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Items: 1 to 50 of 1011

1.

Correction for Kennan et al., "Genomic Evidence for a Globally Distributed, Bimodal Population in the Ovine Footrot Pathogen Dichelobacter nodosus".

Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI.

MBio. 2019 Oct 29;10(5). pii: e02560-19. doi: 10.1128/mBio.02560-19. No abstract available.

2.

Perfluoroalkyl substances and changes in bone mineral density: A prospective analysis in the POUNDS-LOST study.

Hu Y, Liu G, Rood J, Liang L, Bray GA, de Jonge L, Coull B, Furtado JD, Qi L, Grandjean P, Sun Q.

Environ Res. 2019 Dec;179(Pt A):108775. doi: 10.1016/j.envres.2019.108775. Epub 2019 Sep 27.

PMID:
31593837
3.

Bioanalysis of EGFRm inhibitor osimertinib, and its glutathione cycle- and desmethyl metabolites by liquid chromatography-tandem mass spectrometry.

Rood JJM, van Haren MJ, Beijnen JH, Sparidans RW.

J Pharm Biomed Anal. 2020 Jan 5;177:112871. doi: 10.1016/j.jpba.2019.112871. Epub 2019 Sep 10.

PMID:
31539712
4.

A diet of U.S. military food rations alters gut microbiota composition and does not increase intestinal permeability.

Karl JP, Armstrong NJ, McClung HL, Player RA, Rood JC, Racicot K, Soares JW, Montain SJ.

J Nutr Biochem. 2019 Oct;72:108217. doi: 10.1016/j.jnutbio.2019.108217. Epub 2019 Jul 30.

5.

Editorial.

Top EM, Traxler B, Rood JI.

Plasmid. 2019 Sep;105:102437. doi: 10.1016/j.plasmid.2019.102437. Epub 2019 Aug 28. No abstract available.

PMID:
31472205
6.

Genetic deficiency of IFNγ reveals IFNγ-independent manifestations of murine Hemophagocytic Lymphohistiocytosis.

Burn TN, Weaver L, Rood JE, Chu N, Bodansky A, Kreiger PA, Behrens EM.

Arthritis Rheumatol. 2019 Aug 9. doi: 10.1002/art.41076. [Epub ahead of print]

PMID:
31400073
7.

Effects of testosterone supplementation on body composition and lower-body muscle function during severe exercise- and diet-induced energy deficit: A proof-of-concept, single centre, randomised, double-blind, controlled trial.

Pasiakos SM, Berryman CE, Karl JP, Lieberman HR, Orr JS, Margolis LM, Caldwell JA, Young AJ, Montano MA, Evans WJ, Vartanian O, Carmichael OT, Gadde KM, Johannsen NM, Beyl RA, Harris MN, Rood JC.

EBioMedicine. 2019 Aug;46:411-422. doi: 10.1016/j.ebiom.2019.07.059. Epub 2019 Jul 27.

8.

Histotoxic Clostridial Infections.

Nagahama M, Takehara M, Rood JI.

Microbiol Spectr. 2018 Aug;6(4). doi: 10.1128/microbiolspec.GPP3-0024-2018.

PMID:
31350831
9.

Bisubstrate Inhibitors of Nicotinamide N-Methyltransferase (NNMT) with Enhanced Activity.

Gao Y, van Haren MJ, Moret EE, Rood JJM, Sartini D, Salvucci A, Emanuelli M, Craveur P, Babault N, Jin J, Martin NI.

J Med Chem. 2019 Jul 25;62(14):6597-6614. doi: 10.1021/acs.jmedchem.9b00413. Epub 2019 Jul 12.

10.

Brain accumulation of osimertinib and its active metabolite AZ5104 is restricted by ABCB1 (P-glycoprotein) and ABCG2 (breast cancer resistance protein).

van Hoppe S, Jamalpoor A, Rood JJM, Wagenaar E, Sparidans RW, Beijnen JH, Schinkel AH.

Pharmacol Res. 2019 Aug;146:104297. doi: 10.1016/j.phrs.2019.104297. Epub 2019 Jun 5.

PMID:
31175939
11.

Clostridial Genetics: Genetic Manipulation of the Pathogenic Clostridia.

Kuehne SA, Rood JI, Lyras D.

Microbiol Spectr. 2019 May;7(3). doi: 10.1128/microbiolspec.GPP3-0040-2018.

PMID:
31172914
12.

Effect of different doses of supervised exercise on food intake, metabolism, and non-exercise physical activity: The E-MECHANIC randomized controlled trial.

Martin CK, Johnson WD, Myers CA, Apolzan JW, Earnest CP, Thomas DM, Rood JC, Johannsen NM, Tudor-Locke C, Harris M, Hsia DS, Church TS.

Am J Clin Nutr. 2019 Sep 1;110(3):583-592. doi: 10.1093/ajcn/nqz054.

PMID:
31172175
13.

Virulence Plasmids of the Pathogenic Clostridia.

Revitt-Mills SA, Vidor CJ, Watts TD, Lyras D, Rood JI, Adams V.

Microbiol Spectr. 2019 May;7(3). doi: 10.1128/microbiolspec.GPP3-0034-2018.

PMID:
31111816
14.

The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution.

Taylor DM, Aronow BJ, Tan K, Bernt K, Salomonis N, Greene CS, Frolova A, Henrickson SE, Wells A, Pei L, Jaiswal JK, Whitsett J, Hamilton KE, MacParland SA, Kelsen J, Heuckeroth RO, Potter SS, Vella LA, Terry NA, Ghanem LR, Kennedy BC, Helbig I, Sullivan KE, Castelo-Soccio L, Kreigstein A, Herse F, Nawijn MC, Koppelman GH, Haendel M, Harris NL, Rokita JL, Zhang Y, Regev A, Rozenblatt-Rosen O, Rood JE, Tickle TL, Vento-Tormo R, Alimohamed S, Lek M, Mar JC, Loomes KM, Barrett DM, Uapinyoying P, Beggs AH, Agrawal PB, Chen YW, Muir AB, Garmire LX, Snapper SB, Nazarian J, Seeholzer SH, Fazelinia H, Singh LN, Faryabi RB, Raman P, Dawany N, Xie HM, Devkota B, Diskin SJ, Anderson SA, Rappaport EF, Peranteau W, Wikenheiser-Brokamp KA, Teichmann S, Wallace D, Peng T, Ding YY, Kim MS, Xing Y, Kong SW, Bönnemann CG, Mandl KD, White PS.

Dev Cell. 2019 Apr 8;49(1):10-29. doi: 10.1016/j.devcel.2019.03.001. Epub 2019 Mar 28. Review.

15.

Determining the extent of maternal-foetal chimerism in cord blood.

Opstelten R, Slot MC, Lardy NM, Lankester AC, Mulder A, Claas FHJ, van Rood JJ, Amsen D.

Sci Rep. 2019 Mar 27;9(1):5247. doi: 10.1038/s41598-019-41733-w.

16.

Increased Human Growth Hormone After Oral Consumption of an Amino Acid Supplement: Results of a Randomized, Placebo-Controlled, Double-Blind, Crossover Study in Healthy Subjects.

Tam CS, Johnson WD, Rood J, Heaton AL, Greenway FL.

Am J Ther. 2019 Mar 8. doi: 10.1097/MJT.0000000000000893. [Epub ahead of print]

PMID:
30893070
17.

Pretreatment Fasting Glucose and Insulin as Determinants of Weight Loss on Diets Varying in Macronutrients and Dietary Fibers-The POUNDS LOST Study.

Hjorth MF, Bray GA, Zohar Y, Urban L, Miketinas DC, Williamson DA, Ryan DH, Rood J, Champagne CM, Sacks FM, Astrup A.

Nutrients. 2019 Mar 11;11(3). pii: E586. doi: 10.3390/nu11030586.

18.

pCP13, a representative of a new family of conjugative toxin plasmids in Clostridium perfringens.

Watts TD, Vidor CJ, Awad MM, Lyras D, Rood JI, Adams V.

Plasmid. 2019 Mar;102:37-45. doi: 10.1016/j.plasmid.2019.02.002. Epub 2019 Feb 18.

PMID:
30790588
19.

Disruption of IL-33 Signaling Limits Early CD8+ T Cell Effector Function Leading to Exhaustion in Murine Hemophagocytic Lymphohistiocytosis.

Rood JE, Burn TN, Neal V, Chu N, Behrens EM.

Front Immunol. 2018 Nov 20;9:2642. doi: 10.3389/fimmu.2018.02642. eCollection 2018.

20.

Sedentary time, physical activity, and adiposity in a longitudinal cohort of nonobese young adults.

Staiano AE, Martin CK, Champagne CM, Rood JC, Katzmarzyk PT.

Am J Clin Nutr. 2018 Nov 1;108(5):946-952. doi: 10.1093/ajcn/nqy191.

21.

Role of body composition and physical activity on permethrin urinary biomarker concentrations while wearing treated military uniforms.

Proctor SP, Scarpaci MM, Maule AL, Heaton KJ, Taylor K, Haven CC, Rood J, Ospina M, Calafat AM.

Toxicol Lett. 2018 Dec 15;299:210-217. doi: 10.1016/j.toxlet.2018.10.001. Epub 2018 Oct 5.

PMID:
30292884
22.

The effect of NIMA matching in adult unrelated mismatched hematopoietic stem cell transplantation - a joint study of the Acute Leukemia Working Party of the EBMT and the CIBMTR.

Pingel J, Wang T, Hagenlocher Y, Hernández-Frederick CJ, Nagler A, Haagenson MD, Fleischhauer K, Hsu KC, Verneris MR, Lee SJ, Mohty M, Polge E, Spellman SR, Schmidt AH, van Rood JJ.

Bone Marrow Transplant. 2019 Jun;54(6):849-857. doi: 10.1038/s41409-018-0345-8. Epub 2018 Oct 2.

PMID:
30279575
23.

P-Glycoprotein (MDR1/ABCB1) Restricts Brain Penetration of the Bruton's Tyrosine Kinase Inhibitor Ibrutinib, While Cytochrome P450-3A (CYP3A) Limits Its Oral Bioavailability.

van Hoppe S, Rood JJM, Buil L, Wagenaar E, Sparidans RW, Beijnen JH, Schinkel AH.

Mol Pharm. 2018 Nov 5;15(11):5124-5134. doi: 10.1021/acs.molpharmaceut.8b00702. Epub 2018 Oct 10.

PMID:
30247919
24.

Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.

Traore DAK, Wisniewski JA, Flanigan SF, Conroy PJ, Panjikar S, Mok YF, Lao C, Griffin MDW, Adams V, Rood JI, Whisstock JC.

Nat Commun. 2018 Sep 13;9(1):3732. doi: 10.1038/s41467-018-06096-2.

25.

Exposure to non-inherited maternal antigens by breastfeeding affects antibody responsiveness.

Schonewille H, van Rood JJ, Verduin EP, van de Watering LMG, Haasnoot GW, Claas FHJ, Oepkes D, Lopriore E, Brand A.

Haematologica. 2019 Feb;104(2):263-268. doi: 10.3324/haematol.2018.199406. Epub 2018 Sep 13.

26.

Associations between the gut microbiota and host responses to high altitude.

Karl JP, Berryman CE, Young AJ, Radcliffe PN, Branck TA, Pantoja-Feliciano IG, Rood JC, Pasiakos SM.

Am J Physiol Gastrointest Liver Physiol. 2018 Dec 1;315(6):G1003-G1015. doi: 10.1152/ajpgi.00253.2018. Epub 2018 Sep 13.

27.

An ethanolic extract of Artemisia scoparia inhibits lipolysis in vivo and has antilipolytic effects on murine adipocytes in vitro.

Boudreau A, Richard AJ, Burrell JA, King WT, Dunn R, Schwarz JM, Ribnicky DM, Rood J, Salbaum JM, Stephens JM.

Am J Physiol Endocrinol Metab. 2018 Nov 1;315(5):E1053-E1061. doi: 10.1152/ajpendo.00177.2018. Epub 2018 Aug 28.

28.

The need for information among patients with hematological malignancies: Psychometric analyses of the 62-item Hematology Information Needs Questionnaire (HINQ-62).

Rood JAJ, Lissenberg-Witte BI, Eeltink C, Stam F, van Zuuren FJ, Zweegman S, Verdonck-de Leeuw IM.

PLoS One. 2018 Aug 9;13(8):e0201699. doi: 10.1371/journal.pone.0201699. eCollection 2018.

29.

Antibiotic resistance plasmids and mobile genetic elements of Clostridium perfringens.

Adams V, Han X, Lyras D, Rood JI.

Plasmid. 2018 Sep;99:32-39. doi: 10.1016/j.plasmid.2018.07.002. Epub 2018 Jul 26. Review.

PMID:
30055188
30.

Associations of Sedentary Time with Energy Expenditure and Anthropometric Measures.

Bonn SE, Rimm EB, Matthews CE, Troiano RP, Bowles HR, Rood J, Barnett JB, Willett WC, Chomistek AK.

Med Sci Sports Exerc. 2018 Dec;50(12):2575-2583. doi: 10.1249/MSS.0000000000001729.

PMID:
30048408
31.

Altitude Acclimatization Alleviates the Hypoxia-Induced Suppression of Exogenous Glucose Oxidation During Steady-State Aerobic Exercise.

Young AJ, Berryman CE, Kenefick RW, Derosier AN, Margolis LM, Wilson MA, Carrigan CT, Murphy NE, Carbone JW, Rood JC, Pasiakos SM.

Front Physiol. 2018 Jul 9;9:830. doi: 10.3389/fphys.2018.00830. eCollection 2018.

32.

LRP10 genetic variants in familial Parkinson's disease and dementia with Lewy bodies: a genome-wide linkage and sequencing study.

Quadri M, Mandemakers W, Grochowska MM, Masius R, Geut H, Fabrizio E, Breedveld GJ, Kuipers D, Minneboo M, Vergouw LJM, Carreras Mascaro A, Yonova-Doing E, Simons E, Zhao T, Di Fonzo AB, Chang HC, Parchi P, Melis M, Correia Guedes L, Criscuolo C, Thomas A, Brouwer RWW, Heijsman D, Ingrassia AMT, Calandra Buonaura G, Rood JP, Capellari S, Rozemuller AJ, Sarchioto M, Fen Chien H, Vanacore N, Olgiati S, Wu-Chou YH, Yeh TH, Boon AJW, Hoogers SE, Ghazvini M, IJpma AS, van IJcken WFJ, Onofrj M, Barone P, Nicholl DJ, Puschmann A, De Mari M, Kievit AJ, Barbosa E, De Michele G, Majoor-Krakauer D, van Swieten JC, de Jong FJ, Ferreira JJ, Cossu G, Lu CS, Meco G, Cortelli P, van de Berg WDJ, Bonifati V; International Parkinsonism Genetics Network.

Lancet Neurol. 2018 Jul;17(7):597-608. doi: 10.1016/S1474-4422(18)30179-0. Epub 2018 Jun 7.

PMID:
29887161
33.

Expansion of the Clostridium perfringens toxin-based typing scheme.

Rood JI, Adams V, Lacey J, Lyras D, McClane BA, Melville SB, Moore RJ, Popoff MR, Sarker MR, Songer JG, Uzal FA, Van Immerseel F.

Anaerobe. 2018 Oct;53:5-10. doi: 10.1016/j.anaerobe.2018.04.011. Epub 2018 Apr 20. Review.

34.

Energy expenditure and substrate oxidation in White and African American young adults without obesity.

Katzmarzyk PT, Most J, Redman LM, Rood J, Ravussin E.

Eur J Clin Nutr. 2018 Jun;72(6):920-922. doi: 10.1038/s41430-018-0202-2. Epub 2018 May 30.

35.

Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens.

Lacey JA, Allnutt TR, Vezina B, Van TTH, Stent T, Han X, Rood JI, Wade B, Keyburn AL, Seemann T, Chen H, Haring V, Johanesen PA, Lyras D, Moore RJ.

BMC Genomics. 2018 May 22;19(1):379. doi: 10.1186/s12864-018-4771-1.

36.

Bioanalysis of ibrutinib, and its dihydrodiol- and glutathione cycle metabolites by liquid chromatography-tandem mass spectrometry.

Rood JJM, Dormans PJA, van Haren MJ, Schellens JHM, Beijnen JH, Sparidans RW.

J Chromatogr B Analyt Technol Biomed Life Sci. 2018 Jul 15;1090:14-21. doi: 10.1016/j.jchromb.2018.05.011. Epub 2018 May 11.

37.

Muscularis macrophage development in the absence of an enteric nervous system.

Avetisyan M, Rood JE, Huerta Lopez S, Sengupta R, Wright-Jin E, Dougherty JD, Behrens EM, Heuckeroth RO.

Proc Natl Acad Sci U S A. 2018 May 1;115(18):4696-4701. doi: 10.1073/pnas.1802490115. Epub 2018 Apr 17.

38.

Concurrent Host-Pathogen Transcriptional Responses in a Clostridium perfringens Murine Myonecrosis Infection.

Low LY, Harrison PF, Gould J, Powell DR, Choo JM, Forster SC, Chapman R, Gearing LJ, Cheung JK, Hertzog P, Rood JI.

MBio. 2018 Mar 27;9(2). pii: e00473-18. doi: 10.1128/mBio.00473-18.

39.

Quantification of cystine in human renal proximal tubule cells using liquid chromatography-tandem mass spectrometry.

Jamalpoor A, Sparidans RW, Pou Casellas C, Rood JJM, Joshi M, Masereeuw R, Janssen MJ.

Biomed Chromatogr. 2018 Aug;32(8):e4238. doi: 10.1002/bmc.4238. Epub 2018 Apr 15.

40.

Perfluoroalkyl substances and changes in body weight and resting metabolic rate in response to weight-loss diets: A prospective study.

Liu G, Dhana K, Furtado JD, Rood J, Zong G, Liang L, Qi L, Bray GA, DeJonge L, Coull B, Grandjean P, Sun Q.

PLoS Med. 2018 Feb 13;15(2):e1002502. doi: 10.1371/journal.pmed.1002502. eCollection 2018 Feb.

41.

Appetite Suppression and Altered Food Preferences Coincide with Changes in Appetite-Mediating Hormones During Energy Deficit at High Altitude, But Are Not Affected by Protein Intake.

Karl JP, Cole RE, Berryman CE, Finlayson G, Radcliffe PN, Kominsky MT, Murphy NE, Carbone JW, Rood JC, Young AJ, Pasiakos SM.

High Alt Med Biol. 2018 Jun;19(2):156-169. doi: 10.1089/ham.2017.0155. Epub 2018 Feb 12.

42.

Plasma fatty acyl-carnitines during 8 weeks of overfeeding: relation to diet energy expenditure and body composition: the PROOF study.

Bray GA, Redman LM, de Jonge L, Rood J, Sutton EF, Smith SR.

Metabolism. 2018 Jun;83:1-10. doi: 10.1016/j.metabol.2018.01.019. Epub 2018 Feb 8.

PMID:
29374510
43.

Clostridium sordellii Pathogenicity Locus Plasmid pCS1-1 Encodes a Novel Clostridial Conjugation Locus.

Vidor CJ, Watts TD, Adams V, Bulach D, Couchman E, Rood JI, Fairweather NF, Awad M, Lyras D.

MBio. 2018 Jan 16;9(1). pii: e01761-17. doi: 10.1128/mBio.01761-17.

44.

Plasma Amino Acids During 8 Weeks of Overfeeding: Relation to Diet Body Composition and Fat Cell Size in the PROOF Study.

Bray GA, Redman LM, de Jonge L, Rood J, Sutton EF, Smith SR.

Obesity (Silver Spring). 2018 Feb;26(2):324-331. doi: 10.1002/oby.22087. Epub 2017 Dec 27.

45.

The incidence of Clostridioides difficile and Clostridium perfringens netF-positive strains in diarrheic dogs.

Diniz AN, Coura FM, Rupnik M, Adams V, Stent TL, Rood JI, de Oliveira CA Jr, Lobato FCF, Silva ROS.

Anaerobe. 2018 Feb;49:58-62. doi: 10.1016/j.anaerobe.2017.12.003. Epub 2017 Dec 20.

PMID:
29274467
46.

Effects of alternate-day fasting or daily calorie restriction on body composition, fat distribution, and circulating adipokines: Secondary analysis of a randomized controlled trial.

Trepanowski JF, Kroeger CM, Barnosky A, Klempel M, Bhutani S, Hoddy KK, Rood J, Ravussin E, Varady KA.

Clin Nutr. 2018 Dec;37(6 Pt A):1871-1878. doi: 10.1016/j.clnu.2017.11.018. Epub 2017 Dec 5.

PMID:
29258678
47.

Vibrational spectroscopy combined with transcriptomic analysis for investigation of bacterial responses towards acid stress.

Hlaing MM, Wood BR, McNaughton D, Rood JI, Fox EM, Augustin MA.

Appl Microbiol Biotechnol. 2018 Jan;102(1):333-343. doi: 10.1007/s00253-017-8561-5. Epub 2017 Oct 29.

PMID:
29082417
48.

BBMerge - Accurate paired shotgun read merging via overlap.

Bushnell B, Rood J, Singer E.

PLoS One. 2017 Oct 26;12(10):e0185056. doi: 10.1371/journal.pone.0185056. eCollection 2017.

49.

Relative Validity of Nutrient Intakes Assessed by Questionnaire, 24-Hour Recalls, and Diet Records as Compared With Urinary Recovery and Plasma Concentration Biomarkers: Findings for Women.

Yuan C, Spiegelman D, Rimm EB, Rosner BA, Stampfer MJ, Barnett JB, Chavarro JE, Rood JC, Harnack LJ, Sampson LK, Willett WC.

Am J Epidemiol. 2018 May 1;187(5):1051-1063. doi: 10.1093/aje/kwx328.

50.

Iron retention in iron-fortified rice and use of iron-fortified rice to treat women with iron deficiency: A pilot study.

Losso JN, Karki N, Muyonga J, Wu Y, Fusilier K, Jacob G, Yu Y, Rood JC, Finley JW, Greenway FL.

BBA Clin. 2017 Sep 8;8:78-83. doi: 10.1016/j.bbacli.2017.09.001. eCollection 2017 Dec.

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