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Items: 1 to 50 of 63

1.

Corrigendum to "Immune modulatory properties of 6-gingerol and resveratrol in Atlantic salmon macrophages" [Mol. Immunol. 95 (2018) 10-19].

Smith NC, Christian SL, Taylor RG, Santander J, Rise ML.

Mol Immunol. 2018 Nov 5. pii: S0161-5890(18)30899-X. doi: 10.1016/j.molimm.2018.10.018. [Epub ahead of print] No abstract available.

PMID:
30409438
2.

Changes in the liver transcriptome of farmed Atlantic salmon (Salmo salar) fed experimental diets based on terrestrial alternatives to fish meal and fish oil.

Caballero-Solares A, Xue X, Parrish CC, Foroutani MB, Taylor RG, Rise ML.

BMC Genomics. 2018 Nov 3;19(1):796. doi: 10.1186/s12864-018-5188-6.

3.

Minimizing marine ingredients in diets of farmed Atlantic salmon (Salmo salar): Effects on growth performance and muscle lipid and fatty acid composition.

Beheshti Foroutani M, Parrish CC, Wells J, Taylor RG, Rise ML, Shahidi F.

PLoS One. 2018 Sep 21;13(9):e0198538. doi: 10.1371/journal.pone.0198538. eCollection 2018.

4.

Immune modulatory properties of 6-gingerol and resveratrol in Atlantic salmon macrophages.

Smith NC, Christian SL, Taylor RG, Santander J, Rise ML.

Mol Immunol. 2018 Mar;95:10-19. doi: 10.1016/j.molimm.2018.01.004. Epub 2018 Feb 2. Erratum in: Mol Immunol. 2018 Nov 5;:.

PMID:
29367081
5.

Discovery of microRNAs associated with the antiviral immune response of Atlantic cod macrophages.

Eslamloo K, Inkpen SM, Rise ML, Andreassen R.

Mol Immunol. 2018 Jan;93:152-161. doi: 10.1016/j.molimm.2017.11.015. Epub 2017 Nov 27.

PMID:
29190475
6.

Transcriptome profiling of antiviral immune and dietary fatty acid dependent responses of Atlantic salmon macrophage-like cells.

Eslamloo K, Xue X, Hall JR, Smith NC, Caballero-Solares A, Parrish CC, Taylor RG, Rise ML.

BMC Genomics. 2017 Sep 8;18(1):706. doi: 10.1186/s12864-017-4099-2.

7.

Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture.

Macqueen DJ, Primmer CR, Houston RD, Nowak BF, Bernatchez L, Bergseth S, Davidson WS, Gallardo-Escárate C, Goldammer T, Guiguen Y, Iturra P, Kijas JW, Koop BF, Lien S, Maass A, Martin SAM, McGinnity P, Montecino M, Naish KA, Nichols KM, Ólafsson K, Omholt SW, Palti Y, Plastow GS, Rexroad CE Rd, Rise ML, Ritchie RJ, Sandve SR, Schulte PM, Tello A, Vidal R, Vik JO, Wargelius A, Yáñez JM; FAASG Consortium.

BMC Genomics. 2017 Jun 27;18(1):484. doi: 10.1186/s12864-017-3862-8.

8.

The dietary replacement of marine ingredients by terrestrial animal and plant alternatives modulates the antiviral immune response of Atlantic salmon (Salmo salar).

Caballero-Solares A, Hall JR, Xue X, Eslamloo K, Taylor RG, Parrish CC, Rise ML.

Fish Shellfish Immunol. 2017 May;64:24-38. doi: 10.1016/j.fsi.2017.02.040. Epub 2017 Feb 24.

PMID:
28242361
9.

De novo assembly of Sockeye salmon kidney transcriptomes reveal a limited early response to piscine reovirus with or without infectious hematopoietic necrosis virus superinfection.

Polinski MP, Bradshaw JC, Inkpen SM, Richard J, Fritsvold C, Poppe TT, Rise ML, Garver KA, Johnson SC.

BMC Genomics. 2016 Nov 2;17(1):848.

10.

Successive Losses of Central Immune Genes Characterize the Gadiformes' Alternate Immunity.

Solbakken MH, Rise ML, Jakobsen KS, Jentoft S.

Genome Biol Evol. 2016 Dec 31;8(11):3508-3515. doi: 10.1093/gbe/evw250.

11.

Functional Genomic Analysis of the Impact of Camelina (Camelina sativa) Meal on Atlantic Salmon (Salmo salar) Distal Intestine Gene Expression and Physiology.

Brown TD, Hori TS, Xue X, Ye CL, Anderson DM, Rise ML.

Mar Biotechnol (NY). 2016 Jun;18(3):418-35. doi: 10.1007/s10126-016-9704-x. Epub 2016 Jun 2.

12.

Transcriptome profiling of the antiviral immune response in Atlantic cod macrophages.

Eslamloo K, Xue X, Booman M, Smith NC, Rise ML.

Dev Comp Immunol. 2016 Oct;63:187-205. doi: 10.1016/j.dci.2016.05.021. Epub 2016 May 30.

PMID:
27255218
13.
14.

Cold-induced changes in stress hormone and steroidogenic transcript levels in cunner (Tautogolabrus adspersus), a fish capable of metabolic depression.

Alzaid A, Hori TS, Hall JR, Rise ML, Gamperl AK.

Gen Comp Endocrinol. 2015 Dec 1;224:126-35. doi: 10.1016/j.ygcen.2015.07.007. Epub 2015 Jul 17.

PMID:
26188716
15.

Cloning and characterization of aquaglyceroporin genes from rainbow smelt (Osmerus mordax) and transcript expression in response to cold temperature.

Hall JR, Clow KA, Rise ML, Driedzic WR.

Comp Biochem Physiol B Biochem Mol Biol. 2015 Sep;187:39-54. doi: 10.1016/j.cbpb.2015.05.004. Epub 2015 May 14.

PMID:
25981700
16.

Structure-function relationships in histidine-rich antimicrobial peptides from Atlantic cod.

McDonald M, Mannion M, Pike D, Lewis K, Flynn A, Brannan AM, Browne MJ, Jackman D, Madera L, Power Coombs MR, Hoskin DW, Rise ML, Booth V.

Biochim Biophys Acta. 2015 Jul;1848(7):1451-61. doi: 10.1016/j.bbamem.2015.03.030. Epub 2015 Apr 1.

17.

Transcriptomic responses of Atlantic salmon (Salmo salar) to environmental enrichment during juvenile rearing.

Evans ML, Hori TS, Rise ML, Fleming IA.

PLoS One. 2015 Mar 5;10(3):e0118378. doi: 10.1371/journal.pone.0118378. eCollection 2015.

18.

Characterization and expression analyses of five interferon regulatory factor transcripts (Irf4a, Irf4b, Irf7, Irf8, Irf10) in Atlantic cod (Gadus morhua).

Inkpen SM, Hori TS, Gamperl AK, Nash GW, Rise ML.

Fish Shellfish Immunol. 2015 May;44(1):365-81. doi: 10.1016/j.fsi.2015.02.032. Epub 2015 Feb 28.

PMID:
25731920
19.

Atlantic salmon (Salmo salar) liver transcriptome response to diets containing Camelina sativa products.

Xue X, Hixson SM, Hori TS, Booman M, Parrish CC, Anderson DM, Rise ML.

Comp Biochem Physiol Part D Genomics Proteomics. 2015 Jun;14:1-15. doi: 10.1016/j.cbd.2015.01.005. Epub 2015 Feb 2.

PMID:
25681993
20.

Toxicological effect of single contaminants and contaminant mixtures associated with plant ingredients in novel salmon feeds.

Søfteland L, Kirwan JA, Hori TS, Størseth TR, Sommer U, Berntssen MH, Viant MR, Rise ML, Waagbø R, Torstensen BE, Booman M, Olsvik PA.

Food Chem Toxicol. 2014 Nov;73:157-74. doi: 10.1016/j.fct.2014.08.008. Epub 2014 Sep 2.

PMID:
25193261
21.

An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial.

Tuziak SM, Rise ML, Volkoff H.

Gene. 2014 Oct 25;550(2):253-63. doi: 10.1016/j.gene.2014.08.039. Epub 2014 Aug 21.

PMID:
25151310
22.

Characterization of the fatty acyl elongase (elovl) gene family, and hepatic elovl and delta-6 fatty acyl desaturase transcript expression and fatty acid responses to diets containing camelina oil in Atlantic cod (Gadus morhua).

Xue X, Feng CY, Hixson SM, Johnstone K, Anderson DM, Parrish CC, Rise ML.

Comp Biochem Physiol B Biochem Mol Biol. 2014 Sep;175:9-22. doi: 10.1016/j.cbpb.2014.06.005. Epub 2014 Jun 24.

PMID:
24970595
23.

Variation in embryonic mortality and maternal transcript expression among Atlantic cod (Gadus morhua) broodstock: a functional genomics study.

Rise ML, Nash GW, Hall JR, Booman M, Hori TS, Trippel EA, Gamperl AK.

Mar Genomics. 2014 Dec;18 Pt A:3-20. doi: 10.1016/j.margen.2014.05.004. Epub 2014 May 28.

24.

Evaluation of the impact of camelina oil-containing diets on the expression of genes involved in the innate anti-viral immune response in Atlantic cod (Gadus morhua).

Booman M, Xu Q, Rise ML.

Fish Shellfish Immunol. 2014 Nov;41(1):52-63. doi: 10.1016/j.fsi.2014.05.017. Epub 2014 May 27.

PMID:
24875009
25.

Identification of a gene set to evaluate the potential effects of loud sounds from seismic surveys on the ears of fishes: a study with Salmo salar.

Andrews CD, Payne JF, Rise ML.

J Fish Biol. 2014 Jun;84(6):1793-819. doi: 10.1111/jfb.12398. Epub 2014 May 9.

26.
27.

Family-specific differences in growth rate and hepatic gene expression in juvenile triploid growth hormone (GH) transgenic Atlantic salmon (Salmo salar).

Xu Q, Feng CY, Hori TS, Plouffe DA, Buchanan JT, Rise ML.

Comp Biochem Physiol Part D Genomics Proteomics. 2013 Dec;8(4):317-33. doi: 10.1016/j.cbd.2013.09.002. Epub 2013 Oct 5.

PMID:
24145116
28.

Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure.

Liu Q, Rise ML, Spitsbergen JM, Hori TS, Mieritz M, Geis S, McGraw JE, Goetz G, Larson J, Hutz RJ, Carvan MJ 3rd.

Aquat Toxicol. 2013 Sep 15;140-141:356-68. doi: 10.1016/j.aquatox.2013.06.018. Epub 2013 Jul 1.

29.

A moderate increase in ambient temperature modulates the Atlantic cod (Gadus morhua) spleen transcriptome response to intraperitoneal viral mimic injection.

Hori TS, Gamperl AK, Booman M, Nash GW, Rise ML.

BMC Genomics. 2012 Aug 28;13:431. doi: 10.1186/1471-2164-13-431.

30.

Dynamic expression profiles of virus-responsive and putative antimicrobial peptide-encoding transcripts during Atlantic cod (Gadus morhua) embryonic and early larval development.

Rise ML, Hall JR, Alcock BP, Hori TS.

Gene. 2012 Nov 10;509(2):232-46. doi: 10.1016/j.gene.2012.08.017. Epub 2012 Aug 19.

PMID:
22925828
31.

Expression analysis of glycerol synthesis-related liver transcripts in rainbow smelt (Osmerus mordax) exposed to a controlled decrease in temperature.

Hall JR, Short CE, Rise ML, Driedzic WR.

Physiol Biochem Zool. 2012 Jan-Feb;85(1):74-84. doi: 10.1086/663771. Epub 2011 Dec 14.

PMID:
22237291
32.

The mRNA expression of cortisol axis related genes differs in Atlantic cod (Gadus morhua) categorized as high or low responders.

Hori TS, Rise ML, Johnson SC, Afonso LO, Gamperl AK.

Gen Comp Endocrinol. 2012 Jan 15;175(2):311-20. doi: 10.1016/j.ygcen.2011.11.031. Epub 2011 Nov 29.

PMID:
22146795
33.

Identification and validation of differentially expressed transcripts in a hepatocyte model of cold-induced glycerol production in rainbow smelt (Osmerus mordax).

Hall JR, Clow KA, Rise ML, Driedzic WR.

Am J Physiol Regul Integr Comp Physiol. 2011 Oct;301(4):R995-R1010. doi: 10.1152/ajpregu.00210.2011. Epub 2011 Jul 6.

35.

Development and experimental validation of a 20K Atlantic cod (Gadus morhua) oligonucleotide microarray based on a collection of over 150,000 ESTs.

Booman M, Borza T, Feng CY, Hori TS, Higgins B, Culf A, Léger D, Chute IC, Belkaid A, Rise M, Gamperl AK, Hubert S, Kimball J, Ouellette RJ, Johnson SC, Bowman S, Rise ML.

Mar Biotechnol (NY). 2011 Aug;13(4):733-50. doi: 10.1007/s10126-010-9335-6. Epub 2010 Dec 3.

36.

Characterization and expression studies of Gaduscidin-1 and Gaduscidin-2; paralogous antimicrobial peptide-like transcripts from Atlantic cod (Gadus morhua).

Browne MJ, Feng CY, Booth V, Rise ML.

Dev Comp Immunol. 2011 Mar;35(3):399-408. doi: 10.1016/j.dci.2010.11.010. Epub 2010 Nov 30.

PMID:
21108964
37.

The fight between the teleost fish immune response and aquatic viruses.

Workenhe ST, Rise ML, Kibenge MJ, Kibenge FS.

Mol Immunol. 2010 Oct;47(16):2525-36. doi: 10.1016/j.molimm.2010.06.009. Epub 2010 Aug 24. Review.

PMID:
20797792
38.

Transcriptome responses to heat stress in the nucleated red blood cells of the rainbow trout (Oncorhynchus mykiss).

Lewis JM, Hori TS, Rise ML, Walsh PJ, Currie S.

Physiol Genomics. 2010 Aug;42(3):361-73. doi: 10.1152/physiolgenomics.00067.2010. Epub 2010 Jun 15.

PMID:
20551145
39.

Impact of asymptomatic nodavirus carrier state and intraperitoneal viral mimic injection on brain transcript expression in Atlantic cod (Gadus morhua).

Rise ML, Hall JR, Rise M, Hori TS, Browne MJ, Gamperl AK, Hubert S, Kimball J, Bowman S, Johnson SC.

Physiol Genomics. 2010 Jul 7;42(2):266-80. doi: 10.1152/physiolgenomics.00168.2009. Epub 2010 May 4.

PMID:
20442246
40.

An integrated approach to gene discovery and marker development in Atlantic cod (Gadus morhua).

Bowman S, Hubert S, Higgins B, Stone C, Kimball J, Borza T, Bussey JT, Simpson G, Kozera C, Curtis BA, Hall JR, Hori TS, Feng CY, Rise M, Booman M, Gamperl AK, Trippel E, Symonds J, Johnson SC, Rise ML.

Mar Biotechnol (NY). 2011 Apr;13(2):242-55. doi: 10.1007/s10126-010-9285-z. Epub 2010 Apr 16.

41.

Atlantic cod (Gadus morhua) CC chemokines: Diversity and expression analysis.

Borza T, Stone C, Rise ML, Bowman S, Johnson SC.

Dev Comp Immunol. 2010 Aug;34(8):904-13. doi: 10.1016/j.dci.2010.03.011. Epub 2010 Apr 14.

PMID:
20381521
42.

Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua) liver, head kidney and skeletal muscle using genomic techniques.

Hori TS, Gamperl AK, Afonso LO, Johnson SC, Hubert S, Kimball J, Bowman S, Rise ML.

BMC Genomics. 2010 Jan 28;11:72. doi: 10.1186/1471-2164-11-72.

43.

Characterization and expression analyses of anti-apoptotic Bcl-2-like genes NR-13, Mcl-1, Bcl-X1, and Bcl-X2 in Atlantic cod (Gadus morhua).

Feng CY, Rise ML.

Mol Immunol. 2010 Jan;47(4):763-84. doi: 10.1016/j.molimm.2009.10.011. Epub 2009 Nov 17.

PMID:
19923001
44.

Infectious salmon anaemia virus (ISAV) isolates induce distinct gene expression responses in the Atlantic salmon (Salmo salar) macrophage/dendritic-like cell line TO, assessed using genomic techniques.

Workenhe ST, Hori TS, Rise ML, Kibenge MJ, Kibenge FS.

Mol Immunol. 2009 Sep;46(15):2955-74. doi: 10.1016/j.molimm.2009.06.015. Epub 2009 Jul 18.

PMID:
19616850
45.

Stimulation of growth and changes in the hepatic transcriptome by 17beta-estradiol in the yellow perch (Perca flavescens).

Goetz FW, Rise ML, Rise M, Goetz GW, Binkowski F, Shepherd BS.

Physiol Genomics. 2009 Aug 7;38(3):261-80. doi: 10.1152/physiolgenomics.00069.2009. Epub 2009 Jun 23.

PMID:
19549814
46.

RNA viruses in the sea.

Lang AS, Rise ML, Culley AI, Steward GF.

FEMS Microbiol Rev. 2009 Mar;33(2):295-323. doi: 10.1111/j.1574-6976.2008.00132.x. Review.

47.

Identification and analysis of differentially expressed genes in immune tissues of Atlantic cod stimulated with formalin-killed, atypical Aeromonas salmonicida.

Feng CY, Johnson SC, Hori TS, Rise M, Hall JR, Gamperl AK, Hubert S, Kimball J, Bowman S, Rise ML.

Physiol Genomics. 2009 May 13;37(3):149-63. doi: 10.1152/physiolgenomics.90373.2008. Epub 2009 Feb 24.

PMID:
19240301
48.

Domestication and growth hormone transgenesis cause similar changes in gene expression in coho salmon (Oncorhynchus kisutch).

Devlin RH, Sakhrani D, Tymchuk WE, Rise ML, Goh B.

Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3047-52. doi: 10.1073/pnas.0809798106. Epub 2009 Feb 17.

49.

The immune and stress responses of Atlantic cod to long-term increases in water temperature.

Pérez-Casanova JC, Rise ML, Dixon B, Afonso LO, Hall JR, Johnson SC, Gamperl AK.

Fish Shellfish Immunol. 2008 May;24(5):600-9. doi: 10.1016/j.fsi.2008.01.012. Epub 2008 Feb 8.

PMID:
18343685
50.

Functional genomic analysis of the response of Atlantic cod (Gadus morhua) spleen to the viral mimic polyriboinosinic polyribocytidylic acid (pIC).

Rise ML, Hall J, Rise M, Hori T, Gamperl A, Kimball J, Hubert S, Bowman S, Johnson SC.

Dev Comp Immunol. 2008;32(8):916-31. doi: 10.1016/j.dci.2008.01.002. Epub 2008 Feb 7.

PMID:
18325588

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