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Items: 1 to 50 of 113

1.

Coupling between taxonomic and functional diversity in protistan coastal communities.

Ramond P, Sourisseau M, Simon N, Romac S, Schmitt S, Rigaut-Jalabert F, Henry N, de Vargas C, Siano R.

Environ Microbiol. 2019 Feb;21(2):730-749. doi: 10.1111/1462-2920.14537. Epub 2019 Feb 15.

PMID:
30672084
2.

Diatom diversity through HTS-metabarcoding in coastal European seas.

Piredda R, Claverie JM, Decelle J, de Vargas C, Dunthorn M, Edvardsen B, Eikrem W, Forster D, Kooistra WHCF, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Romac S, Sarno D, Stoeck T, Zingone A.

Sci Rep. 2018 Dec 24;8(1):18059. doi: 10.1038/s41598-018-36345-9.

3.

Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean.

Decelle J, Carradec Q, Pochon X, Henry N, Romac S, Mahé F, Dunthorn M, Kourlaiev A, Voolstra CR, Wincker P, de Vargas C.

Curr Biol. 2018 Nov 19;28(22):3625-3633.e3. doi: 10.1016/j.cub.2018.09.024. Epub 2018 Nov 8.

PMID:
30416058
4.

An improved primer set and amplification protocol with increased specificity and sensitivity targeting the Symbiodinium ITS2 region.

Hume BCC, Ziegler M, Poulain J, Pochon X, Romac S, Boissin E, de Vargas C, Planes S, Wincker P, Voolstra CR.

PeerJ. 2018 May 23;6:e4816. doi: 10.7717/peerj.4816. eCollection 2018.

5.

Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages.

Morard R, Garet-Delmas MJ, Mahé F, Romac S, Poulain J, Kucera M, de Vargas C.

Sci Rep. 2018 Feb 7;8(1):2539. doi: 10.1038/s41598-018-20833-z.

6.

A global ocean atlas of eukaryotic genes.

Carradec Q, Pelletier E, Da Silva C, Alberti A, Seeleuthner Y, Blanc-Mathieu R, Lima-Mendez G, Rocha F, Tirichine L, Labadie K, Kirilovsky A, Bertrand A, Engelen S, Madoui MA, Méheust R, Poulain J, Romac S, Richter DJ, Yoshikawa G, Dimier C, Kandels-Lewis S, Picheral M, Searson S; Tara Oceans Coordinators, Jaillon O, Aury JM, Karsenti E, Sullivan MB, Sunagawa S, Bork P, Not F, Hingamp P, Raes J, Guidi L, Ogata H, de Vargas C, Iudicone D, Bowler C, Wincker P.

Nat Commun. 2018 Jan 25;9(1):373. doi: 10.1038/s41467-017-02342-1.

7.

The epibiotic life of the cosmopolitan diatom Fragilariopsis doliolus on heterotrophic ciliates in the open ocean.

Vincent FJ, Colin S, Romac S, Scalco E, Bittner L, Garcia Y, Lopes RM, Dolan JR, Zingone A, de Vargas C, Bowler C.

ISME J. 2018 Apr;12(4):1094-1108. doi: 10.1038/s41396-017-0029-1. Epub 2018 Jan 18.

8.

Environmental Sequencing Fills the Gap Between Parasitic Haplosporidians and Free-living Giant Amoebae.

Ward GM, Neuhauser S, Groben R, Ciaghi S, Berney C, Romac S, Bass D.

J Eukaryot Microbiol. 2018 Jan 16. doi: 10.1111/jeu.12501. [Epub ahead of print]

9.

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests.

Mahé F, de Vargas C, Bass D, Czech L, Stamatakis A, Lara E, Singer D, Mayor J, Bunge J, Sernaker S, Siemensmeyer T, Trautmann I, Romac S, Berney C, Kozlov A, Mitchell EAD, Seppey CVW, Egge E, Lentendu G, Wirth R, Trueba G, Dunthorn M.

Nat Ecol Evol. 2017 Mar 20;1(4):91. doi: 10.1038/s41559-017-0091.

PMID:
28812652
10.

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition.

Alberti A, Poulain J, Engelen S, Labadie K, Romac S, Ferrera I, Albini G, Aury JM, Belser C, Bertrand A, Cruaud C, Da Silva C, Dossat C, Gavory F, Gas S, Guy J, Haquelle M, Jacoby E, Jaillon O, Lemainque A, Pelletier E, Samson G, Wessner M; Genoscope Technical Team, Acinas SG, Royo-Llonch M, Cornejo-Castillo FM, Logares R, Fernández-Gómez B, Bowler C, Cochrane G, Amid C, Hoopen PT, De Vargas C, Grimsley N, Desgranges E, Kandels-Lewis S, Ogata H, Poulton N, Sieracki ME, Stepanauskas R, Sullivan MB, Brum JR, Duhaime MB, Poulos BT, Hurwitz BL; Tara Oceans Consortium Coordinators, Pesant S, Karsenti E, Wincker P.

Sci Data. 2017 Aug 1;4:170093. doi: 10.1038/sdata.2017.93.

11.

Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters.

Lopes Dos Santos A, Gourvil P, Tragin M, Noël MH, Decelle J, Romac S, Vaulot D.

ISME J. 2017 Feb;11(2):512-528. doi: 10.1038/ismej.2016.120. Epub 2016 Oct 25.

12.

Benthic protists: the under-charted majority.

Forster D, Dunthorn M, Mahé F, Dolan JR, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Edvardsen B, Egge E, Eikrem W, Gobet A, Kooistra WH, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Richards TA, Santini S, Sarno D, Siano R, Vaulot D, Wincker P, Zingone A, de Vargas C, Stoeck T.

FEMS Microbiol Ecol. 2016 Aug;92(8). pii: fiw120. doi: 10.1093/femsec/fiw120. Epub 2016 Jun 5.

PMID:
27267932
13.

Environmental Sequencing Provides Reasonable Estimates of the Relative Abundance of Specific Picoeukaryotes.

Giner CR, Forn I, Romac S, Logares R, de Vargas C, Massana R.

Appl Environ Microbiol. 2016 Jul 15;82(15):4757-4766. doi: 10.1128/AEM.00560-16. Print 2016 Aug 1.

14.

Genetics of Lafora progressive myoclonic epilepsy: current perspectives.

Kecmanović M, Keckarević-Marković M, Keckarević D, Stevanović G, Jović N, Romac S.

Appl Clin Genet. 2016 May 2;9:49-53. doi: 10.2147/TACG.S57890. eCollection 2016. Review.

15.

Tryptophan Hydroxylase 1 Variant rs1800532 is Associated with Suicide Attempt in Serbian Psychiatric Patients but does not Moderate the Effect of Recent Stressful Life Events.

Karanović J, Ivković M, Jovanović VM, Pantović M, Pavlović-Janković N, Damjanović A, Brajušković G, Romac S, Savić-Pavićević D.

Suicide Life Threat Behav. 2016 Dec;46(6):664-668. doi: 10.1111/sltb.12246. Epub 2016 Apr 2.

PMID:
27037949
16.

The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.).

Mordret S, Romac S, Henry N, Colin S, Carmichael M, Berney C, Audic S, Richter DJ, Pochon X, de Vargas C, Decelle J.

ISME J. 2016 Jun;10(6):1424-36. doi: 10.1038/ismej.2015.211. Epub 2015 Dec 18.

17.

Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages.

Lescot M, Hingamp P, Kojima KK, Villar E, Romac S, Veluchamy A, Boccara M, Jaillon O, Iudicone D, Bowler C, Wincker P, Claverie JM, Ogata H.

ISME J. 2016 May;10(5):1134-46. doi: 10.1038/ismej.2015.192. Epub 2015 Nov 27.

18.

Molecular diversity and distribution of marine fungi across 130 European environmental samples.

Richards TA, Leonard G, Mahé F, Del Campo J, Romac S, Jones MD, Maguire F, Dunthorn M, De Vargas C, Massana R, Chambouvet A.

Proc Biol Sci. 2015 Nov 22;282(1819). pii: 20152243. doi: 10.1098/rspb.2015.2243.

19.

Analysis of PMP22 duplication and deletion using a panel of six dinucleotide tandem repeats.

Gagic M, Markovic MK, Kecmanovic M, Keckarevic D, Mladenovic J, Dackovic J, Milic-Rasic V, Romac S.

Clin Chem Lab Med. 2016 May;54(5):773-80. doi: 10.1515/cclm-2015-0602.

PMID:
26479344
20.

Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes.

Clerissi C, Desdevises Y, Romac S, Audic S, de Vargas C, Acinas SG, Casotti R, Poulain J, Wincker P, Hingamp P, Ogata H, Grimsley N.

Environ Microbiol Rep. 2015 Dec;7(6):979-89. doi: 10.1111/1758-2229.12345.

PMID:
26472079
21.

Association between a Genetic Variant in the hsa-miR-146a Gene and Cancer Risk: An Updated Meta-Analysis.

Nikolić ZZ, Savić Pavićević DL, Vučic NL, Romac SP, Brajušković GN.

Public Health Genomics. 2015;18(5):283-98. doi: 10.1159/000438695. Epub 2015 Sep 3.

PMID:
26337564
22.

Joint effect of the SMN2 and SERF1A genes on childhood-onset types of spinal muscular atrophy in Serbian patients.

Brkušanin M, Kosać A, Jovanović V, Pešović J, Brajušković G, Dimitrijević N, Todorović S, Romac S, Milić Rašić V, Savić-Pavićević D.

J Hum Genet. 2015 Nov;60(11):723-8. doi: 10.1038/jhg.2015.104. Epub 2015 Aug 27.

PMID:
26311540
23.

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing.

Massana R, Gobet A, Audic S, Bass D, Bittner L, Boutte C, Chambouvet A, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Forn I, Forster D, Guillou L, Jaillon O, Kooistra WH, Logares R, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Probert I, Romac S, Richards T, Santini S, Shalchian-Tabrizi K, Siano R, Simon N, Stoeck T, Vaulot D, Zingone A, de Vargas C.

Environ Microbiol. 2015 Oct;17(10):4035-49. doi: 10.1111/1462-2920.12955. Epub 2015 Aug 4.

PMID:
26119494
24.

Assessment of association between genetic variants in microRNA genes hsa-miR-499, hsa-miR-196a2 and hsa-miR-27a and prostate cancer risk in Serbian population.

Nikolić Z, Savić Pavićević D, Vučić N, Cidilko S, Filipović N, Cerović S, Vukotić V, Romac S, Brajušković G.

Exp Mol Pathol. 2015 Aug;99(1):145-50. doi: 10.1016/j.yexmp.2015.06.009. Epub 2015 Jun 22.

PMID:
26112096
25.

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean.

de Vargas C, Audic S, Henry N, Decelle J, Mahé F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horák A, Jaillon O, Lima-Mendez G, Lukeš J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels-Lewis S; Tara Oceans Coordinators, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E.

Science. 2015 May 22;348(6237):1261605. doi: 10.1126/science.1261605.

26.

Intellectual ability in the duchenne muscular dystrophy and dystrophin gene mutation location.

Milic Rasic V, Vojinovic D, Pesovic J, Mijalkovic G, Lukic V, Mladenovic J, Kosac A, Novakovic I, Maksimovic N, Romac S, Todorovic S, Savic Pavicevic D.

Balkan J Med Genet. 2015 Apr 10;17(2):25-35. doi: 10.2478/bjmg-2014-0071. eCollection 2014 Dec.

27.

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms.

Forster D, Bittner L, Karkar S, Dunthorn M, Romac S, Audic S, Lopez P, Stoeck T, Bapteste E.

BMC Biol. 2015 Feb 24;13:16. doi: 10.1186/s12915-015-0125-5.

28.

PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy.

Decelle J, Romac S, Stern RF, Bendif el M, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F, Gourvil P, Dos Santos AL, Probert I, Vaulot D, de Vargas C, Christen R.

Mol Ecol Resour. 2015 Nov;15(6):1435-45. doi: 10.1111/1755-0998.12401. Epub 2015 Apr 6.

PMID:
25740460
29.

Joint effect of ADARB1 gene, HTR2C gene and stressful life events on suicide attempt risk in patients with major psychiatric disorders.

Karanović J, Šviković S, Pantović M, Durica S, Brajušković G, Damjanović A, Jovanović V, Ivković M, Romac S, Savić Pavićević D.

World J Biol Psychiatry. 2015 Jun;16(4):261-71. doi: 10.3109/15622975.2014.1000374. Epub 2015 Mar 2.

PMID:
25732952
30.

Clinical and genetic data on Lafora disease patients of Serbian/Montenegrin origin.

Kecmanović M, Jović N, Keckarević-Marković M, Keckarević D, Stevanović G, Ignjatović P, Romac S.

Clin Genet. 2016 Jan;89(1):104-8. doi: 10.1111/cge.12570. Epub 2015 Mar 19.

PMID:
25683376
31.

Genetic variants within endothelial nitric oxide synthase gene and prostate cancer: a meta-analysis.

Nikolić ZZ, Pavićević DLj, Romac SP, Brajušković GN.

Clin Transl Sci. 2015 Feb;8(1):23-31. doi: 10.1111/cts.12203. Epub 2014 Aug 27.

32.

Assessment of species diversity and distribution of an ancient diatom lineage using a DNA metabarcoding approach.

Nanjappa D, Audic S, Romac S, Kooistra WH, Zingone A.

PLoS One. 2014 Aug 18;9(8):e103810. doi: 10.1371/journal.pone.0103810. eCollection 2014.

33.

Intracellular diversity of the V4 and V9 regions of the 18S rRNA in marine protists (radiolarians) assessed by high-throughput sequencing.

Decelle J, Romac S, Sasaki E, Not F, Mahé F.

PLoS One. 2014 Aug 4;9(8):e104297. doi: 10.1371/journal.pone.0104297. eCollection 2014.

34.

Association between genetic variant in hsa-miR-146a gene and prostate cancer progression: evidence from Serbian population.

Nikolić ZZ, Savić Pavićević DLj, Vukotić VD, Tomović SM, Cerović SJ, Filipović N, Romac SP, Brajušković GN.

Cancer Causes Control. 2014 Nov;25(11):1571-5. doi: 10.1007/s10552-014-0452-9. Epub 2014 Aug 2.

PMID:
25084752
35.

Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments.

Chambouvet A, Berney C, Romac S, Audic S, Maguire F, De Vargas C, Richards TA.

BMC Microbiol. 2014 Apr 29;14:110. doi: 10.1186/1471-2180-14-110.

36.

Patterns of rare and abundant marine microbial eukaryotes.

Logares R, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Dolan JR, Dunthorn M, Edvardsen B, Gobet A, Kooistra WH, Mahé F, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Stoeck T, Santini S, Siano R, Wincker P, Zingone A, Richards TA, de Vargas C, Massana R.

Curr Biol. 2014 Apr 14;24(8):813-21. doi: 10.1016/j.cub.2014.02.050. Epub 2014 Apr 3.

37.

Genetic delineation between and within the widespread coccolithophore morpho-species Emiliania huxleyi and Gephyrocapsa oceanica (Haptophyta).

Bendif el M, Probert I, Carmichael M, Romac S, Hagino K, de Vargas C.

J Phycol. 2014 Feb;50(1):140-8. doi: 10.1111/jpy.12147. Epub 2014 Jan 13.

PMID:
26988015
38.

Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context.

Dunthorn M, Otto J, Berger SA, Stamatakis A, Mahé F, Romac S, de Vargas C, Audic S; Biomarks Consortium, Stock A, Kauff F, Stoeck T.

Mol Biol Evol. 2014 Apr;31(4):993-1009. doi: 10.1093/molbev/msu055. Epub 2014 Jan 27.

PMID:
24473288
39.

The 60th anniversary of the discovery of DNA secondary structure.

Brajusković G, Pavicćević DS, Romac S.

Vojnosanit Pregl. 2013 Dec;70(12):1165-70. No abstract available.

PMID:
24450265
40.

Assessment of association between common variants at 17q12 and prostate cancer risk-evidence from Serbian population and meta--analysis.

Nikolić ZZ, Branković AS, Savić-Pavićević DL, Preković SM, Vukotić VD, Cerović SJ, Filipović NN, Tomović SM, Romac SP, Brajušković GN.

Clin Transl Sci. 2014 Aug;7(4):307-13. doi: 10.1111/cts.12130. Epub 2014 Jan 14.

41.

Endothelial nitric oxide synthase gene polymorphisms and prostate cancer risk in Serbian population.

Branković A, Brajušković G, Nikolić Z, Vukotić V, Cerović S, Savić-Pavićević D, Romac S.

Int J Exp Pathol. 2013 Dec;94(6):355-61. doi: 10.1111/iep.12045. Epub 2013 Sep 2.

42.

A shared haplotype indicates a founder event in Unverricht-Lundborg disease patients from Serbia.

Kecmanović M, Ristić AJ, Ercegovac M, Keckarević-Marković M, Keckarević D, Sokić D, Romac S.

Int J Neurosci. 2014 Feb;124(2):102-9. doi: 10.3109/00207454.2013.828723. Epub 2013 Sep 12.

PMID:
23883076
43.

Vampires in the oceans: predatory cercozoan amoebae in marine habitats.

Berney C, Romac S, Mahé F, Santini S, Siano R, Bass D.

ISME J. 2013 Dec;7(12):2387-99. doi: 10.1038/ismej.2013.116. Epub 2013 Jul 18.

44.

The coexistence of myasthenia gravis and myotonic dystrophy type 2 in a single patient.

Nikolic A, Rakocevic Stojanovic V, Romac S, Savic D, Basta I, Lavrnic D.

J Clin Neurol. 2013 Apr;9(2):130-2. doi: 10.3988/jcn.2013.9.2.130. Epub 2013 Apr 4.

45.

Molecular genetics and genetic testing in myotonic dystrophy type 1.

Savić Pavićević D, Miladinović J, Brkušanin M, Šviković S, Djurica S, Brajušković G, Romac S.

Biomed Res Int. 2013;2013:391821. doi: 10.1155/2013/391821. Epub 2013 Mar 18. Review.

46.

Common variants at 8q24 are associated with prostate cancer risk in Serbian population.

Branković AS, Brajušković GN, Mirčetić JD, Nikolić ZZ, Kalaba PB, Vukotić VD, Tomović SM, Cerović SJ, Radojičić ZA, Savić-Pavićević DL, Romac SP.

Pathol Oncol Res. 2013 Jul;19(3):559-69. doi: 10.1007/s12253-013-9617-1. Epub 2013 Mar 28.

PMID:
23532531
47.

Lafora disease: severe phenotype associated with homozygous deletion of the NHLRC1 gene.

Kecmanović M, Jović N, Cukić M, Keckarević-Marković M, Keckarević D, Stevanović G, Romac S.

J Neurol Sci. 2013 Feb 15;325(1-2):170-3. doi: 10.1016/j.jns.2012.12.006. Epub 2013 Jan 11. Review.

PMID:
23317923
48.

Assessment of possible association between rs3787016 and prostate cancer risk in Serbian population.

Nikolić ZZ, Brajušković GN, Pavićević DLj, Kojić AS, Vukotić VD, Tomović SM, Cerović SJ, Filipović V, Mišljenović D, Romac SP.

Int J Clin Exp Med. 2013;6(1):57-66. Epub 2012 Nov 18.

49.

Reticulamoeba is a long-branched Granofilosean (Cercozoa) that is missing from sequence databases.

Bass D, Yabuki A, Santini S, Romac S, Berney C.

PLoS One. 2012;7(12):e49090. doi: 10.1371/journal.pone.0049090. Epub 2012 Dec 4.

50.

An algorithm for genetic testing of Serbian patients with demyelinating Charcot-Marie-Tooth.

Keckarevic Markovic MP, Dackovic J, Mladenovic J, Milic-Rasic V, Kecmanovic M, Keckarevic D, Romac S.

Genet Test Mol Biomarkers. 2013 Jan;17(1):85-7. doi: 10.1089/gtmb.2012.0238. Epub 2012 Nov 19.

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