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Items: 25

1.

Pyomelanin-producing Pseudomonas aeruginosa selected during chronic infections have a large chromosomal deletion which confers resistance to pyocins.

Hocquet D, Petitjean M, Rohmer L, Valot B, Kulasekara HD, Bedel E, Bertrand X, Plésiat P, Köhler T, Pantel A, Jacobs MA, Hoffman LR, Miller SI.

Environ Microbiol. 2016 Oct;18(10):3482-3493. doi: 10.1111/1462-2920.13336. Epub 2016 Jun 2.

2.

Genomic Analysis of Salmonella enterica Serovar Typhimurium Characterizes Strain Diversity for Recent U.S. Salmonellosis Cases and Identifies Mutations Linked to Loss of Fitness under Nitrosative and Oxidative Stress.

Hayden HS, Matamouros S, Hager KR, Brittnacher MJ, Rohmer L, Radey MC, Weiss EJ, Kim KB, Jacobs MA, Sims-Day EH, Yue M, Zaidi MB, Schifferli DM, Manning SD, Walson JL, Miller SI.

MBio. 2016 Mar 8;7(2):e00154. doi: 10.1128/mBio.00154-16.

3.

Minimally destructive sampling of type specimens of Pyropia (Bangiales, Rhodophyta) recovers complete plastid and mitochondrial genomes.

Hughey JR, Gabrielson PW, Rohmer L, Tortolani J, Silva M, Miller KA, Young JD, Martell C, Ruediger E.

Sci Rep. 2014 Jun 4;4:5113. doi: 10.1038/srep05113.

4.

Genomic analysis of the emergence of 20th century epidemic dysentery.

Rohmer L, Jacobs MA, Brittnacher MJ, Fong C, Hayden HS, Hocquet D, Weiss EJ, Radey M, Germani Y, Talukder KA, Hager AJ, Kemner JM, Sims-Day EH, Matamouros S, Hager KR, Miller SI.

BMC Genomics. 2014 May 10;15:355. doi: 10.1186/1471-2164-15-355.

5.

Comparative Genomic Analysis of Two Multidrug-Resistant Clinical Isolates of ST395 Epidemic Strain of Pseudomonas aeruginosa Obtained 12 Years Apart.

Valot B, Rohmer L, Jacobs MA, Miller SI, Bertrand X, Hocquet D.

Genome Announc. 2014 May 29;2(3). pii: e00515-14. doi: 10.1128/genomeA.00515-14.

6.

Escherichia coli dysbiosis correlates with gastrointestinal dysfunction in children with cystic fibrosis.

Hoffman LR, Pope CE, Hayden HS, Heltshe S, Levy R, McNamara S, Jacobs MA, Rohmer L, Radey M, Ramsey BW, Brittnacher MJ, Borenstein E, Miller SI.

Clin Infect Dis. 2014 Feb;58(3):396-9. doi: 10.1093/cid/cit715. Epub 2013 Oct 30.

7.

Genome sequence of Francisella tularensis subspecies holarctica strain FSC200, isolated from a child with tularemia.

Svensson K, Sjödin A, Byström M, Granberg M, Brittnacher MJ, Rohmer L, Jacobs MA, Sims-Day EH, Levy R, Zhou Y, Hayden HS, Lim R, Chang J, Guenthener D, Kang A, Haugen E, Gillett W, Kaul R, Forsman M, Larsson P, Johansson A.

J Bacteriol. 2012 Dec;194(24):6965-6. doi: 10.1128/JB.01040-12.

8.

Evolution of Burkholderia pseudomallei in recurrent melioidosis.

Hayden HS, Lim R, Brittnacher MJ, Sims EH, Ramage ER, Fong C, Wu Z, Crist E, Chang J, Zhou Y, Radey M, Rohmer L, Haugen E, Gillett W, Wuthiekanun V, Peacock SJ, Kaul R, Miller SI, Manoil C, Jacobs MA.

PLoS One. 2012;7(5):e36507. doi: 10.1371/journal.pone.0036507. Epub 2012 May 15.

9.

PGAT: a multistrain analysis resource for microbial genomes.

Brittnacher MJ, Fong C, Hayden HS, Jacobs MA, Radey M, Rohmer L.

Bioinformatics. 2011 Sep 1;27(17):2429-30. doi: 10.1093/bioinformatics/btr418. Epub 2011 Jul 15.

10.

Are pathogenic bacteria just looking for food? Metabolism and microbial pathogenesis.

Rohmer L, Hocquet D, Miller SI.

Trends Microbiol. 2011 Jul;19(7):341-8. doi: 10.1016/j.tim.2011.04.003. Epub 2011 May 18. Review.

11.

Burkholderia type VI secretion systems have distinct roles in eukaryotic and bacterial cell interactions.

Schwarz S, West TE, Boyer F, Chiang WC, Carl MA, Hood RD, Rohmer L, Tolker-Nielsen T, Skerrett SJ, Mougous JD.

PLoS Pathog. 2010 Aug 26;6(8):e1001068. doi: 10.1371/journal.ppat.1001068.

12.

Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence.

Kulasekara BR, Jacobs M, Zhou Y, Wu Z, Sims E, Saenphimmachak C, Rohmer L, Ritchie JM, Radey M, McKevitt M, Freeman TL, Hayden H, Haugen E, Gillett W, Fong C, Chang J, Beskhlebnaya V, Waldor MK, Samadpour M, Whittam TS, Kaul R, Brittnacher M, Miller SI.

Infect Immun. 2009 Sep;77(9):3713-21. doi: 10.1128/IAI.00198-09. Epub 2009 Jun 29.

13.

Genome-wide screen in Francisella novicida for genes required for pulmonary and systemic infection in mice.

Kraemer PS, Mitchell A, Pelletier MR, Gallagher LA, Wasnick M, Rohmer L, Brittnacher MJ, Manoil C, Skerett SJ, Salama NR.

Infect Immun. 2009 Jan;77(1):232-44. doi: 10.1128/IAI.00978-08. Epub 2008 Oct 27.

14.

Large-insert genome analysis technology detects structural variation in Pseudomonas aeruginosa clinical strains from cystic fibrosis patients.

Hayden HS, Gillett W, Saenphimmachak C, Lim R, Zhou Y, Jacobs MA, Chang J, Rohmer L, D'Argenio DA, Palmieri A, Levy R, Haugen E, Wong GK, Brittnacher MJ, Burns JL, Miller SI, Olson MV, Kaul R.

Genomics. 2008 Jun;91(6):530-7. doi: 10.1016/j.ygeno.2008.02.005. Epub 2008 Apr 29.

15.

Determination and comparison of the Francisella tularensis subsp.novicida U112 proteome to other bacterial proteomes.

Rohmer L, Guina T, Chen J, Gallis B, Taylor GK, Shaffer SA, Miller SI, Brittnacher MJ, Goodlett DR.

J Proteome Res. 2008 May;7(5):2016-24. doi: 10.1021/pr700760z. Epub 2008 Apr 2.

PMID:
18380474
16.

PSAT: a web tool to compare genomic neighborhoods of multiple prokaryotic genomes.

Fong C, Rohmer L, Radey M, Wasnick M, Brittnacher MJ.

BMC Bioinformatics. 2008 Mar 26;9:170. doi: 10.1186/1471-2105-9-170.

17.

A Francisella mutant in lipid A carbohydrate modification elicits protective immunity.

Kanistanon D, Hajjar AM, Pelletier MR, Gallagher LA, Kalhorn T, Shaffer SA, Goodlett DR, Rohmer L, Brittnacher MJ, Skerrett SJ, Ernst RK.

PLoS Pathog. 2008 Feb 8;4(2):e24. doi: 10.1371/journal.ppat.0040024.

18.

MglA regulates Francisella tularensis subsp. novicida (Francisella novicida) response to starvation and oxidative stress.

Guina T, Radulovic D, Bahrami AJ, Bolton DL, Rohmer L, Jones-Isaac KA, Chen J, Gallagher LA, Gallis B, Ryu S, Taylor GK, Brittnacher MJ, Manoil C, Goodlett DR.

J Bacteriol. 2007 Sep;189(18):6580-6. Epub 2007 Jul 20.

19.

Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.

Rohmer L, Fong C, Abmayr S, Wasnick M, Larson Freeman TJ, Radey M, Guina T, Svensson K, Hayden HS, Jacobs M, Gallagher LA, Manoil C, Ernst RK, Drees B, Buckley D, Haugen E, Bovee D, Zhou Y, Chang J, Levy R, Lim R, Gillett W, Guenthener D, Kang A, Shaffer SA, Taylor G, Chen J, Gallis B, D'Argenio DA, Forsman M, Olson MV, Goodlett DR, Kaul R, Miller SI, Brittnacher MJ.

Genome Biol. 2007;8(6):R102.

20.

Potential source of Francisella tularensis live vaccine strain attenuation determined by genome comparison.

Rohmer L, Brittnacher M, Svensson K, Buckley D, Haugen E, Zhou Y, Chang J, Levy R, Hayden H, Forsman M, Olson M, Johansson A, Kaul R, Miller SI.

Infect Immun. 2006 Dec;74(12):6895-906. Epub 2006 Sep 25.

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Knowing the dancer from the dance: R-gene products and their interactions with other proteins from host and pathogen.

Nimchuk Z, Rohmer L, Chang JH, Dangl JL.

Curr Opin Plant Biol. 2001 Aug;4(4):288-94. Review.

PMID:
11418337
25.

Tnt1 transposition events are induced by in vitro transformation of Arabidopsis thaliana, and transposed copies integrate into genes.

Courtial B, Feuerbach F, Eberhard S, Rohmer L, Chiapello H, Camilleri C, Lucas H.

Mol Genet Genomics. 2001 Mar;265(1):32-42.

PMID:
11370870

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