea MC, Cotter PD, Hill C, Ross RP.

NPJ Biofilms Microbiomes. 2018 Apr 19;4:9. doi: 10.1038/s41522-018-0053-6. eCollection 2018. Review.

42.

Tryptophan metabolic profile in term and preterm breast milk: implications for health.

O'Rourke L, Clarke G, Nolan A, Watkins C, Dinan TG, Stanton C, Ross RP, Ryan CA.

J Nutr Sci. 2018 Apr 4;7:e13. doi: 10.1017/jns.2017.69. eCollection 2018.

43.

Pasture Feeding Changes the Bovine Rumen and Milk Metabolome.

O'Callaghan TF, Vázquez-Fresno R, Serra-Cayuela A, Dong E, Mandal R, Hennessy D, McAuliffe S, Dillon P, Wishart DS, Stanton C, Ross RP.

Metabolites. 2018 Apr 6;8(2). pii: E27. doi: 10.3390/metabo8020027.

44.

Reproducible protocols for metagenomic analysis of human faecal phageomes.

Shkoporov AN, Ryan FJ, Draper LA, Forde A, Stockdale SR, Daly KM, McDonnell SA, Nolan JA, Sutton TDS, Dalmasso M, McCann A, Ross RP, Hill C.

Microbiome. 2018 Apr 10;6(1):68. doi: 10.1186/s40168-018-0446-z.

45.

The intestinal protist Blastocystis is not a common member of the healthy infant gut microbiota in a Westernized country (Ireland).

Scanlan PD, Hill CJ, Ross RP, Ryan CA, Stanton C, Cotter PD.

Parasitology. 2018 Sep;145(10):1274-1278. doi: 10.1017/S0031182018000033. Epub 2018 Feb 5.

PMID:
29397054
46.

Nutraceuticals to promote neuronal plasticity in response to corticosterone-induced stress in human neuroblastoma cells.

Gite S, Ross RP, Kirke D, Guihéneuf F, Aussant J, Stengel DB, Dinan TG, Cryan JF, Stanton C.

Nutr Neurosci. 2019 Aug;22(8):551-568. doi: 10.1080/1028415X.2017.1418728. Epub 2018 Jan 29.

PMID:
29378496
47.

The microbiology and treatment of human mastitis.

Angelopoulou A, Field D, Ryan CA, Stanton C, Hill C, Ross RP.

Med Microbiol Immunol. 2018 Apr;207(2):83-94. doi: 10.1007/s00430-017-0532-z. Epub 2018 Jan 19. Review.

PMID:
29350290
48.

Development and implementation of multilocus sequence typing to study the diversity of the yeast Kluyveromyces marxianus in Italian cheeses.

Tittarelli F, Varela JA, Gethins L, Stanton C, Ross RP, Suzzi G, Grazia L, Tofalo R, Morrissey JP.

Microb Genom. 2018 Feb;4(2). doi: 10.1099/mgen.0.000153. Epub 2018 Jan 18.

49.

Gene-trait matching across the Bifidobacterium longum pan-genome reveals considerable diversity in carbohydrate catabolism among human infant strains.

Arboleya S, Bottacini F, O'Connell-Motherway M, Ryan CA, Ross RP, van Sinderen D, Stanton C.

BMC Genomics. 2018 Jan 8;19(1):33. doi: 10.1186/s12864-017-4388-9.

50.

Characterization of protein hydrolysates from blue whiting (Micromesistius poutassou) and their application in beverage fortification.

Egerton S, Culloty S, Whooley J, Stanton C, Ross RP.

Food Chem. 2018 Apr 15;245:698-706. doi: 10.1016/j.foodchem.2017.10.107. Epub 2017 Oct 21.

PMID:
29287428

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