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Phenotypic and metabolic plasticity shapes life-history strategies under combinations of abiotic stresses.

Shaar-Moshe L, Hayouka R, Roessner U, Peleg Z.

Plant Direct. 2019 Jan 10;3(1):e00113. doi: 10.1002/pld3.113. eCollection 2019 Jan.


Roots of the Resurrection Plant Tripogon loliiformis Survive Desiccation Without the Activation of Autophagy Pathways by Maintaining Energy Reserves.

Asami P, Rupasinghe T, Moghaddam L, Njaci I, Roessner U, Mundree S, Williams B.

Front Plant Sci. 2019 Apr 25;10:459. doi: 10.3389/fpls.2019.00459. eCollection 2019.


Androgen receptor antagonism accelerates disease onset in the SOD1G93A mouse model of amyotrophic lateral sclerosis.

McLeod VM, Lau CL, Chiam MDF, Rupasinghe TW, Roessner U, Djouma E, Boon WC, Turner BJ.

Br J Pharmacol. 2019 Jul;176(13):2111-2130. doi: 10.1111/bph.14657. Epub 2019 May 23.


The PHO signaling pathway directs lipid remodeling in Cryptococcus neoformans via DGTS synthase to recycle phosphate during phosphate deficiency.

Lev S, Rupasinghe T, Desmarini D, Kaufman-Francis K, Sorrell TC, Roessner U, Djordjevic JT.

PLoS One. 2019 Feb 21;14(2):e0212651. doi: 10.1371/journal.pone.0212651. eCollection 2019.


Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat.

Casartelli A, Melino VJ, Baumann U, Riboni M, Suchecki R, Jayasinghe NS, Mendis H, Watanabe M, Erban A, Zuther E, Hoefgen R, Roessner U, Okamoto M, Heuer S.

Plant Mol Biol. 2019 Mar;99(4-5):477-497. doi: 10.1007/s11103-019-00831-z. Epub 2019 Feb 5.


Partner switching and metabolic flux in a model cnidarian-dinoflagellate symbiosis.

Matthews JL, Oakley CA, Lutz A, Hillyer KE, Roessner U, Grossman AR, Weis VM, Davy SK.

Proc Biol Sci. 2018 Nov 28;285(1892). pii: 20182336. doi: 10.1098/rspb.2018.2336.


RNA Catabolites Contribute to the Nitrogen Pool and Support Growth Recovery of Wheat.

Melino VJ, Casartelli A, George J, Rupasinghe T, Roessner U, Okamoto M, Heuer S.

Front Plant Sci. 2018 Nov 2;9:1539. doi: 10.3389/fpls.2018.01539. eCollection 2018.


A Golgi UDP-GlcNAc transporter delivers substrates for N-linked glycans and sphingolipids.

Ebert B, Rautengarten C, McFarlane HE, Rupasinghe T, Zeng W, Ford K, Scheller HV, Bacic A, Roessner U, Persson S, Heazlewood JL.

Nat Plants. 2018 Oct;4(10):792-801. doi: 10.1038/s41477-018-0235-5. Epub 2018 Sep 17.


Feeding the Walls: How Does Nutrient Availability Regulate Cell Wall Composition?

Ogden M, Hoefgen R, Roessner U, Persson S, Khan GA.

Int J Mol Sci. 2018 Sep 10;19(9). pii: E2691. doi: 10.3390/ijms19092691. Review.


Systems-based approaches enable identification of gene targets which improve the flavour profile of low-ethanol wine yeast strains.

Varela C, Schmidt SA, Borneman AR, Pang CNI, Krömerx JO, Khan A, Song X, Hodson MP, Solomon M, Mayr CM, Hines W, Pretorius IS, Baker MS, Roessner U, Mercurio M, Henschke PA, Wilkins MR, Chambers PJ.

Metab Eng. 2018 Sep;49:178-191. doi: 10.1016/j.ymben.2018.08.006. Epub 2018 Aug 20.


Best practice data life cycle approaches for the life sciences.

Griffin PC, Khadake J, LeMay KS, Lewis SE, Orchard S, Pask A, Pope B, Roessner U, Russell K, Seemann T, Treloar A, Tyagi S, Christiansen JH, Dayalan S, Gladman S, Hangartner SB, Hayden HL, Ho WWH, Keeble-Gagnère G, Korhonen PK, Neish P, Prestes PR, Richardson MF, Watson-Haigh NS, Wyres KL, Young ND, Schneider MV.

Version 2. F1000Res. 2017 Aug 31 [revised 2018 Jan 1];6:1618. doi: 10.12688/f1000research.12344.2. eCollection 2017.


Structural and functional measures of marine microbial communities: An experiment to assess implications for oil spill management.

Morris L, O'Brien A, Natera SHA, Lutz A, Roessner U, Long SM.

Mar Pollut Bull. 2018 Jun;131(Pt A):525-529. doi: 10.1016/j.marpolbul.2018.04.054. Epub 2018 May 1.


Water availability moderates N2 fixation benefit from elevated [CO2 ]: A 2-year free-air CO2 enrichment study on lentil (Lens culinaris MEDIK.) in a water limited agroecosystem.

Parvin S, Uddin S, Bourgault M, Roessner U, Tausz-Posch S, Armstrong R, O'Leary G, Fitzgerald G, Tausz M.

Plant Cell Environ. 2018 Oct;41(10):2418-2434. doi: 10.1111/pce.13360. Epub 2018 Jul 16.


A high-resolution HPLC-QqTOF platform using parallel reaction monitoring for in-depth lipid discovery and rapid profiling.

Yu D, Rupasinghe TWT, Boughton BA, Natera SHA, Hill CB, Tarazona P, Feussner I, Roessner U.

Anal Chim Acta. 2018 Oct 5;1026:87-100. doi: 10.1016/j.aca.2018.03.062. Epub 2018 Apr 18.


Single cell-type analysis of cellular lipid remodelling in response to salinity in the epidermal bladder cells of the model halophyte Mesembryanthemum crystallinum.

Barkla BJ, Garibay-Hernández A, Melzer M, Rupasinghe TWT, Roessner U.

Plant Cell Environ. 2018 Oct;41(10):2390-2403. doi: 10.1111/pce.13352. Epub 2018 Jul 3.


Comparative metabolic and ionomic profiling of two cultivars of Stevia rebaudiana Bert. (Bertoni) grown under salinity stress.

Debnath M, Ashwath N, Hill CB, Callahan DL, Dias DA, Jayasinghe NS, Midmore DJ, Roessner U.

Plant Physiol Biochem. 2018 Aug;129:56-70. doi: 10.1016/j.plaphy.2018.05.001. Epub 2018 May 10.


Quantification of Sugars and Organic Acids in Biological Matrices Using GC-QqQ-MS.

Jayasinghe NS, Mendis H, Roessner U, Dias DA.

Methods Mol Biol. 2018;1778:207-223. doi: 10.1007/978-1-4939-7819-9_15.


Extraction of Plant Lipids for LC-MS-Based Untargeted Plant Lipidomics.

Rupasinghe TWT, Roessner U.

Methods Mol Biol. 2018;1778:125-135. doi: 10.1007/978-1-4939-7819-9_9.


High-mass-resolution MALDI mass spectrometry imaging reveals detailed spatial distribution of metabolites and lipids in roots of barley seedlings in response to salinity stress.

Sarabia LD, Boughton BA, Rupasinghe T, van de Meene AML, Callahan DL, Hill CB, Roessner U.

Metabolomics. 2018;14(5):63. doi: 10.1007/s11306-018-1359-3. Epub 2018 Apr 19.


Dietary intervention rescues myopathy associated with neurofibromatosis type 1.

Summers MA, Rupasinghe T, Vasiljevski ER, Evesson FJ, Mikulec K, Peacock L, Quinlan KG, Cooper ST, Roessner U, Stevenson DA, Little DG, Schindeler A.

Hum Mol Genet. 2018 Feb 15;27(4):577-588. doi: 10.1093/hmg/ddx423.


13C metabolomics reveals widespread change in carbon fate during coral bleaching.

Hillyer KE, Dias D, Lutz A, Roessner U, Davy SK.

Metabolomics. 2017 Dec 12;14(1):12. doi: 10.1007/s11306-017-1306-8.


Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis.

Matthews JL, Crowder CM, Oakley CA, Lutz A, Roessner U, Meyer E, Grossman AR, Weis VM, Davy SK.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):13194-13199. doi: 10.1073/pnas.1710733114. Epub 2017 Nov 20. Erratum in: Proc Natl Acad Sci U S A. 2017 Dec 11;:.


Epidermal bladder cells confer salinity stress tolerance in the halophyte quinoa and Atriplex species.

Kiani-Pouya A, Roessner U, Jayasinghe NS, Lutz A, Rupasinghe T, Bazihizina N, Bohm J, Alharbi S, Hedrich R, Shabala S.

Plant Cell Environ. 2017 Sep;40(9):1900-1915. doi: 10.1111/pce.12995. Epub 2017 Jul 18.


From common to rare Zingiberaceae plants - A metabolomics study using GC-MS.

Barbosa GB, Jayasinghe NS, Natera SHA, Inutan ED, Peteros NP, Roessner U.

Phytochemistry. 2017 Aug;140:141-150. doi: 10.1016/j.phytochem.2017.05.002. Epub 2017 May 9.


Corrigendum: The genome of Chenopodium quinoa.

Jarvis DE, Ho YS, Lightfoot DJ, Schmöckel SM, Li B, Borm TJA, Ohyanagi H, Mineta K, Michell CT, Saber N, Kharbatia NM, Rupper RR, Sharp AR, Dally N, Boughton BA, Woo YH, Gao G, Schijlen EGWM, Guo X, Momin AA, Negrão S, Al-Babili S, Gehring C, Roessner U, Jung C, Murphy K, Arold ST, Gojobori T, van der Linden CG, van Loo EN, Jellen EN, Maughan PJ, Tester M.

Nature. 2017 May 25;545(7655):510. doi: 10.1038/nature22384. Epub 2017 May 10.


Diurnal Changes in Transcript and Metabolite Levels during the Iron Deficiency Response of Rice.

Selby-Pham J, Lutz A, Moreno-Moyano LT, Boughton BA, Roessner U, Johnson AAT.

Rice (N Y). 2017 Dec;10(1):14. doi: 10.1186/s12284-017-0152-7. Epub 2017 Apr 20.


Mapping carbon fate during bleaching in a model cnidarian symbiosis: the application of 13 C metabolomics.

Hillyer KE, Dias DA, Lutz A, Roessner U, Davy SK.

New Phytol. 2017 Jun;214(4):1551-1562. doi: 10.1111/nph.14515. Epub 2017 Mar 8.


The genome of Chenopodium quinoa.

Jarvis DE, Ho YS, Lightfoot DJ, Schmöckel SM, Li B, Borm TJ, Ohyanagi H, Mineta K, Michell CT, Saber N, Kharbatia NM, Rupper RR, Sharp AR, Dally N, Boughton BA, Woo YH, Gao G, Schijlen EG, Guo X, Momin AA, Negrão S, Al-Babili S, Gehring C, Roessner U, Jung C, Murphy K, Arold ST, Gojobori T, Linden CG, van Loo EN, Jellen EN, Maughan PJ, Tester M.

Nature. 2017 Feb 16;542(7641):307-312. doi: 10.1038/nature21370. Epub 2017 Feb 8. Erratum in: Nature. 2017 May 25;545(7655):510.


Transition from a maternal to external nitrogen source in maize seedlings.

Sabermanesh K, Holtham LR, George J, Roessner U, Boughton BA, Heuer S, Tester M, Plett DC, Garnett TP.

J Integr Plant Biol. 2017 Apr;59(4):261-274. doi: 10.1111/jipb.12525.


A Quantitative Profiling Method of Phytohormones and Other Metabolites Applied to Barley Roots Subjected to Salinity Stress.

Cao D, Lutz A, Hill CB, Callahan DL, Roessner U.

Front Plant Sci. 2017 Jan 10;7:2070. doi: 10.3389/fpls.2016.02070. eCollection 2016.


MASTR-MS: a web-based collaborative laboratory information management system (LIMS) for metabolomics.

Hunter A, Dayalan S, De Souza D, Power B, Lorrimar R, Szabo T, Nguyen T, O'Callaghan S, Hack J, Pyke J, Nahid A, Barrero R, Roessner U, Likic V, Tull D, Bacic A, McConville M, Bellgard M.

Metabolomics. 2017;13(2):14. doi: 10.1007/s11306-016-1142-2. Epub 2016 Dec 27.


Cell-Type-Specific H+-ATPase Activity in Root Tissues Enables K+ Retention and Mediates Acclimation of Barley (Hordeum vulgare) to Salinity Stress.

Shabala L, Zhang J, Pottosin I, Bose J, Zhu M, Fuglsang AT, Velarde-Buendia A, Massart A, Hill CB, Roessner U, Bacic A, Wu H, Azzarello E, Pandolfi C, Zhou M, Poschenrieder C, Mancuso S, Shabala S.

Plant Physiol. 2016 Dec;172(4):2445-2458. Epub 2016 Oct 21.


De novo transcriptome assembly and analysis of differentially expressed genes of two barley genotypes reveal root-zone-specific responses to salt exposure.

Hill CB, Cassin A, Keeble-Gagnère G, Doblin MS, Bacic A, Roessner U.

Sci Rep. 2016 Aug 16;6:31558. doi: 10.1038/srep31558.


Nitrogen assimilation system in maize is regulated by developmental and tissue-specific mechanisms.

Plett D, Holtham L, Baumann U, Kalashyan E, Francis K, Enju A, Toubia J, Roessner U, Bacic A, Rafalski A, Dhugga KS, Tester M, Garnett T, Kaiser BN.

Plant Mol Biol. 2016 Oct;92(3):293-312. doi: 10.1007/s11103-016-0512-5. Epub 2016 Aug 10.


Mass spectrometry imaging for plant biology: a review.

Boughton BA, Thinagaran D, Sarabia D, Bacic A, Roessner U.

Phytochem Rev. 2016;15:445-488. Epub 2015 Oct 13. Review.


Determination of amino acids in urine of patients with prostate cancer and benign prostate growth.

Sroka WD, Boughton BA, Reddy P, Roessner U, Słupski P, Jarzemski P, Dąbrowska A, Markuszewski MJ, Marszałł MP.

Eur J Cancer Prev. 2017 Mar;26(2):131-134. doi: 10.1097/CEJ.0000000000000248.


Root spatial metabolite profiling of two genotypes of barley (Hordeum vulgare L.) reveals differences in response to short-term salt stress.

Shelden MC, Dias DA, Jayasinghe NS, Bacic A, Roessner U.

J Exp Bot. 2016 Jun;67(12):3731-45. doi: 10.1093/jxb/erw059. Epub 2016 Mar 5.


Inactivation of Mitochondrial Complex I Induces the Expression of a Twin Cysteine Protein that Targets and Affects Cytosolic, Chloroplastidic and Mitochondrial Function.

Wang Y, Lyu W, Berkowitz O, Radomiljac JD, Law SR, Murcha MW, Carrie C, Teixeira PF, Kmiec B, Duncan O, Van Aken O, Narsai R, Glaser E, Huang S, Roessner U, Millar AH, Whelan J.

Mol Plant. 2016 May 2;9(5):696-710. doi: 10.1016/j.molp.2016.01.009. Epub 2016 Jan 29.


A new peak detection algorithm for MALDI mass spectrometry data based on a modified Asymmetric Pseudo-Voigt model.

Wijetunge CD, Saeed I, Boughton BA, Roessner U, Halgamuge SK.

BMC Genomics. 2015;16 Suppl 12:S12. doi: 10.1186/1471-2164-16-S12-S12. Epub 2015 Dec 9.


Beta-glucan-depleted, glycopeptide-rich extracts from Brewer's and Baker's yeast (Saccharomyces cerevisiae) lower interferon-gamma production by stimulated human blood cells in vitro.

Williams R, Dias DA, Jayasinghe N, Roessner U, Bennett LE.

Food Chem. 2016 Apr 15;197(Pt A):761-8. doi: 10.1016/j.foodchem.2015.11.015. Epub 2015 Nov 10.


2015: an eventful year for the Metabolomics Society.

Roessner U, Bearden D.

Metabolomics. 2015 Dec;11(6):1475-1477. doi: 10.1007/s11306-015-0865-9. Epub 2015 Oct 6. No abstract available.


Metabolomics, Standards, and Metabolic Modeling for Synthetic Biology in Plants.

Hill CB, Czauderna T, Klapperstück M, Roessner U, Schreiber F.

Front Bioeng Biotechnol. 2015 Oct 21;3:167. doi: 10.3389/fbioe.2015.00167. eCollection 2015. Review.


Quantitative profiling of polar primary metabolites of two chickpea cultivars with contrasting responses to salinity.

Dias DA, Hill CB, Jayasinghe NS, Atieno J, Sutton T, Roessner U.

J Chromatogr B Analyt Technol Biomed Life Sci. 2015 Sep 1;1000:1-13. doi: 10.1016/j.jchromb.2015.07.002. Epub 2015 Jul 13.


EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data.

Wijetunge CD, Saeed I, Boughton BA, Spraggins JM, Caprioli RM, Bacic A, Roessner U, Halgamuge SK.

Bioinformatics. 2015 Oct 1;31(19):3198-206. doi: 10.1093/bioinformatics/btv356. Epub 2015 Jun 10.


Metabolic profiling of a transgenic Caenorhabditis elegans Alzheimer model.

Van Assche R, Temmerman L, Dias DA, Boughton B, Boonen K, Braeckman BP, Schoofs L, Roessner U.

Metabolomics. 2015;11(2):477-486. Epub 2014 Jul 30.


Non-protein amino acids in Australian acacia seed: implications for food security and recommended processing methods to reduce djenkolic acid.

Boughton BA, Reddy P, Boland MP, Roessner U, Yates P.

Food Chem. 2015 Jul 15;179:109-15. doi: 10.1016/j.foodchem.2015.01.072. Epub 2015 Jan 20.


Detection of QTL for metabolic and agronomic traits in wheat with adjustments for variation at genetic loci that affect plant phenology.

Hill CB, Taylor JD, Edwards J, Mather D, Langridge P, Bacic A, Roessner U.

Plant Sci. 2015 Apr;233:143-154. doi: 10.1016/j.plantsci.2015.01.008. Epub 2015 Jan 29.


Flicker light-induced retinal vasodilation is unaffected by inhibition of epoxyeicosatrienoic acids and prostaglandins in humans.

Noonan JE, Dusting GJ, Nguyen TT, Jenkins AJ, Man RE, Best WJ, Dias DA, Jayasinghe NS, Roessner U, Lamoureux EL.

Invest Ophthalmol Vis Sci. 2014 Oct 8;55(10):7007-13. doi: 10.1167/iovs.14-14947.


LC-MS profiling to link metabolic and phenotypic diversity in plant mapping populations.

Hill CB, Bacic A, Roessner U.

Methods Mol Biol. 2014;1198:29-41. doi: 10.1007/978-1-4939-1258-2_3.


Metabolite profiling of wheat (Triticum aestivum L.) phloem exudate.

Palmer LJ, Dias DA, Boughton B, Roessner U, Graham RD, Stangoulis JC.

Plant Methods. 2014 Aug 15;10:27. doi: 10.1186/1746-4811-10-27. eCollection 2014.

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