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Items: 19

1.

A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network.

Williamson CHD, Stone NE, Nunnally AE, Hornstra HM, Wagner DM, Roe CC, Vazquez AJ, Nandurkar N, Vinocur J, Terriquez J, Gillece J, Travis J, Lemmer D, Keim P, Sahl JW.

Microb Genom. 2019 Jul;5(7). doi: 10.1099/mgen.0.000271. Epub 2019 May 20.

2.

Diversity, Virulence, and Antimicrobial Resistance in Isolates From the Newly Emerging Klebsiella pneumoniae ST101 Lineage.

Roe CC, Vazquez AJ, Esposito EP, Zarrilli R, Sahl JW.

Front Microbiol. 2019 Apr 2;10:542. doi: 10.3389/fmicb.2019.00542. eCollection 2019.

3.

Utility of Whole-Genome Sequencing to Ascertain Locally Acquired Cases of Coccidioidomycosis, Washington, USA.

Oltean HN, Etienne KA, Roe CC, Gade L, McCotter OZ, Engelthaler DM, Litvintseva AP.

Emerg Infect Dis. 2019 Mar;25(3):501-506. doi: 10.3201/eid2503.181155.

4.

Update on the Epidemiology of coccidioidomycosis in the United States.

McCotter OZ, Benedict K, Engelthaler DM, Komatsu K, Lucas KD, Mohle-Boetani JC, Oltean H, Vugia D, Chiller TM, Sondermeyer Cooksey GL, Nguyen A, Roe CC, Wheeler C, Sunenshine R.

Med Mycol. 2019 Feb 1;57(Supplement_1):S30-S40. doi: 10.1093/mmy/myy095. Review.

PMID:
30690599
5.

Timing the Origin of Cryptococcus gattii sensu stricto, Southeastern United States.

Lockhart SR, Roe CC, Engelthaler DM.

Emerg Infect Dis. 2018 Nov;24(11):2095-2097. doi: 10.3201/eid2411.180975.

6.

Improved Subtyping of Staphylococcus aureus Clonal Complex 8 Strains Based on Whole-Genome Phylogenetic Analysis.

Bowers JR, Driebe EM, Albrecht V, McDougal LK, Granade M, Roe CC, Lemmer D, Rasheed JK, Engelthaler DM, Keim P, Limbago BM.

mSphere. 2018 May 2;3(3). pii: e00464-17. doi: 10.1128/mSphere.00464-17. eCollection 2018 May-Jun.

7.

Flucytosine resistance in Cryptococcus gattii is indirectly mediated by the FCY2-FCY1-FUR1 pathway.

Vu K, Thompson GR 3rd, Roe CC, Sykes JE, Dreibe EM, Lockhart SR, Meyer W, Engelthaler DM, Gelli A.

Med Mycol. 2018 Oct 1;56(7):857-867. doi: 10.1093/mmy/myx135.

PMID:
29554336
8.

Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest.

Roe CC, Bowers J, Oltean H, DeBess E, Dufresne PJ, McBurney S, Overy DP, Wanke B, Lysen C, Chiller T, Meyer W, Thompson GR 3rd, Lockhart SR, Hepp CM, Engelthaler DM.

mSphere. 2018 Jan 17;3(1). pii: e00499-17. doi: 10.1128/mSphere.00499-17. eCollection 2018 Jan-Feb.

9.

Whole genome SNP typing to investigate methicillin-resistant Staphylococcus aureus carriage in a health-care provider as the source of multiple surgical site infections.

Roe CC, Horn KS, Driebe EM, Bowers J, Terriquez JA, Keim P, Engelthaler DM.

Hereditas. 2016 Nov 14;153:11. doi: 10.1186/s41065-016-0017-x. eCollection 2016.

10.

MLST and Whole-Genome-Based Population Analysis of Cryptococcus gattii VGIII Links Clinical, Veterinary and Environmental Strains, and Reveals Divergent Serotype Specific Sub-populations and Distant Ancestors.

Firacative C, Roe CC, Malik R, Ferreira-Paim K, Escandón P, Sykes JE, Castañón-Olivares LR, Contreras-Peres C, Samayoa B, Sorrell TC, Castañeda E, Lockhart SR, Engelthaler DM, Meyer W.

PLoS Negl Trop Dis. 2016 Aug 5;10(8):e0004861. doi: 10.1371/journal.pntd.0004861. eCollection 2016 Aug.

11.

Whole-Genome Analysis of Cryptococcus gattii, Southeastern United States.

Lockhart SR, Roe CC, Engelthaler DM.

Emerg Infect Dis. 2016 Jun;22(6):1098-101. doi: 10.3201/eid2206.151455.

12.

Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever.

Engelthaler DM, Roe CC, Hepp CM, Teixeira M, Driebe EM, Schupp JM, Gade L, Waddell V, Komatsu K, Arathoon E, Logemann H, Thompson GR 3rd, Chiller T, Barker B, Keim P, Litvintseva AP.

MBio. 2016 Apr 26;7(2):e00550-16. doi: 10.1128/mBio.00550-16.

13.

Whole-Genome Sequencing to Determine Origin of Multinational Outbreak of Sarocladium kiliense Bloodstream Infections.

Etienne KA, Roe CC, Smith RM, Vallabhaneni S, Duarte C, Escadon P, Castaneda E, Gomez BL, de Bedout C, López LF, Salas V, Hederra LM, Fernandez J, Pidal P, Hormazabel JC, Otaiza F, Vannberg FO, Gillece J, Lemmer D, Driebe EM, Englethaler DM, Litvintseva AP.

Emerg Infect Dis. 2016 Mar;22(3):476-81. doi: 10.3201/eid2203.151193.

14.

Mapping the Evolution of Hypervirulent Klebsiella pneumoniae.

Struve C, Roe CC, Stegger M, Stahlhut SG, Hansen DS, Engelthaler DM, Andersen PS, Driebe EM, Keim P, Krogfelt KA.

MBio. 2015 Jul 21;6(4):e00630. doi: 10.1128/mBio.00630-15.

15.

Comparative analysis of subtyping methods against a whole-genome-sequencing standard for Salmonella enterica serotype Enteritidis.

Deng X, Shariat N, Driebe EM, Roe CC, Tolar B, Trees E, Keim P, Zhang W, Dudley EG, Fields PI, Engelthaler DM.

J Clin Microbiol. 2015 Jan;53(1):212-8. doi: 10.1128/JCM.02332-14. Epub 2014 Nov 5.

16.

Transmission of methicillin-resistant Staphylococcus aureus infection through solid organ transplantation: confirmation via whole genome sequencing.

Wendt JM, Kaul D, Limbago BM, Ramesh M, Cohle S, Denison AM, Driebe EM, Rasheed JK, Zaki SR, Blau DM, Paddock CD, McDougal LK, Engelthaler DM, Keim PS, Roe CC, Akselrod H, Kuehnert MJ, Basavaraju SV.

Am J Transplant. 2014 Nov;14(11):2633-9. doi: 10.1111/ajt.12898. Epub 2014 Sep 22.

17.

Cryptococcus gattii in North American Pacific Northwest: whole-population genome analysis provides insights into species evolution and dispersal.

Engelthaler DM, Hicks ND, Gillece JD, Roe CC, Schupp JM, Driebe EM, Gilgado F, Carriconde F, Trilles L, Firacative C, Ngamskulrungroj P, Castañeda E, Lazera Mdos S, Melhem MS, Pérez-Bercoff A, Huttley G, Sorrell TC, Voelz K, May RC, Fisher MC, Thompson GR 3rd, Lockhart SR, Keim P, Meyer W.

MBio. 2014 Jul 15;5(4):e01464-14. doi: 10.1128/mBio.01464-14.

18.

Coccidioides immitis identified in soil outside of its known range - Washington, 2013.

Marsden-Haug N, Hill H, Litvintseva AP, Engelthaler DM, Driebe EM, Roe CC, Ralston C, Hurst S, Goldoft M, Gade L, Wohrle R, Thompson GR, Brandt ME, Chiller T; Centers for Disease Control and Prevention (CDC).

MMWR Morb Mortal Wkly Rep. 2014 May 23;63(20):450.

19.

Effect of extension of infarction on serial CK activity.

Cobb FR, Irvin RG, Hagerty RC, Roe CC.

Circulation. 1979 Jul;60(1):145-54.

PMID:
445717

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