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Items: 1 to 50 of 86

1.

MsPAC: A tool for haplotype-phased structural variant detection.

Rodriguez OL, Ritz A, Sharp AJ, Bashir A.

Bioinformatics. 2019 Aug 9. pii: btz618. doi: 10.1093/bioinformatics/btz618. [Epub ahead of print]

PMID:
31397844
2.

Invasive ductal carcinoma detected within a fibroadenolipoma through digital breast tomosynthesis.

Forte S, Ritz A, Kubik-Huch R, Leo C.

Acta Radiol Open. 2019 Jul 25;8(7):2058460119865905. doi: 10.1177/2058460119865905. eCollection 2019 Jul.

3.

Network-based prediction of polygenic disease genes involved in cell motility.

Bern M, King A, Applewhite DA, Ritz A.

BMC Bioinformatics. 2019 Jun 20;20(Suppl 12):313. doi: 10.1186/s12859-019-2834-1.

4.

Erratum: Directly Detecting MeV-Scale Dark Matter via Solar Reflection [Phys. Rev. Lett. 120, 141801 (2018)].

An H, Pospelov M, Pradler J, Ritz A.

Phys Rev Lett. 2018 Dec 21;121(25):259903. doi: 10.1103/PhysRevLett.121.259903.

PMID:
30608838
5.

A Cell-based Assay to Investigate Non-muscle Myosin II Contractility via the Folded-gastrulation Signaling Pathway in Drosophila S2R+ Cells.

Peters KA, Detmar E, Sepulveda L, Del Valle C, Valsquier R, Ritz A, Rogers SL, Applewhite DA.

J Vis Exp. 2018 Aug 19;(138). doi: 10.3791/58325.

6.

Directly Detecting MeV-Scale Dark Matter Via Solar Reflection.

An H, Pospelov M, Pradler J, Ritz A.

Phys Rev Lett. 2018 Apr 6;120(14):141801. doi: 10.1103/PhysRevLett.120.141801. Erratum in: Phys Rev Lett. 2018 Dec 21;121(25):259903.

PMID:
29694128
7.

Metabolic reprogramming ensures cancer cell survival despite oncogenic signaling blockade.

Lue HW, Podolak J, Kolahi K, Cheng L, Rao S, Garg D, Xue CH, Rantala JK, Tyner JW, Thornburg KL, Martinez-Acevedo A, Liu JJ, Amling CL, Truillet C, Louie SM, Anderson KE, Evans MJ, O'Donnell VB, Nomura DK, Drake JM, Ritz A, Thomas GV.

Genes Dev. 2017 Oct 15;31(20):2067-2084. doi: 10.1101/gad.305292.117. Epub 2017 Nov 14.

8.

Pathway Analysis with Signaling Hypergraphs.

Ritz A, Avent B, Murali TM.

IEEE/ACM Trans Comput Biol Bioinform. 2017 Sep-Oct;14(5):1042-1055. doi: 10.1109/TCBB.2015.2459681.

9.

GraphSpace: stimulating interdisciplinary collaborations in network biology.

Bharadwaj A, Singh DP, Ritz A, Tegge AN, Poirel CL, Kraikivski P, Adames N, Luther K, Kale SD, Peccoud J, Tyson JJ, Murali TM.

Bioinformatics. 2017 Oct 1;33(19):3134-3136. doi: 10.1093/bioinformatics/btx382.

10.

Corrigendum: Pathway on demand: automated reconstruction of human signaling networks.

Ritz A, Poirel CL, Tegge AN, Sharp N, Simmons K, Powell A, Kale SD, Murali TM.

NPJ Syst Biol Appl. 2016 Nov 17;2:16026. doi: 10.1038/npjsba.2016.26. eCollection 2016.

11.

Enhancing Adherence to Care in the HIV Care Continuum: The Barrier Elimination and Care Navigation (BEACON) Project Evaluation.

Shacham E, López JD, Brown TM, Tippit K, Ritz A.

AIDS Behav. 2018 Jan;22(1):258-264. doi: 10.1007/s10461-017-1819-1.

PMID:
28597342
12.

A facility to search for hidden particles at the CERN SPS: the SHiP physics case.

Alekhin S, Altmannshofer W, Asaka T, Batell B, Bezrukov F, Bondarenko K, Boyarsky A, Choi KY, Corral C, Craig N, Curtin D, Davidson S, de Gouvêa A, Dell'Oro S, deNiverville P, Bhupal Dev PS, Dreiner H, Drewes M, Eijima S, Essig R, Fradette A, Garbrecht B, Gavela B, Giudice GF, Goodsell MD, Gorbunov D, Gori S, Grojean C, Guffanti A, Hambye T, Hansen SH, Helo JC, Hernandez P, Ibarra A, Ivashko A, Izaguirre E, Jaeckel J, Jeong YS, Kahlhoefer F, Kahn Y, Katz A, Kim CS, Kovalenko S, Krnjaic G, Lyubovitskij VE, Marcocci S, Mccullough M, McKeen D, Mitselmakher G, Moch SO, Mohapatra RN, Morrissey DE, Ovchynnikov M, Paschos E, Pilaftsis A, Pospelov M, Reno MH, Ringwald A, Ritz A, Roszkowski L, Rubakov V, Ruchayskiy O, Schienbein I, Schmeier D, Schmidt-Hoberg K, Schwaller P, Senjanovic G, Seto O, Shaposhnikov M, Shchutska L, Shelton J, Shrock R, Shuve B, Spannowsky M, Spray A, Staub F, Stolarski D, Strassler M, Tello V, Tramontano F, Tripathi A, Tulin S, Vissani F, Winkler MW, Zurek KM.

Rep Prog Phys. 2016 Dec;79(12):124201. Epub 2016 Oct 24.

PMID:
27775925
13.

Pathways on demand: automated reconstruction of human signaling networks.

Ritz A, Poirel CL, Tegge AN, Sharp N, Simmons K, Powell A, Kale SD, Murali TM.

NPJ Syst Biol Appl. 2016 Mar 3;2:16002. doi: 10.1038/npjsba.2016.2. eCollection 2016. Erratum in: NPJ Syst Biol Appl. 2016 Nov 17;2:16026.

14.

Visual-perceptual impairment in children with cerebral palsy: a systematic review.

Ego A, Lidzba K, Brovedani P, Belmonti V, Gonzalez-Monge S, Boudia B, Ritz A, Cans C.

Dev Med Child Neurol. 2015 Apr;57 Suppl 2:46-51. doi: 10.1111/dmcn.12687. Review.

15.

Characterization of structural variants with single molecule and hybrid sequencing approaches.

Ritz A, Bashir A, Sindi S, Hsu D, Hajirasouliha I, Raphael BJ.

Bioinformatics. 2014 Dec 15;30(24):3458-66. doi: 10.1093/bioinformatics/btu714. Epub 2014 Oct 28.

16.

Signaling hypergraphs.

Ritz A, Tegge AN, Kim H, Poirel CL, Murali TM.

Trends Biotechnol. 2014 Jul;32(7):356-62. doi: 10.1016/j.tibtech.2014.04.007. Epub 2014 May 22.

17.

The prion-like domain in the exomer-dependent cargo Pin2 serves as a trans-Golgi retention motif.

Ritz AM, Trautwein M, Grassinger F, Spang A.

Cell Rep. 2014 Apr 10;7(1):249-60. doi: 10.1016/j.celrep.2014.02.026. Epub 2014 Mar 20.

18.

Characterization of surrogate parameters for blood pressure regulation in neurally-mediated syncope.

Couceiro R, Carvalho P, Paiva RP, Muehlsteff J, Henriques J, Schulze V, Ritz A, Kelm M, Meyer C.

Conf Proc IEEE Eng Med Biol Soc. 2013;2013:5381-5. doi: 10.1109/EMBC.2013.6610765.

PMID:
24110952
19.

Detection of hemodynamic adaptations during impending syncope: implementation of a robust algorithm based on pulse arrival time measurements only.

Muehlsteff J, Correia T, Couceiro R, Carvalho P, Ritz A, Eickholt C, Kelm M, Meyer C.

Conf Proc IEEE Eng Med Biol Soc. 2013;2013:2291-4. doi: 10.1109/EMBC.2013.6609995.

PMID:
24110182
20.

Hemodynamic Surrogate Measures Symplifying Neurally Mediated Syncope Management.

Muehlsteff J, Eickholt C, Ritz A, Schulze V, Kelm M, Meyer C.

Biomed Tech (Berl). 2013 Aug;58 Suppl 1. pii: /j/bmte.2013.58.issue-s1-I/bmt-2013-4215/bmt-2013-4215.xml. doi: 10.1515/bmt-2013-4215. Epub 2013 Sep 7. No abstract available.

PMID:
24042869
21.

Improved methods for reprogramming human dermal fibroblasts using fluorescence activated cell sorting.

Kahler DJ, Ahmad FS, Ritz A, Hua H, Moroziewicz DN, Sproul AA, Dusenberry CR, Shang L, Paull D, Zimmer M, Weiss KA, Egli D, Noggle SA.

PLoS One. 2013;8(3):e59867. doi: 10.1371/journal.pone.0059867. Epub 2013 Mar 29.

22.

Pulse Arrival Time as surrogate for systolic blood pressure changes during impending neurally mediated syncope.

Muehlsteff J, Ritz A, Drexel T, Eickholt C, Carvalho P, Couceiro R, Kelm M, Meyer C.

Conf Proc IEEE Eng Med Biol Soc. 2012;2012:4283-6. doi: 10.1109/EMBC.2012.6346913.

PMID:
23366874
23.

Quantitative phosphoproteomics reveals SLP-76 dependent regulation of PAG and Src family kinases in T cells.

Cao L, Ding Y, Hung N, Yu K, Ritz A, Raphael BJ, Salomon AR.

PLoS One. 2012;7(10):e46725. doi: 10.1371/journal.pone.0046725. Epub 2012 Oct 11.

24.

The complex interactions of Chs5p, the ChAPs, and the cargo Chs3p.

Rockenbauch U, Ritz AM, Sacristan C, Roncero C, Spang A.

Mol Biol Cell. 2012 Nov;23(22):4402-15. doi: 10.1091/mbc.E11-12-1015. Epub 2012 Sep 26.

25.

Towards hydrodynamics without an entropy current.

Jensen K, Kaminski M, Kovtun P, Meyer R, Ritz A, Yarom A.

Phys Rev Lett. 2012 Sep 7;109(10):101601. Epub 2012 Sep 5.

PMID:
23005277
26.

Vagal heart rate control in patients with atrial fibrillation: impact of tonic activation of peripheral chemosensory function in heart failure.

Drexel T, Eickholt C, Mühlsteff J, Ritz A, Siekiera M, Kirmanoglou K, Schulze V, Shin DI, Balzer J, Rassaf T, Kelm M, Meyer C.

Adv Exp Med Biol. 2013;755:287-97.

PMID:
22826079
27.

Reconstructing cancer genomes from paired-end sequencing data.

Oesper L, Ritz A, Aerni SJ, Drebin R, Raphael BJ.

BMC Bioinformatics. 2012 Apr 19;13 Suppl 6:S10. doi: 10.1186/1471-2105-13-S6-S10.

28.

Revealing the neural response to imperceptible peripheral flicker with machine learning.

Porbadnigk AK, Scholler S, Blankertz B, Ritz A, Born M, Scholl R, Muller KR, Curio G, Treder MS.

Conf Proc IEEE Eng Med Biol Soc. 2011;2011:3692-5. doi: 10.1109/IEMBS.2011.6090625.

PMID:
22255141
29.

Ventricular tachycardia and sudden death after primary PCI-reperfusion therapy: impact on primary prevention of sudden cardiac death.

Paranskaya L, Akin I, Chatterjee T, Ritz A, Paranski P, Rehders T, Ince H, Schneider H, Nienaber CA, Bänsch D.

Herzschrittmacherther Elektrophysiol. 2011 Dec;22(4):243-8. doi: 10.1007/s00399-011-0160-z.

PMID:
22124800
30.

Integrated genomics of ovarian xenograft tumor progression and chemotherapy response.

Stuckey A, Fischer A, Miller DH, Hillenmeyer S, Kim KK, Ritz A, Singh RK, Raphael BJ, Brard L, Brodsky AS.

BMC Cancer. 2011 Jul 22;11:308. doi: 10.1186/1471-2407-11-308.

31.

Detection of recurrent rearrangement breakpoints from copy number data.

Ritz A, Paris PL, Ittmann MM, Collins C, Raphael BJ.

BMC Bioinformatics. 2011 Apr 21;12:114. doi: 10.1186/1471-2105-12-114.

32.

NOA1 is an essential GTPase required for mitochondrial protein synthesis.

Kolanczyk M, Pech M, Zemojtel T, Yamamoto H, Mikula I, Calvaruso MA, van den Brand M, Richter R, Fischer B, Ritz A, Kossler N, Thurisch B, Spoerle R, Smeitink J, Kornak U, Chan D, Vingron M, Martasek P, Lightowlers RN, Nijtmans L, Schuelke M, Nierhaus KH, Mundlos S.

Mol Biol Cell. 2011 Jan 1;22(1):1-11. doi: 10.1091/mbc.E10-07-0643. Epub 2010 Nov 30.

33.

Gremlin: an interactive visualization model for analyzing genomic rearrangements.

O'Brien TM, Ritz AM, Raphael BJ, Laidlaw DH.

IEEE Trans Vis Comput Graph. 2010 Nov-Dec;16(6):918-26. doi: 10.1109/TVCG.2010.163.

PMID:
20975128
34.

Structural variation analysis with strobe reads.

Ritz A, Bashir A, Raphael BJ.

Bioinformatics. 2010 May 15;26(10):1291-8. doi: 10.1093/bioinformatics/btq153. Epub 2010 Apr 8.

PMID:
20378554
35.

Pseudoscalar perturbations and polarization of the cosmic microwave background.

Pospelov M, Ritz A, Skordis C.

Phys Rev Lett. 2009 Jul 31;103(5):051302. Epub 2009 Jul 30.

PMID:
19792483
36.

A new approach for quantitative phosphoproteomic dissection of signaling pathways applied to T cell receptor activation.

Nguyen V, Cao L, Lin JT, Hung N, Ritz A, Yu K, Jianu R, Ulin SP, Raphael BJ, Laidlaw DH, Brossay L, Salomon AR.

Mol Cell Proteomics. 2009 Nov;8(11):2418-31. doi: 10.1074/mcp.M800307-MCP200. Epub 2009 Jul 14.

37.

A 7-year longitudinal follow-up of intellectual development in children with congenital hemiplegia.

Gonzalez-Monge S, Boudia B, Ritz A, Abbas-Chorfa F, Rabilloud M, Iwaz J, Bérard C.

Dev Med Child Neurol. 2009 Dec;51(12):959-67. doi: 10.1111/j.1469-8749.2009.03339.x. Epub 2009 May 11.

38.

Discovery of phosphorylation motif mixtures in phosphoproteomics data.

Ritz A, Shakhnarovich G, Salomon AR, Raphael BJ.

Bioinformatics. 2009 Jan 1;25(1):14-21. doi: 10.1093/bioinformatics/btn569. Epub 2008 Nov 7.

39.

[Positive influence on cardiovascular risk factor by blocking the endocannabinoid system].

Chatterjee T, Ritz A, Ince H, Nienaber ChA, Rehders TC.

Praxis (Bern 1994). 2008 May 28;97(11):613-21. German.

PMID:
18592956
40.

Black holes and universality classes of critical points.

Kovtun P, Ritz A.

Phys Rev Lett. 2008 May 2;100(17):171606. Epub 2008 Apr 30.

PMID:
18518276
41.

Quantitative time-resolved phosphoproteomic analysis of mast cell signaling.

Cao L, Yu K, Banh C, Nguyen V, Ritz A, Raphael BJ, Kawakami Y, Kawakami T, Salomon AR.

J Immunol. 2007 Nov 1;179(9):5864-76.

42.

Guidelines for Quality Management of Apallic Syndrome / Vegetative State.

von Wild K, Gerstenbrand F, Dolce G, Binder H, Vos PE, Saltuari L, Alekseenko Y, Formisano R, Ritz A, Ortega-Suhrkamp E, Jörg JR, Potapov AA, León-Carrión J, Vilcinis R, Zitnay GA.

Eur J Trauma Emerg Surg. 2007 Jun;33(3):268-92. doi: 10.1007/s00068-007-6138-1. Epub 2007 Apr 21.

PMID:
26814491
43.

[Life experience of adults with unilateral agenesia of the forearm: effect of prosthesis on self image and social relations].

Choumon B, Fischer S, Greco J, Ritz A, Bérard C.

Rev Chir Orthop Reparatrice Appar Mot. 2006 Feb;92(1):27-32. French.

PMID:
16609614
44.

Flavor- and CP-violating physics from new supersymmetric thresholds.

Pospelov M, Ritz A, Santoso Y.

Phys Rev Lett. 2006 Mar 10;96(9):091801. Epub 2006 Mar 7.

PMID:
16606253
45.

Initiation of hypertension treatment with a fixed-dose combination or its monocomponents -- does it really matter?

Scholze J, Bida M, Hansen A, Juncken D, Rangoonwala B, Ritz A, Schnitker J, Dörffel Y.

Int J Clin Pract. 2006 Mar;60(3):265-74.

PMID:
16494640
46.

Percutaneous transcatheter closure of patent foramen ovale.

Chatterjee T, Ritz A, Rehders TC, Ince H, Kische S, Petzsch M, Nienaber CA.

Minerva Cardioangiol. 2006 Feb;54(1):31-9. Review.

PMID:
16467740
47.

Enrolling research subjects from clinical practice: ethical and procedural issues in the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) trial.

Alpert JE, Biggs MM, Davis L, Shores-Wilson K, Harlan WR, Schneider GW, Ford AL, Farabaugh A, Stegman D, Ritz AL, Husain MM, Macleod L, Wisniewski SR, Rush AJ; STAR*D Investigators.

Psychiatry Res. 2006 Feb 28;141(2):193-200. Epub 2006 Feb 2.

PMID:
16457894
48.

Malaria and asymptomatic parasitaemia in Gabonese infants under the age of 3 months.

Klein Klouwenberg PM, Oyakhirome S, Schwarz NG, Gläser B, Issifou S, Kiessling G, Klöpfer A, Kremsner PG, Längin M, Lassmann B, Necek M, Pötschke M, Ritz A, Grobusch MP.

Acta Trop. 2005 Aug;95(2):81-5.

PMID:
15950165
49.

Methods of testing feasibility for sequenced treatment alternatives to relieve depression (STAR*D).

Wisniewski SR, Stegman D, Trivedi M, Husain MM, Eng H, Shores-Wilson K, Luther J, Biggs MM, Burroughs D, Ritz AL, Fava M, Quitkin F, Rush AJ; STAR*D Investigators.

J Psychiatr Res. 2004 May-Jun;38(3):241-8.

PMID:
15003429
50.

Sensorimotor recovery in children after traumatic brain injury: analyses of gait, gross motor, and fine motor skills.

Kuhtz-Buschbeck JP, Hoppe B, Gölge M, Dreesmann M, Damm-Stünitz U, Ritz A.

Dev Med Child Neurol. 2003 Dec;45(12):821-8.

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