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Items: 1 to 50 of 119

1.

Ramachandran maps for side chains in globular proteins.

Rose GD.

Proteins. 2019 May;87(5):357-364. doi: 10.1002/prot.25656. Epub 2019 Jan 22.

PMID:
30629766
2.

What is life? Part II.

Rose GD.

Proteins. 2019 Mar;87(3):174-175. doi: 10.1002/prot.25649. Epub 2019 Jan 11. No abstract available.

PMID:
30576005
3.

How the hydrophobic factor drives protein folding.

Baldwin RL, Rose GD.

Proc Natl Acad Sci U S A. 2016 Nov 1;113(44):12462-12466. Epub 2016 Oct 17.

4.

Reliability of forced internal rotation and active internal rotation to assess lateral instability of the biceps pulley.

Arrigoni P, Rose GD, D'Ambrosi R, Rotundo G, Campagna V, Pirani P, Panascì M, Petriccioli D, Bertone C, Grasso A, Latte C, Costa A, Viola G, DE Giorgi S, Panella A, Padua R, Beccarini A, Salcher B, Olivieri M, Mugnaini M, Pannone A, Ceoldo C, Longo UG, Denaro V, Cerciello S, Panni AS, Avanzi P, Zorzi C, Ragone V, Castagna A, Randelli P.

Joints. 2015 Jun 8;3(1):20-4. eCollection 2015 Jan-Mar.

5.

On interpretation of protein X-ray structures: Planarity of the peptide unit.

Chellapa GD, Rose GD.

Proteins. 2015 Sep;83(9):1687-92. doi: 10.1002/prot.24854. Epub 2015 Jul 21.

PMID:
26148341
6.

Calcific tendinitis of the shoulder.

DE Carli A, Pulcinelli F, Rose GD, Pitino D, Ferretti A.

Joints. 2014 Aug 1;2(3):130-6. eCollection 2014 Jul-Sep.

7.

Can arthroscopic revision surgery for shoulder instability be a fair option?

De Giorgi S, Garofalo R, Tafuri S, Cesari E, Rose GD, Castagna A.

Muscles Ligaments Tendons J. 2014 Jul 14;4(2):226-31. eCollection 2014 Apr.

9.

Deep partial rotator cuff tear: transtendon repair or tear completion and repair? A randomized clinical trial.

Castagna A, Borroni M, Garofalo R, Rose GD, Cesari E, Padua R, Conti M, Gumina S.

Knee Surg Sports Traumatol Arthrosc. 2015 Feb;23(2):460-3. doi: 10.1007/s00167-013-2536-6. Epub 2013 May 21.

PMID:
23689964
10.

Molten globules, entropy-driven conformational change and protein folding.

Baldwin RL, Rose GD.

Curr Opin Struct Biol. 2013 Feb;23(1):4-10. doi: 10.1016/j.sbi.2012.11.004. Epub 2012 Dec 10. Review.

PMID:
23237704
11.

Biochemical markers as predictors of bone remodelling in dental disorders: a narrative description of literature.

Duvina M, Barbato L, Brancato L, Rose GD, Amunni F, Tonelli P.

Clin Cases Miner Bone Metab. 2012 May;9(2):100-6. Epub 2012 Sep 30.

12.

Reducing the dimensionality of the protein-folding search problem.

Chellapa GD, Rose GD.

Protein Sci. 2012 Aug;21(8):1231-40. doi: 10.1002/pro.2106. Epub 2012 Jul 6.

13.

A thermodynamic definition of protein domains.

Porter LL, Rose GD.

Proc Natl Acad Sci U S A. 2012 Jun 12;109(24):9420-5. doi: 10.1073/pnas.1202604109. Epub 2012 May 25.

14.

Bone regeneration in dentistry.

Tonelli P, Duvina M, Barbato L, Biondi E, Nuti N, Brancato L, Rose GD.

Clin Cases Miner Bone Metab. 2011 Sep;8(3):24-8.

15.

Folding and binding: lingering questions, emerging answers.

Itzhaki LS, Rose GD.

Curr Opin Struct Biol. 2012 Feb;22(1):1-3. doi: 10.1016/j.sbi.2012.01.001. Epub 2012 Jan 20. No abstract available.

PMID:
22265341
16.

The Levinthal paradox of the interactome.

Tompa P, Rose GD.

Protein Sci. 2011 Dec;20(12):2074-9. doi: 10.1002/pro.747. Epub 2011 Nov 9.

17.

Comment on "Revisiting the Ramachandran plot from a new angle".

Porter LL, Rose GD.

Protein Sci. 2011 Nov;20(11):1771-3; author reply 1774. doi: 10.1002/pro.724. Epub 2011 Oct 13. No abstract available.

18.

Counting peptide-water hydrogen bonds in unfolded proteins.

Gong H, Porter LL, Rose GD.

Protein Sci. 2011 Feb;20(2):417-27. doi: 10.1002/pro.574.

19.

Redrawing the Ramachandran plot after inclusion of hydrogen-bonding constraints.

Porter LL, Rose GD.

Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):109-13. doi: 10.1073/pnas.1014674107. Epub 2010 Dec 8.

20.

Dry molten globule intermediates and the mechanism of protein unfolding.

Baldwin RL, Frieden C, Rose GD.

Proteins. 2010 Oct;78(13):2725-37. doi: 10.1002/prot.22803.

21.

Physical-chemical determinants of coil conformations in globular proteins.

Perskie LL, Rose GD.

Protein Sci. 2010 Jun;19(6):1127-36. doi: 10.1002/pro.399.

22.

In Memoriam: Frederic M. Richards (1925-2009).

Rose GD.

Proteins. 2009 May 15;75(3):535-9. doi: 10.1002/prot.22400. No abstract available.

PMID:
19226638
23.

Structure and energetics of the hydrogen-bonded backbone in protein folding.

Bolen DW, Rose GD.

Annu Rev Biochem. 2008;77:339-62. doi: 10.1146/annurev.biochem.77.061306.131357. Review.

PMID:
18518824
24.

Structures, basins, and energies: a deconstruction of the Protein Coil Library.

Perskie LL, Street TO, Rose GD.

Protein Sci. 2008 Jul;17(7):1151-61. doi: 10.1110/ps.035055.108. Epub 2008 Apr 23.

25.

Assessing the solvent-dependent surface area of unfolded proteins using an ensemble model.

Gong H, Rose GD.

Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3321-6. doi: 10.1073/pnas.0712240105. Epub 2008 Feb 27.

26.

Physical-chemical determinants of turn conformations in globular proteins.

Street TO, Fitzkee NC, Perskie LL, Rose GD.

Protein Sci. 2007 Aug;16(8):1720-7.

27.
28.

A backbone-based theory of protein folding.

Rose GD, Fleming PJ, Banavar JR, Maritan A.

Proc Natl Acad Sci U S A. 2006 Nov 7;103(45):16623-33. Epub 2006 Oct 30. Review.

29.

A molecular mechanism for osmolyte-induced protein stability.

Street TO, Bolen DW, Rose GD.

Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):13997-4002. Epub 2006 Sep 12. Erratum in: Proc Natl Acad Sci U S A. 2006 Nov 7;103(45):17064.

30.

Secondary structure determines protein topology.

Fleming PJ, Gong H, Rose GD.

Protein Sci. 2006 Aug;15(8):1829-34. Epub 2006 Jul 5.

31.

The role of introns in repeat protein gene formation.

Street TO, Rose GD, Barrick D.

J Mol Biol. 2006 Jul 7;360(2):258-66. Epub 2006 May 24.

PMID:
16781737
32.

Lifting the lid on helix-capping.

Rose GD.

Nat Chem Biol. 2006 Mar;2(3):123-4. No abstract available.

PMID:
16484999
33.

Rheology of high internal phase emulsions.

Welch CF, Rose GD, Malotky D, Eckersley ST.

Langmuir. 2006 Feb 14;22(4):1544-50.

PMID:
16460072
34.

Hydrogen-bonded turns in proteins: the case for a recount.

Panasik N Jr, Fleming PJ, Rose GD.

Protein Sci. 2005 Nov;14(11):2910-4.

35.

Building native protein conformation from highly approximate backbone torsion angles.

Gong H, Fleming PJ, Rose GD.

Proc Natl Acad Sci U S A. 2005 Nov 8;102(45):16227-32. Epub 2005 Oct 26.

36.

Sterics and solvation winnow accessible conformational space for unfolded proteins.

Fitzkee NC, Rose GD.

J Mol Biol. 2005 Nov 4;353(4):873-87. Epub 2005 Sep 12.

PMID:
16185713
37.

Does secondary structure determine tertiary structure in proteins?

Gong H, Rose GD.

Proteins. 2005 Nov 1;61(2):338-43.

PMID:
16104021
38.

Do all backbone polar groups in proteins form hydrogen bonds?

Fleming PJ, Rose GD.

Protein Sci. 2005 Jul;14(7):1911-7. Epub 2005 Jun 3. Review.

39.
40.

Are proteins made from a limited parts list?

Fitzkee NC, Fleming PJ, Gong H, Panasik N Jr, Street TO, Rose GD.

Trends Biochem Sci. 2005 Feb;30(2):73-80.

PMID:
15691652
41.

The Protein Coil Library: a structural database of nonhelix, nonstrand fragments derived from the PDB.

Fitzkee NC, Fleming PJ, Rose GD.

Proteins. 2005 Mar 1;58(4):852-4.

PMID:
15657933
42.
43.

Reassessing random-coil statistics in unfolded proteins.

Fitzkee NC, Rose GD.

Proc Natl Acad Sci U S A. 2004 Aug 24;101(34):12497-502. Epub 2004 Aug 16.

44.

Polyproline II helix is the preferred conformation for unfolded polyalanine in water.

Mezei M, Fleming PJ, Srinivasan R, Rose GD.

Proteins. 2004 May 15;55(3):502-7.

PMID:
15103614
45.

Ab initio protein folding using LINUS.

Srinivasan R, Fleming PJ, Rose GD.

Methods Enzymol. 2004;383:48-66. Review. No abstract available.

PMID:
15063646
46.
47.

Science education. Educating future scientists.

Sung NS, Gordon JI, Rose GD, Getzoff ED, Kron SJ, Mumford D, Onuchic JN, Scherer NF, Sumners DL, Kopell NJ.

Science. 2003 Sep 12;301(5639):1485. No abstract available.

PMID:
12970550
48.

Local secondary structure content predicts folding rates for simple, two-state proteins.

Gong H, Isom DG, Srinivasan R, Rose GD.

J Mol Biol. 2003 Apr 11;327(5):1149-54.

PMID:
12662937
49.

RNABase: an annotated database of RNA structures.

Murthy VL, Rose GD.

Nucleic Acids Res. 2003 Jan 1;31(1):502-4.

50.

Methinks it is like a folding curve.

Srinivasan R, Rose GD.

Biophys Chem. 2002 Dec 10;101-102:167-71.

PMID:
12487998

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