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Items: 43

1.

Comparative Genomic Analysis Confirms Five Genetic Populations of the Select Agent, Rathayibacter toxicus.

Yasuhara-Bell J, Arif M, Busot GY, Mann R, Rodoni B, Stack JP.

Microorganisms. 2020 Mar 5;8(3). pii: E366. doi: 10.3390/microorganisms8030366.

2.

Updating the Quarantine Status of Prunus Infecting Viruses in Australia.

Kinoti WM, Nancarrow N, Dann A, Rodoni BC, Constable FE.

Viruses. 2020 Feb 23;12(2). pii: E246. doi: 10.3390/v12020246.

3.

Genome Sequence and Phylogeny of a Bean Yellow Mosaic Virus Isolate Obtained from a 14-Year-Old Australian Lentil Sample.

Maina S, Zheng L, King S, Aftab M, Nancarrow N, Trębicki P, Rodoni B.

Microbiol Resour Announc. 2020 Jan 9;9(2). pii: e01437-19. doi: 10.1128/MRA.01437-19.

4.

Sensitivity and specificity of metatranscriptomics as an arbovirus surveillance tool.

Batovska J, Mee PT, Lynch SE, Sawbridge TI, Rodoni BC.

Sci Rep. 2019 Dec 18;9(1):19398. doi: 10.1038/s41598-019-55741-3.

5.

Coding-Complete Sequences of Barley Virus G Isolates from Australia, Obtained from a 34-Year-Old and a 1-Year-Old Sample.

Nancarrow N, Maina S, Zheng L, Aftab M, Freeman A, Kinoti WM, Rodoni B, Trębicki P.

Microbiol Resour Announc. 2019 Nov 21;8(47). pii: e01292-19. doi: 10.1128/MRA.01292-19.

6.

Effects of a Potato Spindle Tuber Viroid Tomato Strain on the Symptoms, Biomass, and Yields of Classical Indicator and Currently Grown Potato and Tomato Cultivars.

Mackie AE, Barbetti MJ, Rodoni B, McKirdy SJ, Jones RAC.

Plant Dis. 2019 Dec;103(12):3009-3017. doi: 10.1094/PDIS-02-19-0312-RE. Epub 2019 Sep 25.

PMID:
31567060
7.

Evaluation of loop-mediated isothermal amplification (LAMP) assay for detection of aprV2 positive Dichelobacter nodosus in-field by secondary users.

Best N, Rodoni B, Rawlin G, Beddoe T.

BMC Res Notes. 2019 Aug 22;12(1):534. doi: 10.1186/s13104-019-4575-7.

8.

Effect of Muscle Quality on Operative and Nonoperative Treatment of Rotator Cuff Tears.

Naimark M, Trinh T, Robbins C, Rodoni B, Carpenter J, Bedi A, Miller B.

Orthop J Sports Med. 2019 Aug 5;7(8):2325967119863010. doi: 10.1177/2325967119863010. eCollection 2019 Aug.

9.

Metagenomic Analysis Reveals a Nearly Complete Genome Sequence of Alfalfa Mosaic Virus from a Field Pea in Australia.

Maina S, Zheng L, Kinoti WM, Aftab M, Nancarrow N, Trębicki P, King S, Constable F, Rodoni B.

Microbiol Resour Announc. 2019 Aug 1;8(31). pii: e00766-19. doi: 10.1128/MRA.00766-19.

10.

Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance.

Piper AM, Batovska J, Cogan NOI, Weiss J, Cunningham JP, Rodoni BC, Blacket MJ.

Gigascience. 2019 Aug 1;8(8). pii: giz092. doi: 10.1093/gigascience/giz092. Review.

11.

Validation of Genotyping by Sequencing Using Transcriptomics for Diversity and Application of Genomic Selection in Tetraploid Potato.

Caruana BM, Pembleton LW, Constable F, Rodoni B, Slater AT, Cogan NOI.

Front Plant Sci. 2019 May 29;10:670. doi: 10.3389/fpls.2019.00670. eCollection 2019.

12.

Genomic sequence analysis reveals diversity of Australian Xanthomonas species associated with bacterial leaf spot of tomato, capsicum and chilli.

Roach R, Mann R, Gambley CG, Chapman T, Shivas RG, Rodoni B.

BMC Genomics. 2019 Apr 23;20(1):310. doi: 10.1186/s12864-019-5600-x.

13.

Smartphone Use and Interest in a Spine Surgery Recovery Mobile Application Among Patients in a US Academic Neurosurgery Practice.

Nathan JK, Rodoni BM, Joseph JR, Smith BW, Park P.

Oper Neurosurg (Hagerstown). 2020 Jan 1;18(1):98-102. doi: 10.1093/ons/opz061.

PMID:
31001639
14.

Optimization of a Loop Mediated Isothermal Amplification (LAMP) Assay for In-Field Detection of Dichelobacter nodosus With aprV2 (VDN LAMP) in Victorian Sheep Flocks.

Best N, Rawlin G, Suter R, Rodoni B, Beddoe T.

Front Vet Sci. 2019 Mar 8;6:67. doi: 10.3389/fvets.2019.00067. eCollection 2019.

15.

Clinical Level of Evidence Presented at the Lumbar Spine Research Society (LSRS) Annual Meeting Over 10 Years (2008-2017): A Systematic Review.

Eyrich NW, Rodoni BM, Patel R, Aleem IS.

Spine (Phila Pa 1976). 2019 Aug 15;44(16):1170-1175. doi: 10.1097/BRS.0000000000003029.

PMID:
30882758
16.

Viroid-infected Tomato and Capsicum Seed Shipments to Australia.

Constable F, Chambers G, Penrose L, Daly A, Mackie J, Davis K, Rodoni B, Gibbs M.

Viruses. 2019 Jan 24;11(2). pii: E98. doi: 10.3390/v11020098.

17.

Prevalence and Incidence of Yellow Dwarf Viruses Across a Climatic Gradient: A Four-Year Field Study in Southeastern Australia.

Nancarrow N, Aftab M, Freeman A, Rodoni B, Hollaway G, Trębicki P.

Plant Dis. 2018 Dec;102(12):2465-2472. doi: 10.1094/PDIS-01-18-0116-RE. Epub 2018 Oct 10.

PMID:
30307836
18.

The development and deployment of a field-based loop mediated isothermal amplification assay for virulent Dichelobacter nodosus detection on Australian sheep.

Best N, Rodoni B, Rawlin G, Beddoe T.

PLoS One. 2018 Sep 27;13(9):e0204310. doi: 10.1371/journal.pone.0204310. eCollection 2018.

19.

The Incidence and Genetic Diversity of Apple Mosaic Virus (ApMV) and Prune Dwarf Virus (PDV) in Prunus Species in Australia.

Kinoti WM, Constable FE, Nancarrow N, Plummer KM, Rodoni B.

Viruses. 2018 Mar 19;10(3). pii: E136. doi: 10.3390/v10030136.

20.

Metagenomic arbovirus detection using MinION nanopore sequencing.

Batovska J, Lynch SE, Rodoni BC, Sawbridge TI, Cogan NO.

J Virol Methods. 2017 Nov;249:79-84. doi: 10.1016/j.jviromet.2017.08.019. Epub 2017 Sep 4.

21.

Generic Amplicon Deep Sequencing to Determine Ilarvirus Species Diversity in Australian Prunus.

Kinoti WM, Constable FE, Nancarrow N, Plummer KM, Rodoni B.

Front Microbiol. 2017 Jun 30;8:1219. doi: 10.3389/fmicb.2017.01219. eCollection 2017.

22.

Virus incidence in wheat increases under elevated CO2: A 4-year study of yellow dwarf viruses from a free air carbon dioxide facility.

Trębicki P, Nancarrow N, Bosque-Pérez NA, Rodoni B, Aftab M, Freeman A, Yen A, Fitzgerald GJ.

Virus Res. 2017 Sep 15;241:137-144. doi: 10.1016/j.virusres.2017.06.027. Epub 2017 Jul 4.

PMID:
28684156
23.

Analysis of intra-host genetic diversity of Prunus necrotic ringspot virus (PNRSV) using amplicon next generation sequencing.

Kinoti WM, Constable FE, Nancarrow N, Plummer KM, Rodoni B.

PLoS One. 2017 Jun 20;12(6):e0179284. doi: 10.1371/journal.pone.0179284. eCollection 2017.

24.

Preliminary evidence that age and sex affect exercise-induced hTERT expression.

Cluckey TG, Nieto NC, Rodoni BM, Traustadóttir T.

Exp Gerontol. 2017 Oct 1;96:7-11. doi: 10.1016/j.exger.2017.06.003. Epub 2017 Jun 3.

PMID:
28587932
25.

Novel 'Candidatus Liberibacter' species identified in the Australian eggplant psyllid, Acizzia solanicola.

Morris J, Shiller J, Mann R, Smith G, Yen A, Rodoni B.

Microb Biotechnol. 2017 Jul;10(4):833-844. doi: 10.1111/1751-7915.12707. Epub 2017 Apr 7.

26.

Emergence of a New Population of Rathayibacter toxicus: An Ecologically Complex, Geographically Isolated Bacterium.

Arif M, Busot GY, Mann R, Rodoni B, Liu S, Stack JP.

PLoS One. 2016 May 24;11(5):e0156182. doi: 10.1371/journal.pone.0156182. eCollection 2016.

27.

Potato spindle tuber viroid: Stability on Common Surfaces and Inactivation With Disinfectants.

Mackie AE, Coutts BA, Barbetti MJ, Rodoni BC, McKirdy SJ, Jones RAC.

Plant Dis. 2015 Jun;99(6):770-775. doi: 10.1094/PDIS-09-14-0929-RE. Epub 2015 May 15.

PMID:
30699527
28.

Virus disease in wheat predicted to increase with a changing climate.

Trębicki P, Nancarrow N, Cole E, Bosque-Pérez NA, Constable FE, Freeman AJ, Rodoni B, Yen AL, Luck JE, Fitzgerald GJ.

Glob Chang Biol. 2015 Sep;21(9):3511-9. doi: 10.1111/gcb.12941. Epub 2015 Jun 8.

PMID:
25846559
29.

Novel genus-specific broad range primers for the detection of furoviruses, hordeiviruses and rymoviruses and their application in field surveys in South-East Australia.

Zheng L, Tang J, Clover GR, Spackman ME, Freeman AJ, Rodoni BC.

J Virol Methods. 2015 Mar;214:1-9. doi: 10.1016/j.jviromet.2014.11.022. Epub 2014 Dec 10.

PMID:
25497413
30.

The effect of elevated temperature on Barley yellow dwarf virus-PAV in wheat.

Nancarrow N, Constable FE, Finlay KJ, Freeman AJ, Rodoni BC, Trebicki P, Vassiliadis S, Yen AL, Luck JE.

Virus Res. 2014 Jun 24;186:97-103. doi: 10.1016/j.virusres.2013.12.023. Epub 2013 Dec 25.

PMID:
24374266
31.

First Report of Pepper chat fruit viroid in Traded Tomato Seed, an Interception by Australian Biosecurity.

Chambers GA, Seyb AM, Mackie J, Constable FE, Rodoni BC, Letham D, Davis K, Gibbs MJ.

Plant Dis. 2013 Oct;97(10):1386. doi: 10.1094/PDIS-03-13-0293-PDN.

PMID:
30722159
32.

Biosecurity implications of new technology and discovery in plant virus research.

MacDiarmid R, Rodoni B, Melcher U, Ochoa-Corona F, Roossinck M.

PLoS Pathog. 2013;9(8):e1003337. doi: 10.1371/journal.ppat.1003337. Epub 2013 Aug 1. Review.

33.

Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved core.

Mann RA, Smits TH, Bühlmann A, Blom J, Goesmann A, Frey JE, Plummer KM, Beer SV, Luck J, Duffy B, Rodoni B.

PLoS One. 2013;8(2):e55644. doi: 10.1371/journal.pone.0055644. Epub 2013 Feb 7.

34.

Enhanced stabilization of the Tobacco mosaic virus using protic ionic liquids.

Byrne N, Rodoni B, Constable F, Varghese S, Davis JH Jr.

Phys Chem Chem Phys. 2012 Aug 7;14(29):10119-21. doi: 10.1039/c2cp41625e. Epub 2012 Jun 27.

PMID:
22735595
35.

Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.

Rezzonico F, Braun-Kiewnick A, Mann RA, Rodoni B, Goesmann A, Duffy B, Smits TH.

Mol Plant Pathol. 2012 Oct;13(8):975-84. doi: 10.1111/j.1364-3703.2012.00807.x. Epub 2012 May 15.

36.

Comparative analysis of the Hrp pathogenicity island of Rubus- and Spiraeoideae-infecting Erwinia amylovora strains identifies the IT region as a remnant of an integrative conjugative element.

Mann RA, Blom J, Bühlmann A, Plummer KM, Beer SV, Luck JE, Goesmann A, Frey JE, Rodoni BC, Duffy B, Smits TH.

Gene. 2012 Aug 1;504(1):6-12. doi: 10.1016/j.gene.2012.05.002. Epub 2012 May 11.

PMID:
22579880
37.

Genome sequence of an Erwinia amylovora strain with pathogenicity restricted to Rubus plants.

Powney R, Smits TH, Sawbridge T, Frey B, Blom J, Frey JE, Plummer KM, Beer SV, Luck J, Duffy B, Rodoni B.

J Bacteriol. 2011 Feb;193(3):785-6. doi: 10.1128/JB.01352-10. Epub 2010 Dec 3.

38.

The role of plant biosecurity in preventing and controlling emerging plant virus disease epidemics.

Rodoni B.

Virus Res. 2009 May;141(2):150-7. doi: 10.1016/j.virusres.2008.11.019. Epub 2009 Jan 17.

PMID:
19152816
39.

Characterization of Apricot pseudo-chlorotic leaf spot virus, A Novel Trichovirus Isolated from Stone Fruit Trees.

Liberti D, Marais A, Svanella-Dumas L, Dulucq MJ, Alioto D, Ragozzino A, Rodoni B, Candresse T.

Phytopathology. 2005 Apr;95(4):420-6. doi: 10.1094/PHYTO-95-0420.

40.

Quantitative PCR measurements of the effects of introducing inosines into primers provides guidelines for improved degenerate primer design.

Zheng L, Gibbs MJ, Rodoni BC.

J Virol Methods. 2008 Nov;153(2):97-103. doi: 10.1016/j.jviromet.2008.07.029. Epub 2008 Sep 17.

PMID:
18760305
41.

Accumulating variation at conserved sites in potyvirus genomes is driven by species discovery and affects degenerate primer design.

Zheng L, Wayper PJ, Gibbs AJ, Fourment M, Rodoni BC, Gibbs MJ.

PLoS One. 2008 Feb 13;3(2):e1586. doi: 10.1371/journal.pone.0001586.

43.

Identification and Characterization of Banana Bract Mosaic Virus in India.

Rodoni BC, Ahlawat YS, Varma A, Dale JL, Harding RM.

Plant Dis. 1997 Jun;81(6):669-672. doi: 10.1094/PDIS.1997.81.6.669.

PMID:
30861856

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