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Items: 1 to 50 of 107

1.

RNA sequencing and Prediction Tools for Circular RNAs Analysis.

López-Jiménez E, Rojas AM, Andrés-León E.

Adv Exp Med Biol. 2018;1087:17-33. doi: 10.1007/978-981-13-1426-1_2.

PMID:
30259354
2.

miARma-Seq, a comprehensive pipeline for the simultaneous study and integration of miRNA and mRNA expression data.

Andrés-León E, Rojas AM.

Methods. 2018 Sep 22. pii: S1046-2023(18)30051-3. doi: 10.1016/j.ymeth.2018.09.002. [Epub ahead of print] Review.

PMID:
30253202
3.

Robust increase of leaf size by Arabidopsis thaliana GRF3-like transcription factors under different growth conditions.

Beltramino M, Ercoli MF, Debernardi JM, Goldy C, Rojas AML, Nota F, Alvarez ME, Vercruyssen L, Inzé D, Palatnik JF, Rodriguez RE.

Sci Rep. 2018 Sep 7;8(1):13447. doi: 10.1038/s41598-018-29859-9.

4.

Plum (Prunus salicina) peel and pulp microparticles as natural antioxidant additives in breast chicken patties.

Basanta MF, Rizzo SA, Szerman N, Vaudagna SR, Descalzo AM, Gerschenson LN, Pérez CD, Rojas AM.

Food Res Int. 2018 Apr;106:1086-1094. doi: 10.1016/j.foodres.2017.12.011. Epub 2017 Dec 14.

PMID:
29579902
5.

EXD2 governs germ stem cell homeostasis and lifespan by promoting mitoribosome integrity and translation.

Silva J, Aivio S, Knobel PA, Bailey LJ, Casali A, Vinaixa M, Garcia-Cao I, Coyaud É, Jourdain AA, Pérez-Ferreros P, Rojas AM, Antolin-Fontes A, Samino-Gené S, Raught B, González-Reyes A, Ribas de Pouplana L, Doherty AJ, Yanes O, Stracker TH.

Nat Cell Biol. 2018 Feb;20(2):162-174. doi: 10.1038/s41556-017-0016-9. Epub 2018 Jan 15.

6.

Corrigendum: miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis.

Andrés-León E, Núñez-Torres R, Rojas AM.

Sci Rep. 2018 Jan 8;8:46928. doi: 10.1038/srep46928.

7.

Evolutionary Footprints Reveal Insights into Plant MicroRNA Biogenesis.

Chorostecki U, Moro B, Rojas AML, Debernardi JM, Schapire AL, Notredame C, Palatnik JF.

Plant Cell. 2017 Jun;29(6):1248-1261. doi: 10.1105/tpc.17.00272. Epub 2017 May 26.

8.

Novel miRNA-mRNA interactions conserved in essential cancer pathways.

Andrés-León E, Cases I, Alonso S, Rojas AM.

Sci Rep. 2017 Apr 7;7:46101. doi: 10.1038/srep46101.

9.

Pectin-based composite film: Effect of corn husk fiber concentration on their properties.

Bernhardt DC, Pérez CD, Fissore EN, De'Nobili MD, Rojas AM.

Carbohydr Polym. 2017 May 15;164:13-22. doi: 10.1016/j.carbpol.2017.01.031. Epub 2017 Jan 11.

PMID:
28325309
10.

A non-canonical mismatch repair pathway in prokaryotes.

Castañeda-García A, Prieto AI, Rodríguez-Beltrán J, Alonso N, Cantillon D, Costas C, Pérez-Lago L, Zegeye ED, Herranz M, Plociński P, Tonjum T, García de Viedma D, Paget M, Waddell SJ, Rojas AM, Doherty AJ, Blázquez J.

Nat Commun. 2017 Jan 27;8:14246. doi: 10.1038/ncomms14246.

11.

A Randomized, Double-Blind, Placebo-Controlled Study of Neuromuscular Electrical Stimulation (NMES) use for Recovery after Elective Total Hip Replacement Surgery.

Castellano JJ, Rojas AM, Karia R, Hunter T, Slover J, Moroz A.

Bull Hosp Jt Dis (2013). 2016 Nov;74(4):275-281.

PMID:
27815950
12.

DDRprot: a database of DNA damage response-related proteins.

Andrés-León E, Cases I, Arcas A, Rojas AM.

Database (Oxford). 2016 Aug 29;2016. pii: baw123. doi: 10.1093/database/baw123. Print 2016.

13.

Dominant-negative mutation p.Arg324Thr in KCNA1 impairs Kv1.1 channel function in episodic ataxia.

Tristán-Clavijo E, Scholl FG, Macaya A, Iglesias G, Rojas AM, Lucas M, Castellano A, Martinez-Mir A.

Mov Disord. 2016 Nov;31(11):1743-1748. doi: 10.1002/mds.26737. Epub 2016 Aug 1.

PMID:
27477325
14.

Control of cell proliferation and elongation by miR396.

Ercoli MF, Rojas AM, Debernardi JM, Palatnik JF, Rodriguez RE.

Plant Signal Behav. 2016 Jun 2;11(6):e1184809. doi: 10.1080/15592324.2016.1184809.

15.

miARma-Seq: a comprehensive tool for miRNA, mRNA and circRNA analysis.

Andrés-León E, Núñez-Torres R, Rojas AM.

Sci Rep. 2016 May 11;6:25749. doi: 10.1038/srep25749. Erratum in: Sci Rep. 2018 Jan 08;8:46928.

16.

GEMC1 is a critical regulator of multiciliated cell differentiation.

Terré B, Piergiovanni G, Segura-Bayona S, Gil-Gómez G, Youssef SA, Attolini CS, Wilsch-Bräuninger M, Jung C, Rojas AM, Marjanović M, Knobel PA, Palenzuela L, López-Rovira T, Forrow S, Huttner WB, Valverde MA, de Bruin A, Costanzo V, Stracker TH.

EMBO J. 2016 May 2;35(9):942-60. doi: 10.15252/embj.201592821. Epub 2016 Mar 1.

17.

Carrot fiber (CF) composite films for antioxidant preservation: Particle size effect.

Idrovo Encalada AM, Basanta MF, Fissore EN, De'Nobili MD, Rojas AM.

Carbohydr Polym. 2016 Jan 20;136:1041-51. doi: 10.1016/j.carbpol.2015.09.109. Epub 2015 Oct 9.

PMID:
26572445
18.

Protease and hemicellulase assisted extraction of dietary fiber from wastes of Cynara cardunculus.

Domingo CS, Soria M, Rojas AM, Fissore EN, Gerschenson LN.

Int J Mol Sci. 2015 Mar 16;16(3):6057-75. doi: 10.3390/ijms16036057.

19.

Type I phosphatidylinositol 4-phosphate 5-kinase homo- and heterodimerization determines its membrane localization and activity.

Lacalle RA, de Karam JC, Martínez-Muñoz L, Artetxe I, Peregil RM, Sot J, Rojas AM, Goñi FM, Mellado M, Mañes S.

FASEB J. 2015 Jun;29(6):2371-85. doi: 10.1096/fj.14-264606. Epub 2015 Feb 24.

PMID:
25713054
20.

[The educational change in medical schools].

Castillo M, Hawes G, Castillo S, Romero L, Rojas AM, Espinoza M, Oyarzo S.

Rev Med Chil. 2014 Aug;142(8):1056-60. doi: 10.4067/S0034-98872014000800013. Spanish.

21.

The pseudo GTPase CENP-M drives human kinetochore assembly.

Basilico F, Maffini S, Weir JR, Prumbaum D, Rojas AM, Zimniak T, De Antoni A, Jeganathan S, Voss B, van Gerwen S, Krenn V, Massimiliano L, Valencia A, Vetter IR, Herzog F, Raunser S, Pasqualato S, Musacchio A.

Elife. 2014 Jul 8;3:e02978. doi: 10.7554/eLife.02978.

22.

Chemical and rheological characterization of the carrageenans from Hypnea musciformis (Wulfen) Lamoroux.

Cosenza VA, Navarro DA, Fissore EN, Rojas AM, Stortz CA.

Carbohydr Polym. 2014 Feb 15;102:780-9. doi: 10.1016/j.carbpol.2013.10.090. Epub 2013 Nov 6.

PMID:
24507347
23.

Upgrading of residues of bracts, stems and hearts of Cynara cardunculus L. var. scolymus to functional fractions enriched in soluble fiber.

Fissore EN, Santo Domingo C, Pujol CA, Damonte EB, Rojas AM, Gerschenson LN.

Food Funct. 2014 Mar;5(3):463-70. doi: 10.1039/c3fo60561b.

PMID:
24481481
24.

Emergence and evolutionary analysis of the human DDR network: implications in comparative genomics and downstream analyses.

Arcas A, Fernández-Capetillo O, Cases I, Rojas AM.

Mol Biol Evol. 2014 Apr;31(4):940-61. doi: 10.1093/molbev/msu046. Epub 2014 Jan 16.

25.

Pre-treatment haemoglobin and peripheral blood lymphocyte count as independent predictors of outcome in carcinoma of cervix.

Hoskin PJ, Rojas AM, Peiris SN, Mullassery V, Chong IY.

Clin Oncol (R Coll Radiol). 2014 Apr;26(4):179-84. doi: 10.1016/j.clon.2013.11.023. Epub 2014 Jan 15.

PMID:
24439272
26.

Dosimetric predictors of biochemical control of prostate cancer in patients randomised to external beam radiotherapy with a boost of high dose rate brachytherapy.

Hoskin PJ, Rojas AM, Ostler PJ, Hughes R, Bryant L, Lowe GJ.

Radiother Oncol. 2014 Jan;110(1):110-3. doi: 10.1016/j.radonc.2013.08.043. Epub 2013 Oct 4.

PMID:
24100150
27.

Serine/threonine kinases and E2-ubiquitin conjugating enzymes in Planctomycetes: unexpected findings.

Arcas A, Cases I, Rojas AM.

Antonie Van Leeuwenhoek. 2013 Oct;104(4):509-20. doi: 10.1007/s10482-013-9993-2. Epub 2013 Aug 6.

PMID:
23918348
28.

A common structural scaffold in CTD phosphatases that supports distinct catalytic mechanisms.

Pons T, Paramonov I, Boullosa C, Ibáñez K, Rojas AM, Valencia A.

Proteins. 2014 Jan;82(1):103-18. doi: 10.1002/prot.24376. Epub 2013 Sep 10.

PMID:
23900790
29.

Two novel missense mutations in iron transport protein transferrin causing hypochromic microcytic anaemia and haemosiderosis: molecular characterization and structural implications.

Athiyarath R, Arora N, Fuster F, Schwarzenbacher R, Ahmed R, George B, Chandy M, Srivastava A, Rojas AM, Sanchez M, Edison ES.

Br J Haematol. 2013 Nov;163(3):404-7. doi: 10.1111/bjh.12487. Epub 2013 Jul 24. No abstract available.

PMID:
23888904
30.

A 26-gene hypoxia signature predicts benefit from hypoxia-modifying therapy in laryngeal cancer but not bladder cancer.

Eustace A, Mani N, Span PN, Irlam JJ, Taylor J, Betts GN, Denley H, Miller CJ, Homer JJ, Rojas AM, Hoskin PJ, Buffa FM, Harris AL, Kaanders JH, West CM.

Clin Cancer Res. 2013 Sep 1;19(17):4879-88. doi: 10.1158/1078-0432.CCR-13-0542. Epub 2013 Jul 2.

31.

Necrosis predicts benefit from hypoxia-modifying therapy in patients with high risk bladder cancer enrolled in a phase III randomised trial.

Eustace A, Irlam JJ, Taylor J, Denley H, Agrawal S, Choudhury A, Ryder D, Ord JJ, Harris AL, Rojas AM, Hoskin PJ, West CM.

Radiother Oncol. 2013 Jul;108(1):40-7. doi: 10.1016/j.radonc.2013.05.017. Epub 2013 Jun 14.

32.

Performance of alginate films for retention of L-(+)-ascorbic acid.

De'Nobili MD, Curto LM, Delfino JM, Soria M, Fissore EN, Rojas AM.

Int J Pharm. 2013 Jun 25;450(1-2):95-103. doi: 10.1016/j.ijpharm.2013.04.027. Epub 2013 Apr 22.

PMID:
23618957
33.

A proteomic characterization of factors enriched at nascent DNA molecules.

Lopez-Contreras AJ, Ruppen I, Nieto-Soler M, Murga M, Rodriguez-Acebes S, Remeseiro S, Rodrigo-Perez S, Rojas AM, Mendez J, Muñoz J, Fernandez-Capetillo O.

Cell Rep. 2013 Apr 25;3(4):1105-16. doi: 10.1016/j.celrep.2013.03.009. Epub 2013 Mar 28.

34.

Quality of life after radical radiotherapy for prostate cancer: longitudinal study from a randomised trial of external beam radiotherapy alone or in combination with high dose rate brachytherapy.

Hoskin PJ, Rojas AM, Ostler PJ, Hughes R, Lowe GJ, Bryant L.

Clin Oncol (R Coll Radiol). 2013 May;25(5):321-7. doi: 10.1016/j.clon.2013.01.001. Epub 2013 Feb 4.

PMID:
23384799
35.

Chemical and functional properties of cell wall polymers from two cherry varieties at two developmental stages.

Basanta MF, de Escalada Plá MF, Stortz CA, Rojas AM.

Carbohydr Polym. 2013 Jan 30;92(1):830-41. doi: 10.1016/j.carbpol.2012.09.091. Epub 2012 Oct 8.

PMID:
23218373
36.

Public health interventions: reaching Latino adolescents via short message service and social media.

Vyas AN, Landry M, Schnider M, Rojas AM, Wood SF.

J Med Internet Res. 2012 Jul 12;14(4):e99. doi: 10.2196/jmir.2178.

37.

Effect of extraction time and temperature on the characteristics of loosely bound pectins from Japanese plum.

Basanta MF, Ponce NM, Rojas AM, Stortz CA.

Carbohydr Polym. 2012 Jun 5;89(1):230-5. doi: 10.1016/j.carbpol.2012.03.001. Epub 2012 Mar 7.

PMID:
24750628
38.

Hydrolytic and oxidative stability of L-(+)-ascorbic acid supported in pectin films: influence of the macromolecular structure and calcium presence.

Pérez CD, Fissore EN, Gerschenson LN, Cameron RG, Rojas AM.

J Agric Food Chem. 2012 May 30;60(21):5414-22. doi: 10.1021/jf205132m. Epub 2012 May 16.

PMID:
22537342
39.

Uncovering the molecular machinery of the human spindle--an integration of wet and dry systems biology.

Rojas AM, Santamaria A, Malik R, Jensen TS, Körner R, Morilla I, de Juan D, Krallinger M, Hansen DA, Hoffmann R, Lees J, Reid A, Yeats C, Wehner A, Elowe S, Clegg AB, Brunak S, Nigg EA, Orengo C, Valencia A, Ranea JA.

PLoS One. 2012;7(3):e31813. doi: 10.1371/journal.pone.0031813. Epub 2012 Mar 9.

40.

Randomised trial of external beam radiotherapy alone or combined with high-dose-rate brachytherapy boost for localised prostate cancer.

Hoskin PJ, Rojas AM, Bownes PJ, Lowe GJ, Ostler PJ, Bryant L.

Radiother Oncol. 2012 May;103(2):217-22. doi: 10.1016/j.radonc.2012.01.007. Epub 2012 Feb 16.

41.

The Ras protein superfamily: evolutionary tree and role of conserved amino acids.

Rojas AM, Fuentes G, Rausell A, Valencia A.

J Cell Biol. 2012 Jan 23;196(2):189-201. doi: 10.1083/jcb.201103008. Review. Erratum in: J Cell Biol. 2012 Feb 20;196(4):545.

42.

Isolation of pectin-enriched products from red beet (Beta vulgaris L. var. conditiva) wastes: composition and functional properties.

Fissore EN, Ponce NM, Matkovic L, Stortz CA, Rojas AM, Gerschenson LN.

Food Sci Technol Int. 2011 Dec;17(6):517-27. doi: 10.1177/1082013211399674. Epub 2011 Nov 2.

PMID:
22049159
43.

Comparative transcriptome analysis of human trophectoderm and embryonic stem cell-derived trophoblasts reveal key participants in early implantation.

Aghajanova L, Shen S, Rojas AM, Fisher SJ, Irwin JC, Giudice LC.

Biol Reprod. 2012 Jan 16;86(1):1-21. doi: 10.1095/biolreprod.111.092775. Print 2012 Jan.

PMID:
21865555
44.

Sumoylation regulates nuclear localization of repressor DREAM.

Palczewska M, Casafont I, Ghimire K, Rojas AM, Valencia A, Lafarga M, Mellström B, Naranjo JR.

Biochim Biophys Acta. 2011 May;1813(5):1050-8. doi: 10.1016/j.bbamcr.2010.11.001. Epub 2010 Nov 9.

45.

Radiotherapy with concurrent carbogen and nicotinamide in bladder carcinoma.

Hoskin PJ, Rojas AM, Bentzen SM, Saunders MI.

J Clin Oncol. 2010 Nov 20;28(33):4912-8. doi: 10.1200/JCO.2010.28.4950. Epub 2010 Oct 18.

PMID:
20956620
46.

An isoform-specific PDZ-binding motif targets type I PIP5 kinase beta to the uropod and controls polarization of neutrophil-like HL60 cells.

Mañes S, Fuentes G, Peregil RM, Rojas AM, Lacalle RA.

FASEB J. 2010 Sep;24(9):3381-92. doi: 10.1096/fj.09-153106. Epub 2010 May 4.

PMID:
20442317
47.

Mature results of a randomized trial of accelerated hyperfractionated versus conventional radiotherapy in head-and-neck cancer.

Saunders MI, Rojas AM, Parmar MK, Dische S; CHART Trial Collaborators.

Int J Radiat Oncol Biol Phys. 2010 May 1;77(1):3-8. doi: 10.1016/j.ijrobp.2009.04.082.

PMID:
20394851
48.

Characterization of acid-extracted pectin-enriched products obtained from red beet (Beta vulgaris L. var. conditiva) and butternut (Cucurbita moschata Duch ex Poiret).

Fissore EN, Ponce NM, de Escalada Pla M, Stortz CA, Rojas AM, Gerschenson LN.

J Agric Food Chem. 2010 Mar 24;58(6):3793-800. doi: 10.1021/jf903844b.

PMID:
20178319
49.

Homocysteine modifies fibrin clot deformability: another possible explanation of harm.

Rojas AM, Kordich L, Lauricella AM.

Biorheology. 2009;46(5):379-87. doi: 10.3233/BIR-2009-0459.

PMID:
19940354
50.

Occupational health crossing borders part 2: Comparison of 18 occupational health systems across the globe.

Radon K, Ehrenstein V, Nowak D, Bigaignon-Cantineau J, Gonzalez M, Vellore AD, Zamora VE, Gupta N, Huang L, Kandkers S, Lanza AM, Garcia LP, Patsis KS, Rojas AM, Shoma A, Verbeek J; Occupational Health Crossing Borders Summer School Team.

Am J Ind Med. 2010 Jan;53(1):55-63. doi: 10.1002/ajim.20771.

PMID:
19921705

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