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Virus-like Vesicles Expressing Multiple Antigens for Immunotherapy of Chronic Hepatitis B.

Yarovinsky TO, Mason SW, Menon M, Krady MM, Haslip M, Madina BR, Ma X, Moshkani S, Chiale C, Pal AC, Almassian B, Rose JK, Robek MD, Nakaar V.

iScience. 2019 Nov 22;21:391-402. doi: 10.1016/j.isci.2019.10.040. Epub 2019 Oct 24.


Manipulation of β-carotene levels in tomato fruits results in increased ABA content and extended shelf-life.

Diretto G, Frusciante S, Fabbri C, Schauer N, Busta L, Wang Z, Matas AJ, Fiore A, Rose JKC, Fernie AR, Jetter R, Mattei B, Giovannoni J, Giuliano G.

Plant Biotechnol J. 2019 Oct 24. doi: 10.1111/pbi.13283. [Epub ahead of print]


Biochemical and physiological flexibility accompanies reduced cellulose biosynthesis in Brachypodium cesa1 S830N.

Brabham C, Singh A, Stork J, Rong Y, Kumar I, Kikuchi K, Yingling YG, Brutnell TP, Rose JKC, Debolt S.

AoB Plants. 2019 Jul 13;11(5):plz041. doi: 10.1093/aobpla/plz041. eCollection 2019 Oct.


A relationship between tomato fruit softening, cuticle properties and water availability.

Romero P, Rose JKC.

Food Chem. 2019 Oct 15;295:300-310. doi: 10.1016/j.foodchem.2019.05.118. Epub 2019 May 17.


Heterologous prime-boost immunization with vesiculovirus-based vectors expressing HBV Core antigen induces CD8+ T cell responses in naïve and persistently infected mice and protects from challenge.

Chiale C, Moshkani S, Rose JK, Robek MD.

Antiviral Res. 2019 Aug;168:156-167. doi: 10.1016/j.antiviral.2019.05.014. Epub 2019 May 30.


Genetic and metabolic effects of ripening mutations and vine detachment on tomato fruit quality.

Osorio S, Carneiro RT, Lytovchenko A, McQuinn R, Sørensen I, Vallarino JG, Giovannoni JJ, Fernie AR, Rose JKC.

Plant Biotechnol J. 2019 May 26. doi: 10.1111/pbi.13176. [Epub ahead of print]


Glycerol-3-phosphate acyltransferase 6 controls filamentous pathogen interactions and cell wall properties of the tomato and Nicotiana benthamiana leaf epidermis.

Fawke S, Torode TA, Gogleva A, Fich EA, Sørensen I, Yunusov T, Rose JKC, Schornack S.

New Phytol. 2019 Aug;223(3):1547-1559. doi: 10.1111/nph.15846. Epub 2019 May 10.


The tomato HIGH PIGMENT1/DAMAGED DNA BINDING PROTEIN 1 gene contributes to regulation of fruit ripening.

Wang A, Chen D, Ma Q, Rose JKC, Fei Z, Liu Y, Giovannoni JJ.

Hortic Res. 2019 Feb 1;6:15. doi: 10.1038/s41438-018-0093-3. eCollection 2019.


A Highly Attenuated Vesicular Stomatitis Virus-Based Vaccine Platform Controls Hepatitis B Virus Replication in Mouse Models of Hepatitis B.

Moshkani S, Chiale C, Lang SM, Rose JK, Robek MD.

J Virol. 2019 Feb 19;93(5). pii: e01586-18. doi: 10.1128/JVI.01586-18. Print 2019 Mar 1.


Specific Aims Workshop: Your Grant in a Sound Bite.

Kozlowski DA, Rose JK.

J Undergrad Neurosci Educ. 2018 Sep 15;16(3):A220-A222. eCollection 2018 Summer.


A recombinant virus vaccine that protects against both Chikungunya and Zika virus infections.

Chattopadhyay A, Aguilar PV, Bopp NE, Yarovinsky TO, Weaver SC, Rose JK.

Vaccine. 2018 Jun 22;36(27):3894-3900. doi: 10.1016/j.vaccine.2018.05.095. Epub 2018 May 26.


The Genome of Artemisia annua Provides Insight into the Evolution of Asteraceae Family and Artemisinin Biosynthesis.

Shen Q, Zhang L, Liao Z, Wang S, Yan T, Shi P, Liu M, Fu X, Pan Q, Wang Y, Lv Z, Lu X, Zhang F, Jiang W, Ma Y, Chen M, Hao X, Li L, Tang Y, Lv G, Zhou Y, Sun X, Brodelius PE, Rose JKC, Tang K.

Mol Plant. 2018 Jun 4;11(6):776-788. doi: 10.1016/j.molp.2018.03.015. Epub 2018 Apr 24.


Corrigendum: Orthology Analysis and In Vivo Complementation Studies to Elucidate the Role of DIR1 during Systemic Acquired Resistance in Arabidopsis thaliana and Cucumis sativus.

Isaacs M, Carella P, Faubert J, Champigny MJ, Rose JKC, Cameron RK.

Front Plant Sci. 2018 Apr 12;9:460. doi: 10.3389/fpls.2018.00460. eCollection 2018.


The Secretome and N-Glycosylation Profiles of the Charophycean Green Alga, Penium margaritaceum, Resemble Those of Embryophytes.

Ruiz-May E, Sørensen I, Fei Z, Zhang S, Domozych DS, Rose JKC.

Proteomes. 2018 Mar 21;6(2). pii: E14. doi: 10.3390/proteomes6020014.


Natural Variation Underlies Differences in ETHYLENE RESPONSE FACTOR17 Activity in Fruit Peel Degreening.

Han Z, Hu Y, Lv Y, Rose JKC, Sun Y, Shen F, Wang Y, Zhang X, Xu X, Wu T, Han Z.

Plant Physiol. 2018 Mar;176(3):2292-2304. doi: 10.1104/pp.17.01320. Epub 2018 Feb 5.


Fruit Softening: Revisiting the Role of Pectin.

Wang D, Yeats TH, Uluisik S, Rose JKC, Seymour GB.

Trends Plant Sci. 2018 Apr;23(4):302-310. doi: 10.1016/j.tplants.2018.01.006. Epub 2018 Feb 9. Review.


High-resolution spatiotemporal transcriptome mapping of tomato fruit development and ripening.

Shinozaki Y, Nicolas P, Fernandez-Pozo N, Ma Q, Evanich DJ, Shi Y, Xu Y, Zheng Y, Snyder SI, Martin LBB, Ruiz-May E, Thannhauser TW, Chen K, Domozych DS, Catalá C, Fei Z, Mueller LA, Giovannoni JJ, Rose JKC.

Nat Commun. 2018 Jan 25;9(1):364. doi: 10.1038/s41467-017-02782-9.


Identification of tomato introgression lines with enhanced susceptibility or resistance to infection by parasitic giant dodder (Cuscuta reflexa).

Krause K, Johnsen HR, Pielach A, Lund L, Fischer K, Rose JKC.

Physiol Plant. 2018 Feb;162(2):205-218. doi: 10.1111/ppl.12660. Epub 2017 Dec 8.


Postharvest changes in LIN5-down-regulated plants suggest a role for sugar deficiency in cuticle metabolism during ripening.

Vallarino JG, Yeats TH, Maximova E, Rose JK, Fernie AR, Osorio S.

Phytochemistry. 2017 Oct;142:11-20. doi: 10.1016/j.phytochem.2017.06.007. Epub 2017 Jun 26.


Cuticle Biosynthesis in Tomato Leaves Is Developmentally Regulated by Abscisic Acid.

Martin LBB, Romero P, Fich EA, Domozych DS, Rose JKC.

Plant Physiol. 2017 Jul;174(3):1384-1398. doi: 10.1104/pp.17.00387. Epub 2017 May 8.


Transcriptome Analysis of Mango (Mangifera indica L.) Fruit Epidermal Peel to Identify Putative Cuticle-Associated Genes.

Tafolla-Arellano JC, Zheng Y, Sun H, Jiao C, Ruiz-May E, Hernández-Oñate MA, González-León A, Báez-Sañudo R, Fei Z, Domozych D, Rose JKC, Tiznado-Hernández ME.

Sci Rep. 2017 Apr 20;7:46163. doi: 10.1038/srep46163.


The Tomato Expression Atlas.

Fernandez-Pozo N, Zheng Y, Snyder SI, Nicolas P, Shinozaki Y, Fei Z, Catala C, Giovannoni JJ, Rose JKC, Mueller LA.

Bioinformatics. 2017 Aug 1;33(15):2397-2398. doi: 10.1093/bioinformatics/btx190.


A phenol-enriched cuticle is ancestral to lignin evolution in land plants.

Renault H, Alber A, Horst NA, Basilio Lopes A, Fich EA, Kriegshauser L, Wiedemann G, Ullmann P, Herrgott L, Erhardt M, Pineau E, Ehlting J, Schmitt M, Rose JK, Reski R, Werck-Reichhart D.

Nat Commun. 2017 Mar 8;8:14713. doi: 10.1038/ncomms14713.


Structural intermediates in the fusion-associated transition of vesiculovirus glycoprotein.

Baquero E, Albertini AA, Raux H, Abou-Hamdan A, Boeri-Erba E, Ouldali M, Buonocore L, Rose JK, Lepault J, Bressanelli S, Gaudin Y.

EMBO J. 2017 Mar 1;36(5):679-692. doi: 10.15252/embj.201694565. Epub 2017 Feb 10.


CUTIN SYNTHASE 2 Maintains Progressively Developing Cuticular Ridges in Arabidopsis Sepals.

Hong L, Brown J, Segerson NA, Rose JK, Roeder AH.

Mol Plant. 2017 Apr 3;10(4):560-574. doi: 10.1016/j.molp.2017.01.002. Epub 2017 Jan 19.


Chikungunya, Influenza, Nipah, and Semliki Forest Chimeric Viruses with Vesicular Stomatitis Virus: Actions in the Brain.

van den Pol AN, Mao G, Chattopadhyay A, Rose JK, Davis JN.

J Virol. 2017 Feb 28;91(6). pii: e02154-16. doi: 10.1128/JVI.02154-16. Print 2017 Mar 15.


A recombinant vesicular stomatitis virus encoding CCR5-tropic HIV-1 receptors targets HIV-1-infected cells and controls HIV-1 infection.

Okuma K, Fukagawa K, Kohma T, Takahama Y, Hamaguchi Y, Ito M, Tanaka Y, Buonocore L, Rose JK, Hamaguchi I.

Microbes Infect. 2017 Apr - May;19(4-5):277-287. doi: 10.1016/j.micinf.2016.12.004. Epub 2016 Dec 24.


TATA Box Insertion Provides a Selection Mechanism Underpinning Adaptations to Fe Deficiency.

Zhang M, Lv Y, Wang Y, Rose JK, Shen F, Han Z, Zhang X, Xu X, Wu T, Han Z.

Plant Physiol. 2017 Jan;173(1):715-727. doi: 10.1104/pp.16.01504. Epub 2016 Nov 23.


Laser microdissection of tomato fruit cell and tissue types for transcriptome profiling.

Martin LB, Nicolas P, Matas AJ, Shinozaki Y, Catalá C, Rose JK.

Nat Protoc. 2016 Dec;11(12):2376-2388. doi: 10.1038/nprot.2016.146. Epub 2016 Nov 3.


Corrigendum: Genetic improvement of tomato by targeted control of fruit softening.

Uluisik S, Chapman NH, Smith R, Poole M, Adams G, Gillis RB, Besong TM, Sheldon J, Stiegelmeyer S, Perez L, Samsulrizal N, Wang D, Fisk ID, Yang N, Baxter C, Rickett D, Fray R, Blanco-Ulate B, Powell AL, Harding SE, Craigon J, Rose JK, Fich EA, Sun L, Domozych DS, Fraser PD, Tucker GA, Grierson D, Seymour GB.

Nat Biotechnol. 2016 Oct 11;34(10):1072. doi: 10.1038/nbt1016-1072d. No abstract available.


Genetic improvement of tomato by targeted control of fruit softening.

Uluisik S, Chapman NH, Smith R, Poole M, Adams G, Gillis RB, Besong TM, Sheldon J, Stiegelmeyer S, Perez L, Samsulrizal N, Wang D, Fisk ID, Yang N, Baxter C, Rickett D, Fray R, Blanco-Ulate B, Powell AL, Harding SE, Craigon J, Rose JK, Fich EA, Sun L, Domozych DS, Fraser PD, Tucker GA, Grierson D, Seymour GB.

Nat Biotechnol. 2016 Sep;34(9):950-2. doi: 10.1038/nbt.3602. Epub 2016 Jul 25.


Live virus vaccines based on a vesicular stomatitis virus (VSV) backbone: Standardized template with key considerations for a risk/benefit assessment.

Clarke DK, Hendry RM, Singh V, Rose JK, Seligman SJ, Klug B, Kochhar S, Mac LM, Carbery B, Chen RT; Brighton Collaboration Viral Vector Vaccines Safety Working Group.

Vaccine. 2016 Dec 12;34(51):6597-6609. doi: 10.1016/j.vaccine.2016.06.071. Epub 2016 Jul 6. Review.


The Glycerol-3-Phosphate Acyltransferase GPAT6 from Tomato Plays a Central Role in Fruit Cutin Biosynthesis.

Petit J, Bres C, Mauxion JP, Tai FW, Martin LB, Fich EA, Joubès J, Rose JK, Domergue F, Rothan C.

Plant Physiol. 2016 Jun;171(2):894-913. doi: 10.1104/pp.16.00409. Epub 2016 Apr 19.


Orthology Analysis and In Vivo Complementation Studies to Elucidate the Role of DIR1 during Systemic Acquired Resistance in Arabidopsis thaliana and Cucumis sativus.

Isaacs M, Carella P, Faubert J, Rose JK, Cameron RK.

Front Plant Sci. 2016 May 3;7:566. doi: 10.3389/fpls.2016.00566. eCollection 2016. Erratum in: Front Plant Sci. 2018 Apr 12;9:460.


Application of wide selected-ion monitoring data-independent acquisition to identify tomato fruit proteins regulated by the CUTIN DEFICIENT2 transcription factor.

Martin LB, Sherwood RW, Nicklay JJ, Yang Y, Muratore-Schroeder TL, Anderson ET, Thannhauser TW, Rose JK, Zhang S.

Proteomics. 2016 Aug;16(15-16):2081-94. doi: 10.1002/pmic.201500450. Epub 2016 May 10.


The Plant Polyester Cutin: Biosynthesis, Structure, and Biological Roles.

Fich EA, Segerson NA, Rose JK.

Annu Rev Plant Biol. 2016 Apr 29;67:207-33. doi: 10.1146/annurev-arplant-043015-111929. Epub 2016 Feb 8. Review.


Hemagglutinin Stalk Immunity Reduces Influenza Virus Replication and Transmission in Ferrets.

Nachbagauer R, Miller MS, Hai R, Ryder AB, Rose JK, Palese P, García-Sastre A, Krammer F, Albrecht RA.

J Virol. 2015 Dec 30;90(6):3268-73. doi: 10.1128/JVI.02481-15.


Vaccination with Vesicular Stomatitis Virus-Vectored Chimeric Hemagglutinins Protects Mice against Divergent Influenza Virus Challenge Strains.

Ryder AB, Nachbagauer R, Buonocore L, Palese P, Krammer F, Rose JK.

J Virol. 2015 Dec 16;90(5):2544-50. doi: 10.1128/JVI.02598-15.


Solid-State (13)C NMR Delineates the Architectural Design of Biopolymers in Native and Genetically Altered Tomato Fruit Cuticles.

Chatterjee S, Matas AJ, Isaacson T, Kehlet C, Rose JK, Stark RE.

Biomacromolecules. 2016 Jan 11;17(1):215-24. doi: 10.1021/acs.biomac.5b01321. Epub 2015 Dec 24.


Virus-Like Vesicle-Based Therapeutic Vaccine Vectors for Chronic Hepatitis B Virus Infection.

Reynolds TD, Buonocore L, Rose NF, Rose JK, Robek MD.

J Virol. 2015 Oct;89(20):10407-15. doi: 10.1128/JVI.01184-15. Epub 2015 Aug 5.


Ethylene suppresses tomato (Solanum lycopersicum) fruit set through modification of gibberellin metabolism.

Shinozaki Y, Hao S, Kojima M, Sakakibara H, Ozeki-Iida Y, Zheng Y, Fei Z, Zhong S, Giovannoni JJ, Rose JK, Okabe Y, Heta Y, Ezura H, Ariizumi T.

Plant J. 2015 Jul;83(2):237-51. doi: 10.1111/tpj.12882. Epub 2015 Jun 11.


Dissecting the molecular signatures of apical cell-type shoot meristems from two ancient land plant lineages.

Frank MH, Edwards MB, Schultz ER, McKain MR, Fei Z, Sørensen I, Rose JK, Scanlon MJ.

New Phytol. 2015 Aug;207(3):893-904. doi: 10.1111/nph.13407. Epub 2015 Apr 21.


Transcriptional dynamics of Phytophthora infestans during sequential stages of hemibiotrophic infection of tomato.

Zuluaga AP, Vega-Arreguín JC, Fei Z, Ponnala L, Lee SJ, Matas AJ, Patev S, Fry WE, Rose JK.

Mol Plant Pathol. 2016 Jan;17(1):29-41. doi: 10.1111/mpp.12263. Epub 2015 May 8.


Cell wall composition profiling of parasitic giant dodder (Cuscuta reflexa) and its hosts: a priori differences and induced changes.

Johnsen HR, Striberny B, Olsen S, Vidal-Melgosa S, Fangel JU, Willats WG, Rose JK, Krause K.

New Phytol. 2015 Aug;207(3):805-16. doi: 10.1111/nph.13378. Epub 2015 Mar 23.


Analysis of the tomato leaf transcriptome during successive hemibiotrophic stages of a compatible interaction with the oomycete pathogen Phytophthora infestans.

Zuluaga AP, Vega-Arreguín JC, Fei Z, Matas AJ, Patev S, Fry WE, Rose JK.

Mol Plant Pathol. 2016 Jan;17(1):42-54. doi: 10.1111/mpp.12260. Epub 2015 May 8.


Structure of the low pH conformation of Chandipura virus G reveals important features in the evolution of the vesiculovirus glycoprotein.

Baquero E, Albertini AA, Raux H, Buonocore L, Rose JK, Bressanelli S, Gaudin Y.

PLoS Pathog. 2015 Mar 24;11(3):e1004756. doi: 10.1371/journal.ppat.1004756. eCollection 2015 Mar.


Development of an infectious surrogate hepatitis C virus based on a recombinant vesicular stomatitis virus expressing hepatitis C virus envelope glycoproteins and green fluorescent protein.

Okuma K, Fukagawa K, Tateyama S, Kohma T, Mochida K, Hiyoshi M, Takahama Y, Hamaguchi Y, Hirose K, Buonocore L, Rose JK, Mizuochi T, Hamaguchi I.

Jpn J Infect Dis. 2015;68(3):203-8. doi: 10.7883/yoken.JJID.2014.328. Epub 2014 Dec 24.


Antigenic requirement for Gag in a vaccine that protects against high-dose mucosal challenge with simian immunodeficiency virus.

Schell JB, Bahl K, Folta-Stogniew E, Rose N, Buonocore L, Marx PA, Gambhira R, Rose JK.

Virology. 2015 Feb;476:405-412. doi: 10.1016/j.virol.2014.12.027. Epub 2015 Jan 12.


A viable recombinant rhabdovirus lacking its glycoprotein gene and expressing influenza virus hemagglutinin and neuraminidase is a potent influenza vaccine.

Ryder AB, Buonocore L, Vogel L, Nachbagauer R, Krammer F, Rose JK.

J Virol. 2015 Mar;89(5):2820-30. doi: 10.1128/JVI.03246-14. Epub 2014 Dec 24.

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